Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SURF1 Gene 0 63.32 46.35 79.75 58.64 46.81 38.61 29.72 58.93 53.52 99.44 62.14 27.80 23.59 100.01 171.05 81.86 68.64 69.05 70.02 55.52 70.95 51.89 50.26 2 463965 Transcript 0 2.36 1.58 2.23 0.90 0.75 1.97 0.97 2.01 1.14 3.09 2.02 0.00 0.00 1.85 4.31 3.33 3.34 1.27 1.98 3.87 2.66 0.89 0.46 3 371974 Transcript 0 57.29 36.20 27.17 36.83 19.47 27.75 14.85 19.57 26.42 35.89 24.87 29.98 25.80 28.75 83.29 28.98 22.39 20.91 22.40 24.36 19.10 16.77 20.53 4 437995 Transcript 0 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 3.00 3.15 0.00 0.00 5 495952 Transcript 0 75.45 51.29 13.55 13.74 29.79 7.60 14.40 14.45 13.32 21.18 16.12 18.19 6.29 21.98 25.93 28.35 16.58 11.65 14.03 11.32 14.84 8.63 11.72 6 ER1a ExonRegion 0 1.12 0.00 0.49 0.54 0.00 2.44 0.70 0.00 0.00 1.27 0.51 0.00 0.00 0.32 0.54 0.00 0.00 0.00 0.00 1.13 0.00 0.55 0.00 7 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.58 0.00 0.00 0.00 0.00 0.00 8 ER1b ExonRegion 0 2.99 5.86 16.79 5.29 2.96 11.33 4.50 0.08 3.50 14.94 9.01 0.00 2.37 7.62 28.60 4.34 1.94 0.04 5.96 11.09 9.10 4.98 2.94 9 E1a_E2a KnownJunction 1 12.37 12.50 39.29 17.18 3.31 16.24 7.95 1.97 12.99 37.90 11.37 0.00 0.00 0.00 23.24 8.20 8.13 6.38 8.85 2.81 16.68 8.51 3.41 10 E1a_E3a NovelJunction 0 3.33 3.35 3.28 11.55 0.00 19.87 0.00 4.48 1.30 9.16 0.00 0.00 0.00 0.00 4.45 0.00 0.00 11.19 12.42 2.62 2.72 0.00 4.35 11 E2_Aa NovelBoundary 0 68.53 3.03 7.57 0.00 12.39 12.72 4.42 2.42 3.07 10.07 4.26 0.00 0.00 7.12 13.60 15.89 3.65 4.68 3.76 9.14 5.31 0.00 6.66 12 ER2a ExonRegion 0 18.89 6.69 21.73 6.40 3.04 10.93 3.23 6.18 7.74 17.53 14.27 11.66 11.45 21.46 28.73 14.17 12.19 2.95 7.23 8.51 13.65 4.21 3.22 13 E2_Da KnownBoundary 0 3.41 0.00 0.00 1.56 3.48 5.34 0.00 4.48 1.45 1.32 7.53 0.00 0.00 7.53 4.45 11.88 4.77 4.06 0.00 0.00 6.18 2.63 0.00 14 E2a_E3a KnownJunction 0 35.19 5.79 27.79 7.33 3.48 0.00 2.21 4.64 9.87 14.16 23.32 19.21 12.50 20.43 55.50 7.95 3.55 21.47 4.80 12.14 13.16 0.00 3.59 15 ER2b ExonRegion 0 3.59 3.16 3.97 1.26 1.50 1.50 1.24 4.02 2.29 4.91 3.52 0.00 0.00 3.38 8.07 6.65 6.68 2.54 3.96 6.62 5.32 1.22 0.91 16 E2_Db NovelBoundary 0 0.00 3.22 3.37 3.30 4.16 8.46 8.57 6.65 7.90 7.31 7.26 30.16 0.00 12.60 0.00 15.89 0.00 12.19 9.22 8.44 14.27 2.63 4.01 17 I2_SR1 SilentIntronRegion 0 5.19 6.42 5.76 4.63 7.03 1.29 4.41 5.42 2.90 9.59 3.05 15.80 9.48 10.18 10.98 5.73 