Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	C9orf142	Gene	0	98.78	50.14	107.79	54.18	32.63	67.73	34.82	71.98	67.51	56.94	72.32	8.10	9.09	99.70	117.70	72.41	90.40	120.33	97.22	71.28	46.70	34.44	38.35
2	371620	Transcript	1	53.76	31.01	15.87	5.25	6.69	42.45	19.26	8.64	7.04	8.60	13.43	0.00	0.00	12.02	42.94	60.93	36.47	29.66	43.80	22.55	5.95	4.38	39.20
3	468484	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	481187	Transcript	0	2.23	17.49	15.44	8.33	0.07	0.71	1.21	8.13	16.80	12.32	9.79	0.06	0.06	8.54	10.49	2.02	8.59	17.13	13.93	1.83	9.32	3.50	0.90
5	483807	Transcript	0	0.00	0.00	1.57	0.00	0.00	0.00	0.00	0.00	2.63	1.58	11.58	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	9.08	0.00	0.00	0.00
6	488678	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	493968	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	467845	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
9	492564	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.03	0.00	0.00	0.00	0.00	0.00
10	498095	Transcript	0	1.81	4.94	6.48	1.56	1.91	0.00	1.13	1.73	2.29	0.00	0.00	7.42	0.00	4.18	8.70	0.42	5.19	0.00	0.00	1.22	0.00	1.49	0.00
11	463765	Transcript	0	9.76	0.39	8.42	3.84	2.21	6.03	3.33	5.36	7.01	1.06	5.70	0.21	3.77	4.30	15.80	5.15	5.86	3.46	5.54	2.33	1.78	0.55	0.54
12	ER1a	ExonRegion	1	53.76	31.01	15.87	5.25	6.69	42.45	19.26	8.64	7.04	8.60	13.43	0.00	0.00	12.02	42.94	60.93	36.47	29.66	43.80	22.55	5.95	4.38	39.20
13	E1_Ae	KnownBoundary	0	725.31	270.87	100.56	55.84	93.21	488.92	250.14	63.62	65.74	43.22	152.83	0.00	0.00	144.98	283.33	478.08	232.91	285.74	710.51	194.63	69.68	70.23	212.72
14	ER1b	ExonRegion	1	104.13	57.75	32.10	9.81	16.05	87.66	42.63	13.48	14.33	13.76	32.09	0.00	0.00	27.29	102.70	137.91	63.38	48.78	106.39	42.55	11.02	16.25	73.42
15	ER1c	ExonRegion	1	221.81	98.83	61.27	23.17	35.32	195.12	82.62	28.35	28.65	26.38	66.88	0.00	0.00	44.50	157.25	244.31	94.41	81.67	265.66	77.45	28.65	25.42	110.42
16	ER1d	ExonRegion	1	328.85	146.93	91.44	32.71	46.16	279.43	126.93	39.54	42.38	48.03	107.28	0.00	0.00	93.79	235.36	291.08	152.46	122.18	392.20	118.35	45.45	41.67	143.34
17	E1_Af	KnownBoundary	0	61.71	24.93	120.60	45.18	12.31	20.67	5.96	49.21	54.02	65.33	14.58	0.00	0.00	16.66	18.54	20.51	31.04	129.29	32.57	24.03	3.09	10.47	12.46
18	ER1e	ExonRegion	0	305.61	130.95	99.69	32.76	44.72	250.58	113.34	43.09	48.83	52.55	103.96	0.00	0.00	80.97	140.19	244.88	137.11	125.78	374.85	107.52	42.81	40.78	117.57
19	ER1f	ExonRegion	0	60.19	18.50	58.49	20.67	5.69	23.99	15.76	21.25	31.26	33.57	29.73	2.20	5.48	24.25	26.07	17.87	29.94	50.05	34.41	24.36	12.94	8.39	14.85
20	E1_Da	KnownBoundary	0	6.82	5.33	1.21	8.19	0.00	0.00	0.00	1.73	6.92	8.38	4.74	0.00	0.00	4.59	4.45	0.00	8.51	9.20	3.95	0.00	5.87	0.00	0.00
21	E1a_E1g	KnownJunction	0	44.30	9.27	42.93	14.78	8.40	20.39	13.87	14.58	23.73	19.50	47.28	16.51	0.00	31.61	22.25	26.83	55.73	25.16	26.45	33.62	26.81	15.92	16.05
22	E1a_E1j	KnownJunction	0	0.00	0.00	1.57	0.00	0.00	0.00	0.00	0.00	2.63	1.58	11.58	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	9.08	0.00	0.00	0.00
23	ER1g	ExonRegion	0	2.23	17.49	15.44	8.33	0.07	0.71	1.21	8.13	16.80	12.32	9.79	0.06	0.06	8.54	10.49	2.02	8.59	17.13	13.93	1.83	9.32	3.50	0.90
