Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TOR2A Gene 0 23.31 16.23 28.31 14.90 14.18 22.88 13.71 41.05 22.49 35.31 40.68 7.30 11.76 45.82 50.90 31.34 26.04 31.91 22.05 22.95 16.11 7.83 7.88 2 458505 Transcript 0 0.00 0.00 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.13 0.43 0.00 0.00 2.71 1.29 0.00 0.00 1.23 0.00 0.24 0.00 0.00 0.00 3 373284 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 496460 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 472723 Transcript 0 5.79 7.50 5.95 3.37 3.59 6.36 3.68 11.46 8.51 9.76 6.77 1.84 1.24 8.69 5.40 5.05 4.52 7.73 6.15 8.26 2.19 1.57 2.23 6 373282 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 463577 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 373281 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 336067 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 493439 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 463256 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 494135 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 ER1a ExonRegion 0 0.00 0.00 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.13 0.43 0.00 0.00 2.71 1.29 0.00 0.00 1.23 0.00 0.24 0.00 0.00 0.00 14 E1_Af KnownBoundary 0 21.71 3.35 1.83 0.00 0.00 20.61 10.73 0.00 0.00 0.00 7.74 5.55 0.00 31.20 50.81 25.46 9.26 4.77 0.00 3.26 3.09 3.00 4.01 15 ER1b ExonRegion 0 2.12 1.53 2.45 0.00 0.00 0.00 2.65 0.00 1.24 2.29 3.87 0.00 0.00 8.12 17.41 8.17 0.00 1.85 0.00 2.13 0.00 0.00 1.47 16 ER1c ExonRegion 0 6.70 2.03 2.45 0.00 0.89 5.20 3.09 0.58 1.24 3.25 5.48 0.00 0.00 15.97 21.76 14.86 6.60 3.08 0.00 2.13 0.00 1.39 2.94 17 E1_Ag KnownBoundary 0 20.52 16.97 6.95 0.00 12.48 17.49 35.37 13.35 3.47 11.68 16.90 0.00 0.00 40.85 39.31 23.24 4.02 24.33 8.28 5.62 12.11 11.02 3.41 18 ER1d ExonRegion 0 10.58 5.79 2.45 0.00 2.68 9.17 11.51 3.86 2.09 5.12 5.80 0.00 0.00 31.73 32.58 19.66 9.90 3.70 0.00 2.13 5.09 6.25 2.94 19 ER1e ExonRegion 0 11.64 6.10 2.45 0.00 8.03 11.00 16.55 5.19 2.47 6.88 9.66 0.00 0.00 42.23 37.72 20.80 9.90 3.70 0.00 2.13 6.61 6.25 2.94 20 ER1f ExonRegion 0 20.17 8.37 4.47 0.08 8.03 15.10 22.97 5.19 2.54 7.56 14.55 0.00 0.00 55.22 49.66 31.99 10.29 6.96 4.12 3.50 8.56 7.60 4.66 21 ER1g ExonRegion 0 11.06 5.09 10.36 4.41 5.80 14.06 10.99 8.24 6.96 15.15 16.26 2.51 2.33 25.23 38.69 19.00 16.57 13.60 14.08 7.63 9.65 6.32 2.43 22 E1_Da KnownBoundary 0 0.00 0.00 3.37 0.00 0.00 0.00 1.72 2.55 1.77 1.07 0.00 0.00 0.00 2.18 4.45 4.10 4.68 1.78 3.86 3.26 0.00 0.00 0.00 23 E1a_E1h KnownJunction 0 3.04 0.00 5.82 3.86 0.00 