6.93 4.34 7.82 5.22 2.70 1.83 3.09 18 I2_AR1 ActiveIntronRegion 0 16.15 6.08 11.47 5.17 10.00 7.41 7.72 8.09 6.89 12.52 4.91 5.33 3.38 14.62 12.76 15.56 9.87 8.66 8.58 6.68 6.92 5.29 3.95 19 E3_Aa NovelBoundary 0 16.52 5.85 7.92 4.13 7.72 29.30 11.17 8.54 5.76 15.34 6.95 12.45 0.00 9.42 14.22 7.35 4.68 17.45 4.42 8.76 9.08 3.12 3.84 20 ER3a ExonRegion 0 40.43 22.67 88.23 45.47 16.93 15.41 24.18 44.84 49.47 101.86 79.36 23.26 15.47 106.59 188.36 121.46 90.01 69.99 77.92 62.59 91.29 43.27 65.07 21 E3_Da NovelBoundary 0 0.00 3.29 14.96 1.76 24.70 8.06 2.16 2.18 8.88 12.11 2.00 0.00 6.82 4.12 6.30 3.59 8.32 8.33 0.00 3.20 10.87 5.51 7.94 22 E3a_E4a KnownJunction 1 55.12 22.63 111.00 61.46 30.22 14.88 21.90 37.75 55.18 116.31 28.74 0.00 33.76 35.85 108.41 149.70 36.56 127.84 91.58 45.06 94.46 22.96 61.72 23 ER4a ExonRegion 0 71.96 59.12 103.32 57.03 66.73 63.50 34.31 52.69 61.29 126.64 70.00 27.39 44.07 126.84 232.28 139.12 94.81 138.02 83.28 61.57 97.31 55.63 78.62 24 E4_Da NovelBoundary 0 36.38 13.02 8.34 18.71 3.74 10.22 4.20 21.07 14.93 19.29 15.64 5.40 0.00 10.24 71.08 38.54 8.88 26.36 0.00 13.36 16.68 5.45 19.63 25 E4a_E5b KnownJunction 0 56.82 83.47 128.20 71.52 136.50 115.10 88.77 88.35 69.44 180.51 76.34 36.46 54.05 154.34 266.64 114.16 78.54 84.27 59.20 70.56 89.45 64.17 65.73 26 I4 Intron 0 45.57 32.01 12.42 11.25 11.79 11.55 12.84 12.64 8.57 18.94 12.90 6.38 6.91 22.25 26.43 34.43 18.71 18.15 12.43 8.57 8.05 9.18 11.46 27 I4_AR1 ActiveIntronRegion 0 45.80 32.16 12.48 11.31 11.84 11.60 12.89 12.70 8.61 19.03 12.96 6.41 6.95 22.36 26.56 34.60 18.80 18.24 12.50 8.62 8.09 9.23 11.52 28 E5_Aa NovelBoundary 0 58.23 68.74 11.15 15.95 43.46 2.16 17.53 20.66 13.08 23.58 12.21 13.50 6.82 40.38 59.34 17.60 8.79 9.29 17.22 5.94 5.68 9.06 12.80 29 ER5a ExonRegion 0 75.45 51.29 13.55 13.74 29.79 7.60 14.40 14.45 13.32 21.18 16.12 18.19 6.29 21.98 25.93 28.35 16.58 11.65 14.03 11.32 14.84 8.63 11.72 30 E5_Ab KnownBoundary 1 58.90 33.09 11.29 8.79 31.24 2.33 15.19 11.46 9.90 19.72 11.27 55.37 18.18 29.02 39.68 43.15 12.16 21.22 29.55 25.31 5.25 13.66 11.18 31 ER5b ExonRegion 0 122.82 103.18 147.82 104.19 114.29 120.96 83.22 116.53 92.43 209.54 108.33 35.93 38.36 249.89 343.18 172.21 139.55 143.86 117.73 106.05 137.88 93.63 116.68 32 E5a_E6a KnownJunction 0 152.10 78.80 172.17 141.64 100.93 35.09 62.40 155.26 98.29 208.74 123.03 24.46 26.62 331.57 427.22 214.73 