Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-228B15.1 Gene 0 27.91 9.88 37.43 22.45 19.01 12.78 10.43 26.66 21.01 22.54 5.31 4.84 5.91 18.19 7.93 11.00 11.16 22.62 13.38 13.23 12.10 8.46 16.80 2 439298 Transcript 0 14.18 3.80 12.72 7.09 10.50 4.09 5.80 9.70 7.32 7.00 1.77 3.37 5.93 7.63 3.53 4.17 3.64 5.80 5.05 5.23 4.46 3.78 8.08 3 425991 Transcript 0 7.88 0.51 6.59 3.07 0.00 0.10 0.03 4.16 3.66 2.94 0.17 0.04 0.00 3.98 0.00 0.52 4.45 2.23 4.59 2.13 1.17 0.37 0.72 4 ER1a ExonRegion 0 33.64 13.23 54.31 31.57 23.75 18.00 12.44 37.35 30.23 34.20 8.02 4.22 4.07 26.05 10.58 16.22 15.68 35.59 20.34 17.58 16.35 10.56 21.45 5 E1_Da NovelBoundary 0 17.04 11.77 60.14 30.40 14.77 11.02 12.01 42.51 20.98 24.44 2.47 0.00 0.00 21.19 28.06 7.60 8.32 22.92 40.38 12.34 5.62 7.96 15.37 6 E1a_E2a KnownJunction 0 6.59 0.00 12.24 1.93 4.33 2.61 3.97 10.64 5.82 6.21 0.00 0.00 0.00 5.36 0.00 3.93 0.00 3.90 8.75 0.00 0.00 0.00 0.00 7 Ix Intron 0 26.85 7.84 23.62 23.99 23.30 16.42 13.01 24.99 16.95 25.09 6.49 3.20 6.47 18.73 11.91 17.75 10.68 26.39 22.98 11.91 14.52 8.29 24.11 8 Ix_AR1 ActiveIntronRegion 0 26.91 7.86 23.68 24.05 23.36 16.46 13.04 25.05 16.99 25.14 6.51 3.21 6.49 18.77 11.94 17.79 10.70 26.45 23.04 11.94 14.56 8.31 24.17 9 E2_Aa NovelBoundary 0 50.90 9.54 29.63 30.10 33.02 7.67 9.58 29.66 25.52 31.67 5.21 0.00 0.00 19.42 0.00 4.10 21.04 24.08 31.72 22.63 2.72 10.84 18.69 10 ER2a ExonRegion 0 27.94 7.29 19.43 6.75 17.32 10.52 12.64 11.45 11.64 13.59 1.99 5.51 14.07 17.85 4.40 4.92 8.47 10.90 14.70 9.46 3.41 1.07 13.41 11 E2_Da NovelBoundary 0 57.79 6.45 60.73 41.72 32.68 13.46 19.34 37.13 25.29 20.87 8.63 5.85 6.82 16.60 19.16 10.85 13.18 23.71 14.40 10.87 13.71 16.84 33.12 12 E2a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 4.16 0.00 2.25 0.00 3.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.13 0.00 0.00 0.00 13 Ix Intron 0 16.97 7.25 27.65 10.86 12.50 8.58 5.60 21.80 11.48 15.23 5.60 4.14 8.79 19.36 10.41 9.27 7.35 16.57 12.06 10.42 10.80 6.50 23.54 14 Ix_AR1 ActiveIntronRegion 0 17.03 7.28 27.78 10.90 12.56 8.61 5.63 21.89 11.53 15.29 5.61 4.16 8.82 19.45 10.46 9.31 7.38 16.65 12.11 10.47 10.83 6.52 23.65 15 E3_Aa NovelBoundary 0 19.56 5.39 10.88 4.63 3.40 5.68 9.58 5.91 8.83 4.14 2.63 0.00 0.00 0.00 0.00 11.54 0.00 15.67 13.55 3.20 4.76 0.00 0.00 16 ER3a ExonRegion 0 3.34 1.54 4.87 3.77 0.01 0.29 0.10 1.39 0.58 2.47 0.51 0.11 0.00 2.46 0.00 1.57 1.74 1.97 0.02 0.90 3.51 1.10 2.15 17 E3_Ab KnownBoundary 0 183.88 18.15 365.30 151.46 97.03 69.68 52.73 189.31 232.23 99.87 0.00 42.16 18.51 74.70 18.54 26.57 3.93 1.53 4.80 3.26 399.64 513.01 459.77 18 ER3b ExonRegion 0 12.73 0.19 12.47 7.99 3.76 3.15 2.54 5.26 6.94 4.57 2.53 2.75 2.47 3.67 0.12 5.42 7.54 9.39 2.45 3.25 7.27 0.00 0.63 19 E3a_E4a KnownJunction 0 20.30 0.00 14.90 5.43 0.00 0.00 0.00 8.54 10.42 6.34 0.00 0.00 0.00 9.48 0.00 0.00 11.59 4.73 8.94 5.50 0.00 0.00 0.00 20 E3_Db NovelBoundary 0 9.78 6.12 22.65 13.05 0.00 2.73 5.48 14.38 6.31 12.76 2.11 0.00 0.00 2.47 0.00 0.00 0.00 10.49 13.84 0.00 5.87 11.70 23.13 21 E3b_E4a KnownJunction 0 0.00 0.00 1.48 0.00 0.00 0.00 0.00 0.00 0.00 1.26 0.00 0.00 0.00 4.