0.00 0.00 6.20 12.18 2.74 26.64 0.00 12.99 36.49 52.91 8.72 22.81 21.35 0.00 11.57 7.60 2.82 11.44 24 E1a_E1i KnownJunction 0 0.00 0.00 12.18 3.06 4.07 0.00 0.00 11.09 6.02 23.26 14.32 6.30 0.00 19.37 24.72 8.63 9.35 3.90 32.75 0.00 7.85 0.00 7.09 25 ER1h ExonRegion 0 4.45 6.39 5.20 2.51 1.80 1.99 1.56 6.19 8.81 8.87 3.41 0.00 1.08 8.73 5.24 4.24 5.15 6.73 7.20 10.05 2.59 0.78 1.87 26 E1_Ah KnownBoundary 0 2.89 2.63 14.04 6.09 4.07 5.05 0.00 6.04 16.93 7.31 5.32 0.00 0.00 18.95 4.45 8.54 13.09 18.70 4.80 17.13 2.78 0.00 4.18 27 ER1i ExonRegion 0 13.25 10.64 21.76 9.09 13.25 20.07 14.14 37.61 30.26 31.04 76.77 11.21 12.41 66.58 77.13 40.59 39.29 38.48 25.29 26.73 29.34 11.43 10.73 28 E1_Db KnownBoundary 0 6.22 8.35 4.26 0.00 0.00 10.45 4.02 5.83 4.63 6.04 2.68 0.00 0.00 9.89 5.19 0.00 4.39 4.89 7.81 5.62 0.00 2.69 0.00 29 E1b_E1i KnownJunction 0 10.67 12.50 23.03 6.49 21.48 12.27 12.45 26.94 19.36 34.89 79.81 23.11 13.31 64.69 53.03 47.85 48.99 15.25 27.29 24.22 21.37 2.63 6.74 30 ER1j ExonRegion 0 7.14 8.62 6.70 4.24 5.37 10.73 5.80 16.74 8.21 10.65 10.12 3.67 1.41 8.66 5.56 5.87 3.90 8.73 5.09 6.47 1.79 2.37 2.59 31 E1_Ai KnownBoundary 0 18.00 6.64 1.83 8.92 0.00 20.56 8.13 12.36 6.08 6.34 4.21 0.00 0.00 15.19 4.45 8.12 4.02 6.92 3.48 0.00 2.97 5.39 3.93 32 ER1k ExonRegion 0 32.82 22.40 50.55 23.77 26.25 33.71 29.24 70.14 39.23 74.84 95.57 25.95 29.11 115.68 106.83 77.17 70.56 63.06 58.25 45.77 43.56 14.98 21.28 33 E1_Dc KnownBoundary 0 17.48 38.02 25.16 4.59 16.04 18.63 28.13 32.94 18.34 19.80 4.58 0.00 0.00 21.60 0.00 7.60 8.13 15.09 15.72 32.02 3.09 2.69 0.00 34 E1c_E1k KnownJunction 0 30.89 6.05 27.97 14.62 23.51 13.69 27.16 38.94 22.48 44.43 98.24 30.01 20.29 52.56 70.46 54.69 54.42 44.77 19.86 30.42 47.57 5.76 23.05 35 E1c_E1l KnownJunction 0 2.96 3.35 11.00 14.55 4.07 10.51 5.52 7.27 3.94 19.85 9.05 5.25 6.17 15.95 17.80 12.82 9.54 9.29 7.81 4.92 0.00 0.00 3.33 36 ER1l ExonRegion 0 19.46 27.93 31.33 15.98 15.61 30.50 18.59 41.12 20.07 37.09 16.30 1.68 4.86 19.47 11.16 19.08 11.08 34.79 14.99 17.75 4.22 3.59 5.58 37 E1_Aj KnownBoundary 0 42.45 35.52 54.40 25.94 36.33 57.52 11.97 55.00 16.35 59.23 16.90 5.25 0.00 14.42 35.97 15.38 3.55 35.69 30.97 38.54 5.44 5.39 0.00 38 ER1m ExonRegion 0 18.15 19.95 32.13 24.81 13.72 28.17 12.94 45.80 17.75 41.98 11.49 3.22 1.23 18.47 21.61 7.81 11.65 33.89 13.35 22.72 4.94 2.62 5.73 39 E1_Ak KnownBoundary 0 12.67 18.29 32.76 21.64 4.33 36.91 17.49 44.85 17.91 28.12 8.58 6.30 0.00 7.12 16.32 15.98 4.77 31.63 7.72 31.64 6.18 0.00 0.00 40 ER1n ExonRegion 