131.00 189.36 184.29 122.98 149.01 89.71 139.48 33 E5a_E6b KnownJunction 0 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 3.00 3.15 0.00 0.00 34 I5 Intron 0 13.27 6.50 6.91 6.13 8.87 5.75 6.66 5.94 6.10 10.42 7.21 5.03 2.11 5.32 9.65 7.03 6.25 7.99 5.47 6.67 4.69 2.34 4.69 35 I5_SR1 SilentIntronRegion 0 12.75 6.97 6.94 5.98 7.93 5.58 6.69 6.58 6.26 10.13 7.29 4.87 2.13 5.39 9.98 6.33 6.00 7.34 4.80 6.76 4.89 2.38 5.00 36 I5_AR1 ActiveIntronRegion 0 22.93 4.07 13.48 9.54 9.37 1.83 9.49 3.46 8.65 16.63 10.95 8.66 3.91 9.74 0.48 23.78 11.00 12.93 3.19 8.51 9.92 0.00 2.94 37 I5_SR2 SilentIntronRegion 0 17.20 3.01 6.44 7.21 16.62 7.53 6.38 1.05 4.81 12.53 6.46 6.22 1.85 4.56 7.78 11.83 8.04 13.13 11.11 6.02 2.81 2.26 2.41 38 E6_Aa NovelBoundary 0 21.63 19.08 12.83 3.56 23.68 0.00 7.51 6.12 9.23 7.04 10.74 11.85 0.00 15.60 22.50 7.69 0.00 15.75 0.00 6.33 10.81 6.06 8.37 39 ER6a ExonRegion 0 141.75 71.67 190.76 125.57 97.34 64.18 67.99 151.12 115.83 232.17 136.82 42.83 24.59 317.76 419.11 204.35 169.15 197.56 197.49 139.27 190.95 116.00 125.88 40 E6_Ab KnownBoundary 0 245.23 137.21 221.52 139.98 151.44 109.37 102.15 172.55 144.27 272.89 156.30 66.02 34.09 350.35 481.00 258.56 207.85 209.59 211.02 176.67 225.73 151.61 146.23 41 ER6b ExonRegion 0 204.07 114.50 212.30 158.17 126.06 84.05 76.02 166.56 135.62 246.30 170.47 76.85 68.79 315.44 470.81 209.37 190.72 199.30 195.46 133.92 231.82 159.22 153.11 42 E6a_E7a KnownJunction 0 246.49 108.27 249.96 212.39 149.75 81.20 63.68 190.30 145.69 248.98 178.57 82.68 46.43 307.49 404.85 167.05 178.59 195.95 221.28 110.77 243.96 142.37 163.47 43 ER7a ExonRegion 0 121.16 99.62 234.34 178.34 128.17 102.66 70.66 180.68 149.85 273.53 176.68 66.30 49.55 260.69 466.73 192.48 193.48 195.06 202.08 157.12 211.75 136.03 127.00 44 E7_Da NovelBoundary 0 37.34 2.50 19.25 8.56 11.88 9.88 12.37 11.99 9.98 11.52 10.16 6.30 0.00 6.95 14.59 20.08 12.62 17.58 13.84 6.52 2.78 2.33 4.10 45 E7a_E8a KnownJunction 0 100.91 119.39 212.35 177.73 163.33 73.54 42.53 188.98 150.98 252.80 173.15 73.22 66.39 199.72 399.16 179.27 188.69 151.68 162.17 150.21 191.02 138.82 121.98 46 E8_Aa NovelBoundary 0 28.82 0.00 3.40 5.13 7.22 10.79 12.45 6.61 5.84 12.65 7.32 12.15 0.00 2.47 10.14 7.95 9.35 9.33 25.69 3.26 9.02 0.00 8.62 47 ER8a ExonRegion 0 68.43 55.92 187.99 169.68 73.68 45.78 37.56 147.07 147.22 244.50 134.69 61.51 60.23 183.25 401.26 164.70 132.32 