24	E1_Ag	KnownBoundary	0	0.00	21.58	33.20	14.65	0.00	2.90	4.50	20.13	28.01	12.65	7.74	0.00	0.00	19.13	37.09	8.37	7.20	62.18	40.10	0.00	16.87	3.12	4.35
25	ER1h	ExonRegion	0	42.33	24.74	100.42	26.12	18.60	25.58	12.31	51.97	50.62	53.14	118.74	2.89	0.00	75.44	92.70	83.52	145.73	126.11	116.64	67.16	78.38	17.99	39.50
26	E1_Db	KnownBoundary	0	50.82	13.02	71.40	32.56	3.74	17.72	14.71	57.01	31.77	48.73	22.48	5.40	0.00	23.96	44.63	12.13	47.69	105.95	49.79	36.18	24.90	9.25	28.08
27	E1b_E1j	KnownJunction	1	28.45	0.00	111.65	24.37	4.33	7.33	4.06	51.84	29.20	38.01	85.65	5.70	0.00	51.62	98.89	341.71	101.92	151.84	376.10	61.81	37.13	32.88	144.26
28	E1b_E1k	NovelJunction	0	0.00	0.00	16.71	6.73	0.00	0.00	0.00	7.27	10.71	4.38	0.00	0.00	0.00	0.00	0.00	0.00	0.00	12.60	0.00	6.14	0.00	0.00	0.00
29	ER1i	ExonRegion	0	36.67	15.14	88.57	48.80	10.48	17.92	18.38	51.49	37.92	32.38	12.20	5.96	8.53	45.64	55.74	22.95	35.12	110.41	80.05	32.96	22.62	14.76	21.81
30	E1_Ah	KnownBoundary	0	52.82	30.92	126.84	93.93	36.59	36.97	41.73	69.83	56.57	51.01	21.16	0.00	6.82	40.44	83.32	43.92	31.14	209.17	109.56	59.63	50.35	11.33	33.04
31	ER1j	ExonRegion	0	48.28	24.13	104.07	51.38	24.08	90.24	46.12	53.51	61.22	52.04	30.83	3.79	4.84	48.76	55.97	27.18	32.63	121.03	63.48	52.57	39.62	19.10	12.45
32	E1_Ai	KnownBoundary	0	79.05	9.87	88.55	36.53	35.48	128.79	34.54	60.13	60.01	51.49	27.11	0.00	0.00	47.74	70.09	12.13	47.69	83.24	35.86	50.05	23.35	13.59	7.26
33	ER1k	ExonRegion	0	163.19	70.61	136.43	91.91	32.86	113.08	52.59	79.76	68.97	60.47	44.63	2.29	0.41	65.44	69.80	40.04	58.79	166.03	76.26	54.16	35.58	23.29	27.34
34	E1_Aj	KnownBoundary	0	360.29	115.57	224.09	151.66	47.79	68.88	55.29	116.20	78.85	69.38	60.80	5.85	0.00	87.53	82.45	62.38	50.68	255.10	160.95	72.61	77.47	34.78	46.01
35	ER1l	ExonRegion	1	301.06	100.39	224.49	126.14	40.63	76.94	37.15	123.99	98.05	83.49	122.05	8.84	18.47	192.91	245.13	367.39	149.69	273.88	376.78	135.26	70.74	79.22	154.02
36	E1_Dc	KnownBoundary	0	204.26	42.16	60.08	41.12	26.74	68.31	24.02	42.92	54.46	36.96	26.06	0.00	19.15	114.25	103.10	84.85	63.39	84.48	34.07	96.00	21.81	7.84	21.51
37	E1c_E1k	KnownJunction	0	28.75	30.72	83.88	53.87	3.90	23.62	20.71	36.23	35.94	25.33	66.23	0.00	18.83	69.22	162.80	73.40	44.88	97.17	40.38	52.92	28.97	31.17	16.30
38	ER1m	ExonRegion	0	137.04	29.83	63.33	44.77	43.25	64.81	27.48	52.29	48.39	41.40	38.12	5.32	6.83	70.84	81.16	47.63	60.67	128.38	39.64	86.61	25.22	24.32	37.69
39	E1_Ak	KnownBoundary	0	160.99	76.24	93.23	51.14	95.67	110.67	63.99	57.63	52.60	62.24	24.37	12.15	0.00	53.80	68.73	44.77	71.81	184.30	33.79	85.01	40.22	37.05	32.27
40	ER1n	ExonRegion	0	141.66	72.49	156.11	87.97	65.61	107.91	57.44	119.52	114.56	93.45	115.97	8.01	22.01	214.79	190.36	109.06	152.80	208.14	109.66	131.36	82.32	61.50	64.74
41	E1_Dd	KnownBoundary	0	130.69	82.35	179.92	96.76	40.49	120.04	77.15	125.52	125.66	97.75	107.82	12.00	6.82	237.74	239.08	81.77	177.37	172.90	86.21	95.36	83.65	35.64	58.90
42	ER1o	ExonRegion	0	117.15	106.23	148.99	62.71	39.63	125.05	70.67	88.15	96.40	78.01	118.64	8.32	25.01	194.79	258.35	63.36	147.86	117.23	90.05	114.39	73.28	54.37	41.53
