Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DPM2 Gene 0 105.40 43.17 114.18 39.61 41.47 71.70 45.00 82.94 58.36 181.32 111.45 38.05 36.38 111.73 162.51 103.78 84.79 87.83 80.11 54.86 78.86 62.98 51.25 2 314392 Transcript 0 9.95 1.62 6.06 1.06 4.01 1.35 1.02 6.22 12.83 3.66 1.24 0.33 0.14 1.28 1.73 0.37 0.69 5.03 3.54 5.45 1.39 1.53 2.22 3 373110 Transcript 0 10.50 7.70 20.73 7.61 7.55 10.67 8.64 14.36 10.60 32.90 4.64 3.78 4.01 6.65 10.29 4.75 3.12 8.41 6.03 12.57 4.58 2.42 4.53 4 393659 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 495270 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 470181 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 473360 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.20 0.00 0.00 0.00 8 IG7 Intergenic 0 18.72 3.04 4.32 3.54 11.33 2.74 3.05 7.70 12.03 2.77 0.12 0.00 0.48 0.57 0.98 0.74 2.06 4.12 4.56 5.30 1.92 1.04 1.83 9 IG7_SR1 SilentIntergenicRegion 0 21.81 3.57 5.02 4.03 13.07 3.08 3.64 9.05 14.05 3.26 0.15 0.00 0.59 0.70 1.20 0.91 2.27 4.84 5.59 6.17 2.19 1.27 2.02 10 ER1a ExonRegion 0 9.95 1.62 6.06 1.06 4.01 1.35 1.02 6.22 12.83 3.66 1.24 0.33 0.14 1.28 1.73 0.37 0.69 5.03 3.54 5.45 1.39 1.53 2.22 11 E1_Da NovelBoundary 0 14.89 6.58 1.48 1.83 4.33 67.18 38.69 3.86 3.18 13.05 13.64 0.00 6.33 6.95 18.54 45.54 8.88 14.30 40.10 13.87 7.41 7.35 38.67 12 E1a_E1f KnownJunction 1 635.37 195.36 121.61 35.36 139.90 391.31 169.94 75.86 46.32 142.23 345.51 29.86 12.82 344.34 808.21 392.20 202.43 149.48 232.38 159.47 256.81 180.70 202.82 13 E1a_E1g NovelJunction 0 82.68 8.49 9.02 4.33 4.24 22.03 10.11 2.55 0.00 10.23 47.38 0.00 0.00 54.04 112.37 19.40 13.93 14.67 20.99 11.63 23.48 7.84 19.38 14 ER1b ExonRegion 1 181.15 68.18 45.55 17.00 41.40 151.56 60.59 27.05 23.10 60.31 121.09 7.89 7.45 87.42 224.08 114.51 70.87 60.65 89.75 51.44 108.89 58.58 82.57 15 ER1c ExonRegion 1 456.37 132.95 98.03 34.41 102.35 314.04 183.04 59.20 44.62 157.70 305.88 14.61 17.59 337.21 689.77 380.06 177.42 158.44 215.81 144.68 230.56 160.95 212.17 16 ER1d ExonRegion 0 60.40 34.26 30.60 8.32 32.86 111.11 80.69 19.41 10.55 53.46 40.69 4.33 13.95 45.43 54.23 89.47 49.60 68.84 116.80 37.64 24.01 33.50 79.44 17 E1_Ae KnownBoundary 0 56.90 46.50 49.41 9.52 49.58 75.41 80.02 28.55 19.82 77.31 39.17 0.00 6.66 31.79 36.59 53.92 50.96 77.68 105.13 42.63 21.81 32.15 49.60 18 ER1e ExonRegion 0 17.89 9.46 29.38 12.97 15.01 30.31 13.25 25.09 23.11 87.04 37.90 4.36 8.12 29.48 45.37 31.92 25.27 61.24 46.92 39.53 20.76 17.01 29.24 19 E1_Af KnownBoundary 0 14.15 20.98 31.76 9.96 26.99 43.95 9.85 33.93 13.69 81.23 30.90 6.30 13.64 19.19 26.70 0.00 13.09 57.29 21.74 29.08 11.06 19.96 19.29 20 ER1f ExonRegion 0 341.23 88.81 175.19 56.84 93.23 238.04 154.14 115.75 89.11 297.91 257.01 41.11 38.10 215.41 364.74 253.40 169.98 171.47 128.99 113.17 181.79 128.87 129.81 21 E1_Db KnownBoundary 0 19.48 43.35 56.41 24.17 23.09 73.88 23.72 30.39 30.38 85.80 23.85 25.21 0.00 23.96 27.44 28.71 24.22 37.14 29.08 43.21 20.14 18.92 3.50 22 E1b_E1g KnownJunction 0 212.19 32.23 113.89 40.69 34.97 22.09 35.29 61.82 57.78 134.52 