Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SLC2A6 Gene 0 21.00 5.83 21.08 6.20 15.50 32.13 12.55 40.55 30.98 26.91 80.51 11.99 19.73 112.15 216.82 113.40 115.68 83.38 35.12 36.00 33.20 17.39 31.62 2 448071 Transcript 0 0.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.86 0.00 0.00 0.00 1.29 2.64 0.00 0.82 0.00 1.89 2.08 0.93 0.00 3 371899 Transcript 1 22.74 3.29 24.90 1.90 15.70 16.87 7.82 43.78 35.62 15.61 123.82 6.30 39.45 119.84 260.21 83.23 170.45 81.25 36.05 27.10 46.02 20.64 43.36 4 432868 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.85 0.00 0.00 2.47 0.00 0.00 4.94 0.00 0.00 0.00 1.58 0.00 0.00 0.00 0.00 0.00 5 487870 Transcript 0 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.94 4.45 3.59 4.68 3.94 0.00 0.00 0.00 0.00 0.00 6 371897 Transcript 0 7.11 0.00 16.08 5.96 3.48 37.08 6.32 34.46 15.05 15.39 5.32 12.15 0.00 33.20 20.77 39.73 26.74 39.05 4.24 15.53 22.43 2.51 4.35 7 485978 Transcript 0 2.77 0.50 6.03 2.28 2.00 6.67 3.65 7.48 6.57 6.61 6.64 0.74 4.03 17.06 40.21 25.28 20.91 17.62 7.67 8.77 5.72 3.46 8.33 8 414172 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ER1a ExonRegion 0 0.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.86 0.00 0.00 0.00 1.29 2.64 0.00 0.82 0.00 1.89 2.08 0.93 0.00 10 ER1b ExonRegion 0 2.12 0.00 0.00 0.00 1.07 1.83 0.00 0.00 0.00 0.46 1.93 0.00 0.00 0.81 2.90 4.76 1.65 2.96 0.64 2.13 3.53 2.92 0.00 11 E1_Ad KnownBoundary 0 3.56 0.00 0.00 0.00 4.33 8.69 0.00 0.00 0.00 0.00 2.21 0.00 0.00 6.59 0.00 8.72 9.54 9.53 4.61 0.00 9.20 8.70 4.35 12 E1_Ae KnownBoundary 0 11.04 3.16 0.00 0.00 4.07 16.18 4.50 2.46 0.00 3.33 5.11 0.00 0.00 8.48 4.45 49.22 23.00 7.21 31.81 0.00 9.20 0.00 33.21 13 ER1c ExonRegion 0 5.98 1.59 0.75 0.65 4.42 11.80 2.19 1.65 0.54 2.44 7.98 0.00 0.00 10.24 19.80 35.54 26.12 11.33 13.16 2.13 15.23 8.33 18.26 14 E1_Af KnownBoundary 0 21.26 0.00 4.70 3.73 19.61 64.28 14.93 7.27 7.47 6.02 59.01 0.00 0.00 68.16 189.63 144.24 69.10 76.48 41.04 14.38 17.30 11.63 45.07 15 ER1d ExonRegion 0 9.26 4.07 1.23 1.36 8.03 29.34 2.65 2.38 1.70 3.44 18.60 0.00 0.00 26.59 41.71 63.53 36.31 20.56 25.48 0.53 21.49 9.12 37.44 16 ER1e ExonRegion 1 16.43 5.23 1.75 2.66 14.65 44.45 9.20 5.35 5.53 6.39 41.05 0.00 0.00 51.82 120.33 120.72 70.42 44.08 43.68 7.19 23.93 12.70 49.50 17 ER1f ExonRegion 1 6.13 6.08 6.36 1.17 10.55 25.83 10.43 13.65 9.23 16.98 49.98 4.37 1.40 54.60 105.10 85.64 91.68 56.90 51.06 16.80 24.94 6.56 21.35 18 E1_Da KnownBoundary 0 0.00 0.00 1.69 0.00 0.00 0.00 0.00 0.00 1.