0 41.75 25.43 48.82 24.70 32.59 40.49 25.91 72.89 45.29 66.03 85.95 12.85 20.24 113.37 115.66 53.45 52.89 57.92 25.58 44.33 39.51 16.23 16.88 41 E1_Dd KnownBoundary 0 9.71 9.67 24.13 11.12 16.21 32.14 3.93 35.32 13.48 22.38 16.74 0.00 6.82 21.96 18.54 17.09 9.16 42.08 15.44 8.63 3.15 8.63 4.01 42 E1d_E1l KnownJunction 0 54.31 11.71 23.06 37.32 31.24 16.07 2.25 71.88 31.71 35.03 102.50 6.30 13.31 133.73 126.09 60.33 79.66 39.13 38.31 61.68 33.67 13.96 38.50 43 ER1o ExonRegion 0 22.06 16.07 32.92 12.01 8.91 25.21 10.11 37.64 13.09 35.97 7.68 3.92 1.38 17.33 12.39 15.80 9.24 28.80 17.51 15.01 2.56 3.68 3.79 44 E1_Al KnownBoundary 0 44.08 9.54 28.83 16.15 29.46 50.03 13.91 37.34 13.51 28.58 2.00 0.00 0.00 27.43 4.45 11.79 22.25 23.55 21.27 23.84 2.97 0.00 3.84 45 ER1p ExonRegion 0 98.37 27.71 66.32 45.15 35.32 48.18 28.22 97.65 60.49 83.33 106.75 18.83 31.24 127.80 161.80 73.35 69.95 53.77 45.47 59.63 48.85 21.89 17.13 46 E1_De KnownBoundary 0 108.98 27.10 76.22 26.50 38.71 34.53 33.25 98.04 54.02 75.67 102.13 13.05 34.09 118.08 147.35 59.13 43.29 61.81 17.98 63.47 48.06 25.78 15.71 47 ER1q ExonRegion 0 52.02 33.25 90.17 42.59 39.51 54.64 29.69 99.59 49.34 90.48 129.98 17.91 31.32 141.34 170.37 111.88 85.62 83.24 57.16 62.91 53.10 24.12 18.92 48 E1_Df KnownBoundary 0 27.56 18.09 92.87 50.44 20.46 25.10 15.90 161.63 62.33 104.60 97.34 19.66 70.94 133.15 159.84 110.91 68.91 95.92 60.14 65.32 32.19 36.25 19.89 49 ER1r ExonRegion 0 38.32 23.69 69.94 38.52 13.34 40.32 24.32 124.30 62.37 105.55 149.71 27.12 52.83 172.97 249.81 125.48 91.31 91.90 94.25 58.51 51.98 30.36 27.21 50 E1_Dg KnownBoundary 0 92.02 35.32 83.38 38.26 33.36 56.56 49.99 158.14 67.74 118.84 203.84 25.36 61.20 168.93 146.24 149.19 122.95 115.78 99.39 52.54 92.30 23.39 43.79 51 ER1s ExonRegion 0 58.30 14.39 60.25 37.99 33.66 42.75 26.79 110.30 58.90 71.72 152.61 24.35 32.90 121.86 134.14 85.36 83.61 68.68 70.33 70.31 61.22 20.97 20.14 52 E1_Dh KnownBoundary 0 56.38 18.22 63.95 58.53 30.31 10.96 24.29 109.46 57.03 48.41 63.38 12.45 58.11 98.12 136.47 38.28 56.94 67.32 49.79 42.12 23.60 18.00 13.06 53 ER1t ExonRegion 0 55.53 16.44 27.35 18.52 21.68 24.72 14.51 60.95 32.45 32.05 66.28 11.41 45.49 67.38 98.57 43.67 36.40 40.02 31.60 24.48 24.23 13.01 11.50 54 ER1u ExonRegion 0 0.00 2.03 1.23 0.00 2.68 0.00 2.65 0.86 1.85 1.72 1.93 0.00 7.04 8.93 4.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55 ER1v ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.24 0.00 0.00 0.00 0.00 3.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00