Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 REXO4 Gene 0 37.92 91.94 101.86 52.56 50.51 91.58 47.20 60.50 44.93 92.46 143.33 71.38 63.75 156.02 184.24 110.69 119.90 63.56 86.50 50.85 85.60 51.52 54.63 2 371942 Transcript 0 7.41 1.70 3.66 1.20 1.85 3.37 6.06 1.58 1.04 1.33 13.56 0.00 2.90 16.05 14.04 12.28 5.24 1.93 5.06 2.16 2.14 0.12 3.28 3 454825 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 478037 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 371935 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 494045 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 453165 Transcript 0 0.00 0.00 0.00 0.00 0.00 1.45 0.00 1.77 0.00 0.00 0.00 0.00 0.00 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 445916 Transcript 0 4.01 5.25 0.78 1.09 1.71 2.15 2.12 1.11 0.58 2.00 1.25 5.72 5.38 3.11 3.36 3.81 5.63 3.83 1.37 2.72 0.71 0.90 1.88 9 ER1a ExonRegion 0 7.41 1.70 3.66 1.20 1.85 3.37 6.06 1.58 1.04 1.33 13.56 0.00 2.90 16.05 14.04 12.28 5.24 1.93 5.06 2.16 2.14 0.12 3.28 10 E1_Ab KnownBoundary 0 7.04 6.25 4.88 1.60 7.89 7.61 10.47 2.18 0.00 1.48 21.69 0.00 0.00 21.60 22.25 28.71 4.39 4.48 8.94 0.00 2.72 0.00 8.37 11 E1_Ac KnownBoundary 0 11.04 6.58 0.00 0.00 4.33 8.29 10.91 0.00 1.79 0.00 7.63 0.00 0.00 2.88 0.00 12.48 4.77 0.00 0.00 3.13 9.20 0.00 12.72 12 E1_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1_Ae KnownBoundary 0 31.41 41.51 12.39 4.10 11.29 73.31 48.62 5.75 2.37 18.88 47.43 0.00 0.00 2.47 10.38 23.24 21.79 14.55 23.91 3.00 18.53 15.86 0.00 14 ER1b ExonRegion 1 25.63 20.34 14.30 2.65 13.53 42.79 34.13 5.57 4.87 9.24 41.56 0.00 0.00 81.93 60.28 47.39 17.60 5.44 16.81 7.33 17.87 8.80 14.68 15 ER1c ExonRegion 1 38.10 48.81 20.83 6.81 21.41 82.06 53.29 8.21 7.72 23.22 61.85 0.00 0.00 97.04 85.59 49.04 29.71 8.31 30.26 12.77 29.20 19.27 16.15 16 ER1d ExonRegion 1 38.10 58.97 22.06 8.18 21.41 97.19 54.28 6.91 8.65 26.38 61.85 0.00 0.00 99.07 89.94 50.53 33.01 9.24 35.04 12.77 33.06 22.92 26.43 17 ER1e ExonRegion 0 29.02 57.71 45.03 15.40 15.57 94.01 43.20 19.65 16.96 56.61 90.11 19.30 35.01 63.16 64.73 78.66 79.14 14.91 58.06 22.46 57.54 13.63 39.73 18 E1_Af KnownBoundary 1 7.04 15.06 66.26 13.19 6.71 10.05 6.05 35.61 21.67 101.57 206.05 17.26 38.80 58.16 82.82 64.43 175.78 14.59 17.79 33.49 138.57 12.00 25.61 19 ER1f ExonRegion 0 13.23 58.26 103.77 56.51 49.09 102.08 56.15 68.85 48.56 139.26 175.88 118.66 137.56 210.16 176.47 209.21 162.68 67.45 133.50 49.25 120.85 66.86 105.65 20 E1a_E3a KnownJunction 1 17.48 85.12 74.18 39.92 92.28 375.69 220.28 57.46 33.56 119.78 155.51 105.78 80.19 73.11 76.77 42.89 140.53 21.47 20.42 32.47 139.99 35.70 40.38 21 E1a_E3b KnownJunction 0 3.56 0.00 6.80 0.00 0.00 