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.68 0.00 4.24 0.00 0.00 0.00 0.00 19 E1a_E1g KnownJunction 1 3.78 0.00 7.57 0.00 3.40 2.16 2.25 15.94 8.74 9.75 34.01 6.30 6.49 26.43 31.89 3.93 74.24 26.41 7.53 9.01 38.05 0.00 0.00 20 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER1g ExonRegion 0 0.20 0.00 2.97 1.79 1.54 4.01 3.22 3.64 3.98 4.82 3.53 0.99 1.44 9.15 26.15 13.96 15.31 11.49 6.35 4.40 4.29 2.69 3.74 22 E1_Ag KnownBoundary 0 3.48 0.00 3.25 2.06 3.40 5.34 4.20 4.93 8.13 4.57 2.16 0.00 0.00 12.01 52.41 33.67 9.54 17.33 8.38 10.55 5.75 0.00 3.67 23 ER1h ExonRegion 1 1.88 1.42 22.81 3.58 9.98 21.37 6.52 43.88 32.30 34.60 107.22 12.56 8.11 121.32 219.33 144.50 164.21 110.60 66.40 35.29 54.21 20.58 40.08 24 E1b_E2a KnownJunction 1 6.52 2.76 22.68 5.19 8.66 27.48 3.75 59.19 42.56 32.23 101.34 30.16 0.00 181.65 202.49 143.21 118.28 113.87 32.57 40.72 50.72 18.74 42.00 25 ER2a ExonRegion 0 9.30 4.78 24.93 6.18 15.99 39.56 12.21 43.14 29.28 31.06 113.98 11.61 20.46 138.92 217.19 107.97 136.36 83.85 31.47 40.23 51.98 18.17 23.56 26 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.30 0.00 2.37 0.00 13.64 0.00 4.45 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 27 E2a_E3b KnownJunction 0 19.86 5.13 29.63 8.99 14.60 30.83 10.55 56.60 49.31 35.91 134.88 18.16 13.64 214.32 253.17 161.84 158.02 150.31 62.87 44.49 57.39 24.80 47.29 28 I2_SR1 SilentIntronRegion 0 2.73 1.12 1.78 0.95 1.58 3.38 2.75 10.13 4.11 6.17 7.40 0.00 2.13 14.20 27.03 25.02 20.68 8.14 7.52 5.09 1.69 0.38 4.23 29 I2_AR1 ActiveIntronRegion 0 4.23 1.11 1.23 0.00 0.00 0.00 0.36 0.00 4.94 1.15 1.93 0.00 4.69 11.07 14.24 13.24 9.30 18.98 3.76 6.19 2.20 0.00 10.68 30 ER3a ExonRegion 0 1.58 1.75 0.45 0.12 0.75 4.99 2.56 1.90 1.56 2.93 7.68 2.79 7.48 8.45 22.22 10.65 15.67 6.74 0.81 1.91 8.17 0.82 3.12 31 E3_Ab KnownBoundary 0 3.70 2.76 2.87 0.00 3.90 5.51 6.54 2.05 0.00 5.51 4.69 0.00 13.15 2.47 22.99 7.43 4.77 11.23 0.00 0.00 9.14 3.00 3.59 32 ER3b ExonRegion 0 7.35 5.14 25.93 9.77 8.24 27.25 13.45 54.25 37.40 41.90 96.57 4.90 14.83 171.43 235.35 126.84 169.21 115.55 48.13 30.22 37.66 18.56 24.56 33 E3_Da NovelBoundary 0 0.00 0.00 1.71 0.00 0.00 0.00 0.00 6.53 4.22 2.74 2.58 0.00 0.00 6.77 6.30 11.54 17.02 7.46 13.46 0.00 5.62 0.00 3.33 34 E3a_E4a KnownJunction 0 0.00 0.00 27.50 3.26 4.33 28.85 5.17 37.30 28.41 31.78 63.33 6.75 12.50 80.52 140.18 103.05 153.53 90.29 27.29 18.22 31.14 15.00 23.39 35 E3a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.94 4.45 3.59 4.68 3.94 0.00 0.00 0.00 0.00 0.00 36 E3a_E4c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.85 0.00 0.00 2.47 0.00 0.00 4.94 0.00 