88.50 43.66 82.46 54.15 96.92 72.97 67.04 40.29 57.41 23.14 69.19 36.99 12.63 23 E1b_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.20 0.00 0.00 0.00 24 ER1g ExonRegion 0 109.65 73.93 101.65 41.93 68.96 108.39 66.22 95.63 60.91 176.19 52.44 44.87 34.16 71.85 76.31 73.95 55.99 81.62 63.00 56.26 40.31 51.82 41.28 25 E1_Ag KnownBoundary 0 234.41 111.82 183.08 57.14 62.39 162.46 100.03 116.61 83.51 238.59 64.17 36.76 6.33 63.57 122.38 100.40 61.15 125.23 70.68 90.89 70.24 67.42 55.49 26 ER1h ExonRegion 0 378.88 100.06 292.82 89.06 90.90 135.79 101.54 188.37 127.25 440.31 462.93 92.32 88.74 267.18 444.43 205.78 244.17 177.75 204.58 142.66 292.25 141.97 93.34 27 E1_Dc KnownBoundary 0 26.38 8.75 48.55 16.85 10.95 7.67 15.68 25.14 7.90 45.88 9.74 0.00 0.00 19.42 4.45 4.02 4.77 19.23 20.52 35.99 8.03 14.94 8.28 28 E1c_E2a KnownJunction 1 195.15 81.04 312.82 81.64 83.45 164.45 72.25 169.39 117.79 461.46 258.54 20.86 67.20 605.57 1045.43 441.25 193.92 249.88 281.14 150.84 198.61 288.29 226.47 29 ER1i ExonRegion 0 10.50 7.70 20.73 7.61 7.55 10.67 8.64 14.36 10.60 32.90 4.64 3.78 4.01 6.65 10.29 4.75 3.12 8.41 6.03 12.57 4.58 2.42 4.53 30 E1_Dd NovelBoundary 0 27.56 9.54 46.01 12.32 12.31 5.39 5.83 24.11 19.50 35.65 6.79 5.70 0.00 11.77 14.34 0.00 16.74 21.93 3.58 16.75 2.59 2.57 7.94 31 I1 Intron 0 12.70 7.32 29.58 8.53 8.83 3.30 7.55 13.14 8.28 22.56 6.96 2.14 1.16 7.54 18.07 3.57 8.91 8.26 6.69 12.13 2.64 2.50 3.52 32 I1_AR1 ActiveIntronRegion 0 12.77 7.36 29.74 8.58 8.88 3.32 7.59 13.21 8.33 22.69 7.00 2.15 1.17 7.58 18.18 3.59 8.97 8.31 6.73 12.20 2.66 2.52 3.54 33 E2_Aa NovelBoundary 0 23.04 15.66 51.39 18.38 18.25 8.12 18.42 18.24 11.05 24.95 12.32 0.00 0.00 14.24 30.29 16.24 4.77 17.08 4.71 18.09 11.49 2.57 14.43 34 ER2a ExonRegion 0 252.54 90.66 375.91 117.28 85.03 161.74 102.40 242.57 175.36 567.11 399.58 109.99 100.48 423.43 612.00 389.31 297.89 292.64 258.49 139.01 285.98 217.92 169.31 35 E2_Da KnownBoundary 0 125.21 56.44 334.41 109.24 71.90 83.82 35.77 266.37 117.53 486.68 246.54 56.27 85.22 305.02 482.85 161.75 120.62 124.24 119.53 97.03 179.90 85.60 81.44 36 ER2b ExonRegion 0 284.57 67.20 456.92 184.90 86.77 104.53 63.01 325.24 199.74 646.85 441.53 104.22 143.49 376.83 526.02 333.80 304.55 309.37 282.66 167.12 270.95 215.30 146.90 37 E2_Db KnownBoundary 0 662.56 124.78 477.84 194.51 133.62 174.67 98.79 287.19 230.90 652.56 587.73 138.04 164.60 545.18 724.15 503.37 498.36 350.12 488.77 235.98 378.51 318.97 243.71 38 ER2c ExonRegion 0 175.22 44.62 183.18 65.22 36.75 58.89 34.87 121.61 71.85 281.29 191.82 88.17 111.00 205.12 349.47 164.55 174.69 94.76 137.05 79.62 143.82 115.80 75.36 39 ER2d ExonRegion 0 11.11 2.76 5.12 1.41 4.68 8.12 10.36 1.85 4.06 8.48 21.54 15.62 2.85 58.29 69.01 16.45 6.84 7.19 9.33 14.36 17.47 9.75 6.82 40 IG6 Intergenic 0 6.08 2.52 7.57 2.58 3.49 2.81 2.85 6.98 4.39 17.47 1.89 3.40 2.93 1.34 7.31 5.34 3.56 6.20 4.89 5.28 3.24 1.63 4.79 41 IG6_SR1 SilentIntergenicRegion 0 6.10 2.53 7.60 2.59 3.51 2.82 2.86 7.00 4.40 17.52 1.89 3.41 2.94 1.35 7.33 5.35 3.57 6.22 4.90 5.29 3.25 1.64 4.81