145.12 188.79 124.62 133.38 162.51 98.13 48 E8_Da NovelBoundary 0 12.52 3.35 6.39 2.06 0.00 0.00 12.94 0.00 0.00 3.09 9.95 0.00 0.00 2.94 0.00 12.99 22.07 7.46 27.48 5.50 2.41 0.00 0.00 49 E8a_E9a KnownJunction 0 81.05 27.36 200.26 158.95 85.91 37.54 36.43 128.36 162.79 216.59 156.51 82.98 45.94 172.41 410.90 162.78 140.91 124.19 242.74 152.44 142.34 292.45 77.25 50 ER9a ExonRegion 0 64.43 47.18 135.16 89.37 61.77 36.36 36.88 108.82 112.89 155.91 126.99 74.90 72.83 115.57 282.62 96.13 103.55 89.80 147.62 103.98 94.19 146.35 61.63 51 E9_Da KnownBoundary 0 56.45 59.20 82.49 46.75 47.03 31.97 28.35 80.46 73.12 106.99 67.23 48.77 46.75 92.53 256.38 74.60 55.82 53.43 87.72 71.84 55.29 68.46 30.99 52 ER9b ExonRegion 0 41.83 33.18 84.55 82.60 27.53 30.55 19.06 67.09 75.86 98.45 56.00 35.32 29.37 55.82 169.57 56.78 45.95 54.75 45.77 46.42 40.25 43.37 27.43 53 E9_Db KnownBoundary 0 52.82 26.64 87.73 112.71 15.03 23.17 18.11 49.58 72.83 81.02 44.48 42.16 26.95 33.79 104.70 54.26 38.71 46.51 32.19 40.65 32.99 19.84 24.58 54 ER9c ExonRegion 0 57.29 36.20 27.17 36.83 19.47 27.75 14.85 19.57 26.42 35.89 24.87 29.98 25.80 28.75 83.29 28.98 22.39 20.91 22.40 24.36 19.10 16.77 20.53 55 IG12 Intergenic 0 0.78 2.25 0.67 0.00 1.98 8.13 3.43 0.00 0.68 0.00 1.43 13.18 1.22 1.41 4.41 1.10 0.00 0.00 0.00 0.79 0.00 0.00 1.09 56 IG12_AR6 ActiveIntergenicRegion 0 2.12 2.03 1.23 0.00 2.23 18.34 9.27 0.00 1.24 0.00 3.87 7.22 0.00 0.00 8.22 2.97 0.00 0.00 0.00 2.13 0.00 0.00 2.94 57 IG12_SR4 SilentIntergenicRegion 0 2.12 1.96 1.23 0.00 2.68 17.56 8.30 0.00 1.24 0.00 3.49 22.98 3.97 3.62 13.06 2.17 0.00 0.00 0.00 2.13 0.00 0.00 2.94 58 IG12_AR5 ActiveIntergenicRegion 0 1.35 0.00 1.11 0.00 2.68 5.83 3.85 0.00 1.01 0.00 0.88 24.80 4.69 4.87 7.12 0.00 0.00 0.00 0.00 2.13 0.00 0.00 1.07 59 IG12_AR4 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.00 3.12 3.36 0.00 0.00 0.00 0.00 0.00 20.20 1.56 5.68 2.42 0.00 0.00 0.00 0.00 1.06 0.00 0.00 0.00 60 IG12_AR2 ActiveIntergenicRegion 0 0.00 4.07 0.00 0.00 2.68 3.67 0.00 0.00 0.00 0.00 0.00 17.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 61 IG12_SR1 SilentIntergenicRegion 0 0.00 4.07 0.00 0.00 2.68 3.67 0.00 0.00 0.00 0.00 0.00 17.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62 IG12_AR1 ActiveIntergenicRegion 0 0.00 3.90 0.00 0.00 2.68 3.36 0.00 0.00 0.00 0.00 0.00 14.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00