0.00 0.00 1.58 0.00 0.00 0.00 0.00 0.00 37 E3b_E4a NovelJunction 0 0.00 0.00 6.06 1.96 3.90 0.00 1.94 5.79 0.00 1.02 0.00 0.00 0.00 9.71 21.39 7.52 12.90 1.87 7.34 3.26 3.15 2.63 0.00 38 E3b_E4c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.83 15.70 0.00 0.00 2.57 0.00 0.00 0.00 0.00 0.00 39 ER3c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.46 0.66 1.73 0.00 4.87 0.00 0.00 0.00 8.12 13.78 5.20 7.43 1.85 3.19 0.00 0.00 0.00 2.94 40 ER4a ExonRegion 0 14.27 0.00 23.17 2.54 7.88 29.12 6.67 32.26 31.56 31.03 108.32 4.10 14.07 117.57 202.50 104.99 135.83 113.96 50.36 27.34 50.83 19.15 18.18 41 E4_Ab KnownBoundary 0 33.86 0.00 20.49 3.76 14.94 55.03 14.57 36.10 39.24 38.28 145.88 25.21 26.95 164.52 261.57 187.22 148.48 156.61 94.69 53.88 67.46 21.62 40.97 42 ER4b ExonRegion 0 8.92 0.00 20.13 4.15 8.09 54.62 9.43 29.26 40.79 33.34 116.11 28.86 43.89 165.08 234.03 136.79 181.08 157.89 53.70 45.29 56.56 20.98 43.35 43 E4_Ac KnownBoundary 0 10.30 0.00 21.17 4.99 8.40 66.95 7.99 28.71 43.66 25.33 121.72 36.76 27.27 175.35 239.94 154.92 175.22 161.46 28.71 39.76 46.21 14.14 43.96 44 ER4c ExonRegion 0 7.57 0.00 24.56 5.21 11.03 35.90 4.83 53.04 40.20 44.64 117.41 15.44 24.39 176.38 308.95 164.46 162.99 120.31 33.98 43.36 49.98 21.18 27.21 45 E4_Da NovelBoundary 0 0.00 0.00 10.94 3.70 9.25 15.50 3.89 22.80 23.81 23.37 34.80 0.00 11.69 30.26 27.32 21.87 42.64 36.69 24.38 30.68 22.86 5.20 3.16 46 E4a_E5a NovelJunction 0 3.70 0.00 2.60 0.00 0.00 0.00 0.00 9.36 6.34 3.22 5.05 0.00 0.00 2.83 0.00 0.00 9.35 16.83 0.00 2.94 3.09 0.00 0.00 47 E4b_E5a KnownJunction 0 10.59 6.25 23.54 9.39 20.03 47.08 11.88 47.11 53.38 54.40 115.13 6.30 12.66 140.74 321.65 113.13 185.69 143.10 43.20 50.30 50.35 24.13 27.83 48 ER4d ExonRegion 0 4.23 0.00 20.01 5.45 20.96 40.04 10.37 45.80 42.41 48.74 113.07 8.66 15.63 139.94 277.55 125.32 166.70 130.88 32.92 57.09 58.03 22.22 35.73 49 ER5a ExonRegion 0 10.83 3.97 24.66 7.70 16.30 45.04 11.58 66.81 53.13 44.05 118.63 14.15 23.14 171.80 301.10 188.10 182.71 177.95 36.33 52.68 48.05 17.77 29.62 50 E5a_E6a KnownJunction 0 13.48 9.01 21.91 11.02 36.42 31.00 6.76 83.46 47.42 40.32 57.38 20.26 45.94 169.52 270.10 222.76 181.02 156.20 24.57 60.72 54.67 8.51 41.91 51 E6_Aa NovelBoundary 0 12.97 0.00 3.31 0.00 4.16 0.00 0.00 2.26 0.00 1.45 0.00 0.00 13.31 0.00 6.30 11.11 17.48 8.08 0.00 0.00 7.04 2.94 0.00 52 ER6a ExonRegion 0 9.96 2.57 28.76 8.75 12.42 39.27 11.99 51.90 44.32 39.86 100.23 8.10 21.00 173.08 311.90 146.97 162.59 128.61 46.03 52.18 45.33 20.74 35.02 53 E6_Da KnownBoundary 0 7.19 0.00 1.45 1.53 