Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C9orf7 Gene 0 10.31 26.19 60.96 32.08 15.77 30.48 19.18 79.99 43.27 87.55 12.00 2.46 2.47 16.05 33.96 14.65 23.42 80.27 49.13 45.25 32.31 17.88 17.70 2 291722 Transcript 0 3.48 0.00 5.34 1.23 0.00 0.00 0.06 11.30 2.16 8.19 0.00 0.00 0.00 0.00 4.59 3.50 4.21 11.32 2.12 0.30 2.97 1.56 5.85 3 474734 Transcript 0 0.00 0.00 0.73 0.78 0.73 0.75 0.19 1.41 1.48 1.16 2.82 0.00 0.00 1.10 2.27 0.00 0.45 2.15 3.49 0.88 1.80 0.26 2.04 4 316948 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 489519 Transcript 0 2.39 6.54 12.57 4.08 5.31 11.74 5.89 25.66 20.33 8.14 1.57 0.90 1.66 4.73 9.02 2.61 8.33 16.90 9.54 14.47 3.04 2.23 2.59 6 444798 Transcript 0 0.00 0.00 0.00 0.08 0.03 0.00 0.00 0.00 0.59 0.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.97 2.17 0.00 0.09 0.02 0.00 7 ER1a ExonRegion 0 0.00 0.00 0.12 0.39 0.00 0.00 0.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.28 0.00 0.00 0.00 4.25 0.61 0.00 0.00 0.00 8 ER1b ExonRegion 0 0.58 4.99 2.01 3.72 0.00 0.00 5.90 0.00 0.00 3.23 1.41 0.00 0.00 1.48 7.39 2.16 0.00 1.51 27.51 2.71 0.00 0.00 8.01 9 ER1c ExonRegion 0 3.71 19.91 23.96 16.06 5.95 24.68 10.24 32.75 13.04 36.06 6.75 0.00 0.00 6.13 10.15 4.95 11.33 53.46 38.44 18.87 8.95 5.02 9.94 10 E1a_E3a KnownJunction 0 3.78 11.84 44.59 31.40 0.00 10.45 2.12 74.67 40.77 74.09 24.32 0.00 0.00 2.47 18.91 4.10 18.05 61.97 78.40 35.86 16.62 6.06 12.29 11 I1 Intron 0 0.57 1.04 2.30 2.31 2.00 2.20 1.19 3.09 4.69 5.48 0.98 1.33 0.88 2.51 3.03 0.71 1.58 5.67 3.63 2.93 11.29 3.18 7.83 12 I1_SR2 SilentIntronRegion 0 0.77 1.37 3.07 3.42 2.56 2.67 1.75 4.29 6.09 7.41 1.38 1.85 1.33 3.39 4.19 1.08 1.95 7.33 4.14 4.36 14.59 4.21 10.36 13 E2_Aa NovelBoundary 0 3.78 9.34 1.83 3.30 0.00 0.00 4.24 6.98 6.25 13.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.17 0.00 2.36 22.67 3.12 19.04 14 ER2a ExonRegion 0 0.00 0.00 0.00 0.17 0.05 0.00 0.00 0.00 0.00 0.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.96 0.59 0.00 0.18 0.04 0.00 15 E2_Da NovelBoundary 0 0.00 0.00 1.83 0.00 0.00 0.00 2.25 7.02 1.79 8.81 0.00 0.00 0.00 2.71 6.18 0.00 0.00 9.78 0.00 3.20 16.12 5.27 7.77 16 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.98 3.76 0.00 0.00 0.00 0.00 17 I2 Intron 0 1.25 2.01 4.06 1.91 2.64 1.45 1.37 6.49 4.63 6.58 1.53 1.36 1.99 1.90 3.60 1.03 2.93 7.34 3.93 3.47 14.36 3.39 8.26 18 I2_SR1 SilentIntronRegion 0 1.45 2.21 3.94 1.83 3.06 1.32 1.37 6.11 5.54 6.93 1.12 1.65 1.65 1.82 3.24 1.32 2.28 9.09 4.63 4.06 15.14 3.27 8.47 19 I2_AR1 ActiveIntronRegion 0 0.56 1.31 4.51 2.17 1.19 1.91 1.39 7.86 1.49 5.41 2.95 0.36 3.19 2.18 4.86 0.00 5.25 1.31 1.53 1.42 11.76 3.87 7.60 20 E3_Aa NovelBoundary 0 12.82 6.71 1.36 5.53 3.48 0.00 3.97 20.29 5.70 12.63 5.21 6.30 6.82 2.12 8.90 0.00 17.86 19.81 21.93 2.49 6.24 11.21 8.62 21 ER3a ExonRegion 0 4.67 8.19 64.02 40.92 7.73 6.26 4.35 