2.27 6.01 0.00 2.37 6.37 4.32 6.90 0.00 7.89 0.00 0.00 0.00 3.65 0.00 0.00 5.50 0.00 7.51 22 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 Ix_SR2 SilentIntronRegion 0 3.96 1.90 0.00 0.95 2.50 1.72 2.48 2.41 0.00 1.60 5.43 15.01 7.23 2.41 10.78 6.95 7.72 0.00 5.96 5.97 0.00 0.97 5.50 24 E2_Aa NovelBoundary 0 23.71 0.00 0.00 2.06 3.57 2.90 4.50 1.56 2.81 0.00 7.05 13.50 6.17 2.12 0.00 0.00 17.58 6.18 8.56 5.50 3.03 2.63 4.27 25 ER2a ExonRegion 0 4.25 4.51 1.56 2.18 3.43 4.30 4.24 2.21 1.17 2.44 2.50 11.45 10.75 6.21 6.73 7.61 11.27 7.66 2.73 5.45 1.41 1.80 3.76 26 E2a_E3a KnownJunction 0 3.78 5.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER3a ExonRegion 0 50.80 139.42 120.53 65.72 56.89 99.72 50.73 81.97 63.49 147.78 229.68 160.09 158.73 252.16 221.53 170.31 196.01 58.13 122.79 63.35 134.92 92.97 78.76 28 E3_Ab KnownBoundary 0 36.23 44.33 111.65 61.20 42.61 79.56 37.05 73.60 58.22 97.78 198.00 123.94 78.89 150.57 168.37 117.83 146.89 61.77 74.45 56.31 60.05 76.85 42.17 29 ER3b ExonRegion 0 53.68 109.33 133.73 66.69 68.42 108.35 68.64 81.66 67.56 107.38 224.63 149.96 98.04 240.28 257.07 165.64 187.74 86.40 120.55 63.70 118.19 75.66 67.44 30 E3a_E4a KnownJunction 0 36.23 81.70 90.18 51.81 30.14 75.98 42.22 61.73 58.30 81.69 162.25 139.40 90.42 214.20 198.90 139.96 137.63 49.08 52.71 80.41 117.69 60.31 53.95 31 E3a_E6a KnownJunction 0 0.00 5.99 11.53 0.00 3.14 0.00 2.25 10.80 1.59 0.00 2.26 7.65 0.00 7.24 6.06 0.00 8.88 4.10 0.00 0.00 2.35 0.00 0.00 32 ER4a ExonRegion 0 33.39 112.92 127.69 51.17 51.43 107.26 57.62 62.18 53.90 99.42 159.91 112.15 56.67 170.95 221.72 89.33 141.16 60.48 73.90 68.11 119.02 53.81 50.33 33 E4a_E5a KnownJunction 1 42.08 111.49 128.62 42.35 49.07 126.12 78.12 68.51 51.01 108.12 170.89 115.99 67.69 132.03 246.37 53.83 136.98 71.38 41.70 71.84 88.59 47.09 34.40 34 E4a_E6a NovelJunction 0 0.00 3.35 1.48 1.33 0.00 2.73 0.00 0.00 3.59 1.13 4.58 6.30 0.00 0.00 6.30 3.67 4.58 6.72 8.75 2.68 8.53 2.88 7.68 35 ER5a ExonRegion 0 30.35 130.57 132.23 65.82 43.64 121.65 63.49 78.38 55.30 110.99 161.89 65.87 79.98 212.40 258.48 144.88 156.46 72.66 92.16 79.28 99.35 60.39 83.45 36 E5_Da KnownBoundary 0 67.79 109.65 185.65 96.22 24.45 133.50 58.12 89.91 66.35 131.06 150.14 37.81 30.52 203.07 158.35 117.83 130.81 60.02 181.46 63.92 88.28 63.68 101.07 37 ER5b ExonRegion 0 64.79 129.80 162.38 67.21 52.72 121.55 52.17 84.13 47.90 120.80 161.28 49.79 56.94 186.19 237.59 108.85 157.10 79.60 113.88 75.20 107.43 54.92 64.10 38 E5b_E6a KnownJunction 0 82.16 134.52 180.12 79.08 104.16 147.24 40.76 87.08 45.37 123.24 169.99 56.57 119.47 154.81 196.18 145.26 182.89 91.61 93.65 64.36 87.54 67.30 60.69 39 ER6a ExonRegion 0 49.41 