3.65 5.68 2.25 9.16 10.97 6.58 20.37 0.00 0.00 16.72 48.09 55.20 12.90 21.10 9.51 14.32 3.15 5.57 12.29 54 E6a_E6b KnownJunction 0 22.74 3.29 24.90 1.90 15.70 16.87 7.82 43.78 35.62 15.61 123.82 6.30 39.45 119.84 260.21 83.23 170.45 81.25 36.05 27.10 46.02 20.64 43.36 55 E6a_E7a KnownJunction 0 7.11 0.00 16.08 5.96 3.48 37.08 6.32 34.46 15.05 15.39 5.32 12.15 0.00 33.20 20.77 39.73 26.74 39.05 4.24 15.53 22.43 2.51 4.35 56 ER6b ExonRegion 0 5.34 1.00 9.10 2.77 2.46 9.33 4.09 11.33 9.16 8.41 9.75 0.50 6.62 24.98 54.26 36.60 26.51 23.75 8.99 13.14 7.15 4.23 12.91 57 E6_Ab KnownBoundary 0 13.41 3.16 20.11 4.53 7.56 21.46 6.01 21.36 16.41 20.31 20.53 0.00 18.99 38.32 48.58 50.59 42.36 45.27 20.89 12.98 3.09 3.12 12.72 58 ER6c ExonRegion 0 18.69 2.68 28.85 5.18 9.13 21.88 10.02 44.44 36.97 24.64 103.54 8.14 36.33 141.04 247.47 146.00 134.55 109.32 39.34 36.30 39.50 19.36 33.54 59 E6_Db NovelBoundary 0 3.04 0.00 2.87 1.70 0.00 8.18 0.00 18.28 2.89 2.63 0.00 0.00 6.66 4.59 25.71 15.64 17.58 6.51 4.80 5.75 3.15 5.33 12.21 60 E6b_E7a KnownJunction 0 20.60 0.00 16.65 2.03 16.47 17.89 10.33 37.30 30.73 24.93 109.24 6.30 27.76 155.22 238.33 148.42 108.09 84.94 29.27 13.87 35.21 14.14 31.33 61 ER7a ExonRegion 0 26.41 5.86 34.35 9.15 24.39 55.73 14.68 52.17 33.53 36.29 109.71 8.48 21.97 167.22 292.05 166.66 170.54 113.83 38.03 49.56 43.61 21.78 30.21 62 E7_Da NovelBoundary 0 3.19 3.35 21.47 2.03 4.33 15.50 10.86 4.07 3.07 9.48 12.69 6.15 0.00 18.54 35.85 19.31 30.57 31.67 4.33 23.01 0.00 8.51 0.00 63 E7a_E8a KnownJunction 0 27.71 9.34 26.85 10.02 19.69 80.86 20.98 40.33 35.65 33.85 132.82 0.00 19.80 166.81 237.96 133.90 168.21 94.68 59.48 57.40 58.13 21.98 44.90 64 I7 Intron 0 3.83 0.92 7.64 1.15 3.03 3.84 3.29 7.57 5.20 8.02 12.90 0.65 1.75 23.62 50.39 23.53 27.25 25.86 8.10 10.23 3.98 5.42 6.64 65 I7_AR1 ActiveIntronRegion 0 3.84 0.92 7.66 1.15 3.03 3.84 3.30 7.59 5.21 8.04 12.92 0.65 1.75 23.67 50.50 23.58 27.31 25.91 8.12 10.25 3.99 5.43 6.65 66 E8_Aa NovelBoundary 0 3.78 0.00 6.74 0.00 0.00 2.61 9.94 14.25 5.90 8.35 2.26 6.00 0.00 28.96 83.32 44.35 25.06 33.37 8.56 11.51 8.22 5.94 17.41 67 ER8a ExonRegion 0 51.80 14.26 32.83 10.80 32.15 53.87 24.35 68.71 51.44 39.22 124.41 25.47 35.28 169.03 363.38 170.27 165.52 112.49 52.10 60.56 44.71 29.94 57.85 68 IG16 Intergenic 0 1.58 1.01 2.73 1.52 1.33 3.65 2.64 8.33 5.04 2.55 0.96 0.00 0.00 1.24 14.82 2.96 2.46 4.34 3.17 7.41 0.00 1.04 2.92 69 IG16_SR1 SilentIntergenicRegion 0 1.60 1.02 2.75 1.53 1.34 3.69 2.66 8.41 5.09 2.58 0.97 0.00 0.00 1.25 14.96 2.99 2.49 4.39 3.20 7.48 0.00 1.05 2.95