Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-409K20.1 Gene 0 16.64 4.68 2.10 3.12 7.18 2.11 6.60 5.44 7.06 2.29 8.15 38.87 34.65 11.27 35.14 36.47 32.28 4.58 4.28 5.71 2.96 2.40 5.63 2 414926 Transcript 0 9.18 3.11 0.94 1.39 4.11 0.94 4.25 2.42 3.17 1.02 4.30 24.02 16.77 6.09 21.15 20.23 19.40 2.04 1.90 3.27 1.69 1.07 2.51 3 ER1a ExonRegion 0 7.99 4.64 0.00 0.00 4.11 0.00 5.93 0.00 0.09 0.00 3.00 30.31 6.02 4.85 24.86 18.01 22.71 0.00 0.00 3.27 1.68 0.00 0.00 4 E1_Da NovelBoundary 1 35.56 9.47 1.54 10.99 18.17 8.23 19.70 16.68 8.13 13.19 7.21 80.88 81.65 11.77 29.30 26.49 79.38 4.93 0.00 22.12 0.00 2.39 11.69 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 Ix Intron 0 28.61 16.34 4.42 5.84 22.72 4.83 18.32 9.41 7.82 6.02 10.44 63.48 60.74 12.81 41.17 46.24 40.45 4.32 2.91 9.49 2.49 3.92 7.50 7 Ix_SR1 SilentIntronRegion 0 34.12 18.22 5.76 7.39 24.31 6.04 22.84 14.17 10.44 8.80 10.69 95.57 65.06 13.24 36.20 41.38 42.53 3.41 0.47 11.21 2.42 4.34 4.55 8 Ix_AR1 ActiveIntronRegion 0 20.86 15.53 4.50 6.79 23.43 2.01 14.56 10.42 9.46 8.32 16.75 79.42 64.78 16.38 34.89 64.36 57.22 6.90 2.59 14.15 3.33 3.72 17.30 9 Ix_SR2 SilentIntronRegion 0 25.03 10.87 5.86 5.97 15.62 3.39 12.67 5.98 8.44 3.93 4.69 30.72 35.07 12.76 47.45 43.34 27.30 5.23 1.98 6.15 1.52 3.21 9.64 10 Ix_AR3 ActiveIntronRegion 0 24.51 14.03 4.05 3.00 20.44 3.61 13.37 8.88 3.17 3.79 7.62 42.67 41.19 9.34 50.46 41.74 30.90 3.85 1.57 6.81 3.26 3.08 7.96 11 Ix_SR3 SilentIntronRegion 0 34.37 14.48 1.04 2.89 29.75 5.75 20.00 4.40 3.15 0.97 8.26 41.58 82.30 11.98 36.86 46.57 39.54 2.35 5.45 4.85 2.51 0.59 8.37 12 Ix_AR4 ActiveIntronRegion 0 24.15 21.45 1.89 5.27 24.05 5.71 18.99 4.90 6.05 5.02 15.71 42.88 77.85 12.63 46.23 52.92 47.34 5.41 9.36 11.04 2.67 6.48 5.08 13 E2_Aa NovelBoundary 0 79.50 8.81 3.16 8.32 14.69 7.55 2.25 4.07 11.49 5.37 20.11 32.41 34.25 18.89 56.62 52.55 33.75 21.39 4.42 14.25 3.15 8.51 0.00 14 ER2a ExonRegion 0 19.55 4.69 2.81 4.16 8.22 2.82 6.83 7.27 9.40 3.07 9.89 41.75 44.28 13.43 38.61 42.69 35.50 6.12 5.71 6.53 3.39 3.20 7.53