81.55 51.49 84.76 13.45 1.72 0.00 18.98 39.46 13.92 27.40 118.08 121.57 56.37 36.13 16.98 30.09 22 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 E3a_E5a KnownJunction 0 0.00 12.10 64.60 32.03 6.96 9.48 6.36 75.78 58.56 69.98 5.05 7.65 0.00 10.24 57.23 21.02 15.99 147.62 87.91 50.30 40.71 25.53 25.10 24 E3a_E6a KnownJunction 0 6.96 0.00 10.56 2.06 0.00 0.00 0.00 22.59 4.31 16.39 0.00 0.00 0.00 0.00 8.90 7.01 8.42 22.63 0.00 0.00 5.93 3.12 11.69 25 ER4a ExonRegion 0 0.00 0.00 2.20 0.60 2.20 2.26 0.57 4.24 2.72 3.49 3.24 0.00 0.00 3.30 2.36 0.00 1.36 6.44 10.48 2.63 5.40 0.77 1.78 26 E4a_E5a KnownJunction 0 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 1.71 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.35 27 ER5a ExonRegion 0 1.71 23.22 60.65 32.89 18.75 32.08 15.77 68.44 52.22 64.56 10.09 2.51 3.13 14.48 24.91 6.82 23.81 88.35 50.46 40.37 42.17 15.99 16.78 28 E5_Da KnownBoundary 0 0.00 8.09 13.45 6.39 3.57 20.39 4.06 20.04 13.89 13.22 2.68 0.00 0.00 2.30 8.90 0.00 8.32 4.31 3.67 17.90 0.00 3.12 0.00 29 E5a_E6a KnownJunction 0 0.00 37.49 64.81 46.11 24.02 70.93 34.27 71.18 68.49 89.02 12.37 0.00 0.00 5.06 34.12 12.05 4.30 79.80 44.42 41.03 74.87 14.33 12.21 30 ER5b ExonRegion 0 2.39 6.54 12.57 4.08 5.31 11.74 5.89 25.66 20.33 8.14 1.57 0.90 1.66 4.73 9.02 2.61 8.33 16.90 9.54 14.47 3.04 2.23 2.59 31 E5_Db NovelBoundary 0 6.89 3.35 16.23 1.43 15.45 21.52 10.20 40.58 19.04 5.78 7.26 0.00 13.31 12.60 8.90 0.00 0.00 12.06 3.67 26.85 5.87 0.00 0.00 32 I5 Intron 0 4.97 7.72 8.04 3.72 8.95 8.61 6.81 22.61 10.30 7.03 1.93 1.97 1.76 2.15 4.51 0.96 3.08 6.59 8.50 9.99 2.34 1.88 2.27 33 I5_AR1 ActiveIntronRegion 0 9.67 10.06 11.81 5.80 11.20 15.35 10.96 39.94 18.39 8.62 4.41 2.86 3.94 4.22 6.98 1.41 3.45 6.90 14.54 13.77 2.72 3.37 2.51 34 ER6a ExonRegion 0 12.27 43.97 84.53 46.72 26.09 44.21 22.38 117.41 54.59 111.92 15.53 0.68 1.82 20.48 47.44 14.15 20.51 94.85 59.02 46.61 42.71 21.78 18.16 35 E6a_E7a KnownJunction 0 10.67 46.44 90.18 43.72 36.84 49.97 29.37 120.10 53.30 113.73 18.58 6.30 0.00 23.72 46.97 16.15 43.29 100.40 76.05 58.36 57.51 34.29 43.88 36 ER7a ExonRegion 0 15.26 32.18 82.08 57.72 24.97 43.24 30.13 110.86 56.01 132.78 16.85 4.86 1.56 23.62 28.30 16.16 32.43 101.20 53.09 63.08 53.51 28.69 23.70 37 E7_Da KnownBoundary 1 16.97 34.53 113.09 72.85 34.47 21.69 26.67 145.03 71.41 171.81 7.84 0.00 6.82 17.48 40.05 11.11 52.45 149.61 73.32 62.38 40.03 38.33 33.72 38 ER7b ExonRegion 0 13.70 32.44 76.62 39.73 19.19 36.78 24.31 99.01 52.19 113.27 15.03 3.22 3.16 19.83 43.29 19.46 29.03 98.12 57.96 56.48 40.56 23.10 22.07 39 IG16 Intergenic 0 1.58 1.01 2.73 1.52 1.33 3.65 2.64 8.33 5.04 2.55 0.96 0.00 0.00 1.24 14.82 2.96 2.46 4.34 3.17 7.41 0.00 1.04 2.92 40 IG16_SR1 SilentIntergenicRegion 0 1.60 1.02 2.75 1.53 1.34 3.69 2.66 8.41 5.09 2.58 0.97 0.00 0.00 1.25 14.96 2.99 2.49 4.39 3.20 7.48 0.00 1.05 2.95