43	E1e_E2a	KnownJunction	0	164.10	162.67	204.99	85.50	41.94	150.37	74.63	154.89	118.75	113.36	106.18	0.00	6.33	127.14	264.79	54.69	131.37	221.49	101.46	120.93	60.29	44.09	41.15
44	E1e_E2c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.03	0.00	0.00	0.00	0.00	0.00
45	ER2a	ExonRegion	0	106.31	101.99	165.74	77.27	56.88	127.61	78.96	130.21	108.15	110.07	152.80	11.88	7.94	210.84	225.85	83.60	163.18	190.56	105.85	108.84	78.03	66.35	52.33
46	E2_Ab	KnownBoundary	0	108.39	88.93	178.35	101.99	91.94	140.77	114.65	168.81	120.25	130.93	149.93	31.36	8.28	194.48	153.78	116.04	147.64	256.64	116.24	105.46	81.92	82.24	68.63
47	E2b_E2c	KnownJunction	0	157.14	80.84	227.14	124.69	97.28	81.54	52.82	221.43	161.89	141.08	213.11	51.62	46.59	234.56	228.82	180.38	227.02	292.45	175.16	173.66	96.25	98.71	93.90
48	E2_Dc	KnownBoundary	0	0.00	0.00	4.14	1.30	0.00	0.00	0.00	0.00	5.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.93	4.48	0.00	0.00	0.00	0.00	0.00
49	ER2b	ExonRegion	0	117.90	75.60	187.41	89.63	83.42	117.79	83.18	165.52	127.36	130.68	194.77	41.77	33.38	256.13	241.49	164.17	209.51	237.71	152.90	135.79	94.76	105.03	83.95
50	ER2c	ExonRegion	0	131.22	70.08	214.16	112.28	96.33	87.46	65.38	188.00	146.22	142.04	199.83	36.30	40.41	242.24	251.29	164.38	208.46	264.37	159.76	143.37	93.40	104.18	80.64
51	ER2d	ExonRegion	0	4.23	0.00	3.68	1.36	0.00	0.00	3.97	1.73	4.94	0.00	0.00	0.00	0.00	0.00	8.70	0.00	6.60	3.70	0.00	0.00	0.00	0.00	0.00
52	ER2e	ExonRegion	0	9.76	0.39	8.42	3.84	2.21	6.03	3.33	5.36	7.01	1.06	5.70	0.21	3.77	4.30	15.80	5.15	5.86	3.46	5.54	2.33	1.78	0.55	0.54
53	E2_Ac	KnownBoundary	0	10.74	0.00	7.98	3.00	0.00	0.00	6.62	2.51	2.60	1.42	2.37	0.00	0.00	8.12	5.44	4.36	0.00	1.87	8.66	0.00	2.41	0.00	0.00
54	ER2f	ExonRegion	0	140.29	64.42	251.32	125.77	81.74	77.41	39.48	195.99	163.56	138.26	153.67	25.36	19.99	231.44	264.22	121.72	190.55	209.72	142.96	159.62	99.88	55.88	58.56
55	E2d_E3a	KnownJunction	0	211.37	99.85	296.06	156.59	62.73	87.00	77.33	204.10	176.13	155.75	159.72	11.70	6.33	272.12	279.13	69.30	166.71	226.83	148.52	163.24	113.67	73.17	77.77
56	ER3a	ExonRegion	0	113.00	67.56	169.58	81.20	26.13	59.47	27.53	136.16	122.37	93.47	133.39	17.88	12.65	141.97	173.30	77.84	157.45	186.42	154.19	105.50	79.66	76.96	43.24
57	E3_Da	KnownBoundary	0	79.64	29.01	84.86	37.26	21.39	12.32	9.94	52.82	45.54	50.42	48.96	12.90	0.00	34.96	45.74	25.89	42.54	28.48	56.19	14.57	36.51	15.55	11.01
58	ER3b	ExonRegion	0	89.83	67.94	69.90	33.13	45.28	56.36	23.58	30.38	41.40	27.13	47.91	16.21	0.21	66.34	100.51	35.73	67.12	39.11	64.77	33.24	36.70	24.40	14.65
59	ER3c	ExonRegion	0	25.93	21.86	14.40	9.54	6.69	6.88	5.96	6.48	8.34	6.59	5.80	10.82	0.00	29.64	32.64	6.69	27.23	7.39	9.56	6.38	2.20	3.13	5.14
60	ER3d	ExonRegion	0	8.47	14.24	9.80	5.45	2.68	0.00	1.32	3.46	3.71	3.44	0.00	8.66	0.00	9.74	23.21	5.94	16.50	1.85	6.37	2.13	0.00	2.08	2.94
61	ER3e	ExonRegion	0	6.35	10.17	9.80	4.09	2.68	0.00	1.32	3.46	3.71	3.44	0.00	8.66	0.00	6.50	20.31	2.97	16.50	0.00	0.00	2.13	0.00	2.08	2.94
62	ER3f	ExonRegion	0	1.81	4.94	6.48	1.56	1.91	0.00	1.13	1.73	2.29	0.00	0.00	7.42	0.00	4.18	8.70	0.42	5.19	0.00	0.00	1.22	0.00	1.49	0.00