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER3c ExonRegion 0 5.29 0.00 4.29 4.09 0.00 0.00 0.00 0.00 1.85 2.29 1.93 0.00 3.52 4.47 2.18 5.94 3.30 5.54 0.00 0.00 4.96 0.00 0.00 23 E4_Aa NovelBoundary 0 22.37 5.99 24.16 17.91 10.78 7.55 3.97 12.36 3.36 20.09 0.00 0.00 12.99 16.66 18.17 3.25 4.68 16.00 0.00 2.81 5.99 6.06 12.04 24 ER4a ExonRegion 0 15.48 4.74 14.09 14.94 7.41 12.51 3.62 9.34 15.52 8.44 0.02 8.77 3.52 14.79 9.56 2.97 8.43 5.54 6.43 11.17 6.12 5.69 13.48 25 E4_Da NovelBoundary 0 9.19 0.00 23.45 10.92 4.24 5.17 4.06 8.95 9.90 12.60 5.32 0.00 0.00 2.47 0.00 0.00 13.56 10.65 8.94 6.46 2.35 0.00 4.10 26 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 E4a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 0.00 0.00 0.00 0.00 28 Ix Intron 0 22.83 2.99 8.06 0.00 3.94 5.40 7.14 5.05 7.22 5.03 0.00 3.50 3.79 9.51 10.63 7.29 1.62 5.40 9.37 6.26 10.81 10.22 12.96 29 Ix_AR1 ActiveIntronRegion 0 23.28 3.05 8.22 0.00 4.01 5.50 7.28 5.15 7.36 5.12 0.00 3.57 3.86 9.70 10.81 7.43 1.65 5.51 9.56 6.38 11.00 10.42 13.21 30 Ix_SR1 SilentIntronRegion 0 26.18 6.36 29.20 14.30 18.59 13.99 9.60 18.89 12.21 15.98 9.22 4.47 7.70 13.22 5.41 10.29 6.53 16.24 3.79 8.33 9.00 7.13 7.14 31 Ix Intron 0 26.59 6.91 25.64 14.41 16.61 11.39 9.20 19.04 12.24 9.10 3.14 3.39 1.71 13.20 8.43 10.54 4.88 7.87 20.25 8.49 6.19 6.15 9.98 32 Ix_SR1 SilentIntronRegion 0 26.67 6.93 25.72 14.45 16.65 11.42 9.23 19.09 12.28 9.12 3.15 3.40 1.72 13.24 8.45 10.58 4.89 7.90 20.31 8.52 6.21 6.17 10.01 33 E5_Aa NovelBoundary 0 125.58 202.27 71.94 83.37 186.25 118.40 136.55 78.29 68.43 68.12 57.54 24.46 41.23 38.26 37.46 120.40 84.71 79.92 100.43 111.60 64.00 36.92 115.15 34 ER5a ExonRegion 0 16.05 7.52 10.84 6.42 29.18 5.83 11.38 15.63 8.95 8.20 2.78 1.94 10.02 9.49 8.58 6.63 5.23 1.62 4.55 6.54 16.90 15.65 28.02 35 E5_Ab KnownBoundary 0 40.01 65.12 53.93 43.12 43.21 20.05 55.16 56.44 24.83 37.66 9.27 0.00 13.15 22.01 0.00 24.27 56.29 27.19 30.02 30.87 26.69 20.02 43.28 36 ER5b ExonRegion 0 13.76 7.73 23.70 12.37 11.90 7.92 10.60 21.69 9.46 8.72 2.89 3.62 7.18 7.87 5.39 7.42 8.92 12.31 4.81 9.52 11.58 10.18 11.64 37 E5_Da KnownBoundary 0 20.67 3.35 36.84 19.81 8.66 0.00 8.83 29.08 9.69 8.33 5.37 11.25 12.50 7.83 5.19 0.00 14.12 12.56 9.51 15.47 5.31 14.51 8.62 38 ER5c ExonRegion 0 17.53 5.25 16.48 7.99 14.34 1.40 6.78 8.75 4.92 2.23 3.17 13.96 17.43 13.04 10.39 6.52 6.40 4.16 6.32 9.59 5.03 8.49 17.84 39 E5_Db NovelBoundary 0 42.97 18.29 62.21 47.21 24.28 10.39 18.20 52.04 29.40 13.48 0.00 0.00 30.19 2.24 0.00 16.58 27.77 49.33 27.11 23.46 12.17 8.70 23.82 40 E5b_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 Ix Intron 0 30.31 13.50 14.00 14.19 30.83 6.41 19.42 10.79 10.92 11.34 1.35 6.49 7.32 4.77 3.28 11.42 2.31 0.00 7.79 8.18 0.77 8.01 9.23 42 Ix_SR1 SilentIntronRegion 0 30.31 13.50 14.00 14.19 30.83 6.41 19.42 10.79 10.92 11.34 1.35 6.49 7.32 4.77 3.28 11.42 2.31 0.00 7.79 8.18 0.77 8.01 9.23 43 E6_Aa NovelBoundary 0 26.82 11.38 18.42 24.67 84.80 4.83 44.78 35.69 18.58 16.87 2.47 7.50 6.82 9.18 10.01 7.78 4.77 0.00 4.33 8.56 5.44 14.14 12.04 44 ER6a ExonRegion 0 48.97 8.51 20.88 19.24 22.37 6.64 14.38 22.92 13.86 9.03 1.62 11.40 16.07 2.77 2.76 1.67 0.92 2.05 0.89 11.22 2.46 5.81 8.18