129.95 187.80 84.64 87.76 139.24 61.07 102.37 61.99 127.18 220.16 73.72 117.79 208.03 199.15 157.86 227.43 103.13 116.08 79.30 92.71 85.39 69.56 40 E6_Da NovelBoundary 0 58.90 89.33 218.09 115.94 72.92 115.16 63.59 120.14 74.57 119.91 177.52 76.22 60.06 189.54 158.23 145.86 144.09 101.52 150.59 65.32 59.55 83.71 79.64 41 E6b_E7a KnownJunction 0 118.17 237.59 282.54 143.11 128.01 253.04 134.74 122.11 103.21 154.67 302.18 94.83 145.77 246.34 262.81 308.72 220.76 123.99 276.71 80.98 117.56 127.55 153.14 42 E6b_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.90 0.00 3.53 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 ER6b ExonRegion 0 68.95 152.95 225.15 112.19 95.76 192.74 89.12 114.35 87.11 139.62 265.11 90.46 124.41 257.47 180.18 245.75 201.18 112.62 212.25 79.28 100.56 103.74 125.81 44 E7_Aa NovelBoundary 0 0.00 2.96 0.00 0.00 26.99 6.93 3.89 2.51 0.00 3.22 4.79 0.00 13.64 4.71 4.45 3.85 0.00 9.62 0.00 2.75 11.98 0.00 7.94 45 ER7a ExonRegion 0 67.90 192.27 182.83 93.58 97.25 204.24 104.06 96.17 84.78 143.97 229.37 190.21 134.39 291.13 331.75 207.45 208.44 97.54 176.94 65.36 101.34 99.01 107.83 46 E7a_E8a KnownJunction 0 33.41 204.37 171.40 91.00 133.62 208.97 89.25 102.97 78.85 146.08 190.36 102.48 75.48 181.47 225.11 194.74 204.11 75.53 118.87 63.15 67.34 87.01 76.40 47 ER8a ExonRegion 0 44.31 176.12 132.02 81.57 83.04 154.58 62.60 83.53 68.76 110.67 193.38 121.86 80.27 167.68 199.33 162.74 156.44 99.14 122.98 63.31 75.58 77.98 63.79 48 E8_Da NovelBoundary 0 27.86 102.02 64.66 45.65 34.55 104.88 34.67 38.45 37.50 57.62 125.93 100.23 38.15 67.75 62.06 69.30 103.23 72.96 44.33 26.46 42.07 37.41 17.16 49 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50 E8b_E9a KnownJunction 0 74.90 157.93 131.19 79.88 131.75 138.27 49.73 57.46 53.82 107.37 207.58 97.53 61.03 201.19 233.88 121.51 131.93 102.72 124.43 83.92 104.28 55.60 35.51 51 ER8b ExonRegion 0 49.28 138.86 119.91 71.06 87.34 139.89 42.46 59.01 53.55 98.80 202.40 123.70 72.36 175.64 194.38 111.24 135.81 113.64 99.43 66.26 86.26 55.36 33.77 52 ER9a ExonRegion 0 63.65 113.67 124.11 65.70 91.41 134.85 59.06 71.36 57.33 115.49 193.95 111.86 67.90 223.23 247.60 117.16 149.77 104.25 124.61 64.94 114.23 65.02 54.57 53 E9_Da KnownBoundary 0 75.27 118.27 134.97 60.33 49.41 83.13 69.60 80.67 62.96 141.37 166.88 164.30 67.69 186.36 228.44 94.68 181.58 89.71 110.21 48.64 125.90 60.44 58.99 54 ER9b ExonRegion 0 43.51 91.47 105.10 58.15 56.24 83.31 43.51 64.67 45.76 91.77 133.72 41.39 36.76 143.28 207.89 92.04 98.20 73.51 80.31 53.24 85.52 48.18 47.18 55 ER9c ExonRegion 0 0.00 6.10 0.61 2.73 0.00 3.67 1.99 0.00 0.00 0.00 2.90 0.00 0.00 4.06 2.90 2.97 0.00 0.92 1.59 0.00 4.41 2.08 0.00