Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 UCK1 Gene 0 46.51 81.14 110.77 53.48 46.05 64.65 56.12 92.12 85.34 130.45 70.78 25.80 15.86 87.63 95.55 99.59 78.66 126.34 62.49 60.23 55.97 47.67 54.21 2 372215 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.59 3 494584 Transcript 0 3.78 0.00 6.45 2.06 24.62 9.26 1.72 10.76 3.99 9.46 11.69 6.15 0.00 9.95 4.45 8.54 7.11 10.16 4.52 3.00 2.84 0.00 4.35 4 372208 Transcript 0 0.00 0.00 1.42 0.00 0.00 0.00 3.89 7.23 1.45 3.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 459858 Transcript 0 3.88 15.75 9.44 4.54 7.08 4.75 16.87 8.64 9.66 11.83 8.96 2.98 1.62 13.44 15.12 13.44 15.33 7.47 3.54 9.20 5.12 1.88 5.97 6 491309 Transcript 0 0.91 1.32 0.37 0.00 1.66 1.25 0.84 0.53 1.35 0.73 0.00 0.00 0.00 0.90 1.14 1.20 2.13 0.00 0.00 0.00 0.72 0.00 0.00 7 372211 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 372210 Transcript 0 0.00 2.89 4.11 0.00 0.00 0.00 0.00 0.00 1.19 2.93 5.37 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 3.20 0.00 0.00 0.00 9 482398 Transcript 0 2.90 16.32 4.34 5.69 7.78 6.18 3.07 9.81 9.88 23.80 4.58 5.26 5.57 6.32 11.78 17.11 7.09 9.44 12.57 15.65 2.26 7.09 5.08 10 484876 Transcript 0 9.13 22.55 15.83 7.43 9.87 13.64 24.08 16.67 6.72 23.44 2.11 3.12 4.49 10.63 10.42 17.52 6.11 6.75 6.84 11.85 4.47 4.27 5.38 11 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.59 12 ER1b ExonRegion 0 0.00 0.00 1.23 0.00 0.00 0.00 0.00 1.73 0.00 0.92 0.00 0.00 0.00 1.30 0.00 0.00 0.00 0.00 0.00 0.00 1.76 1.67 5.29 13 ER1c ExonRegion 0 1.69 4.20 3.51 0.00 4.28 0.61 5.21 2.19 0.82 4.51 5.80 0.00 0.00 15.16 14.51 19.42 2.64 0.00 2.55 1.70 2.94 2.08 17.62 14 ER1d ExonRegion 1 2.12 8.13 4.90 0.00 8.41 1.83 10.59 3.46 1.94 6.55 9.66 0.00 0.00 24.36 17.41 26.75 3.30 0.00 3.19 2.13 4.41 2.98 35.24 15 ER1e ExonRegion 0 15.27 31.38 10.13 1.03 20.32 31.82 27.87 6.68 6.18 14.97 19.12 0.00 0.00 25.11 21.88 36.55 17.66 6.74 37.02 11.21 12.57 14.81 43.89 16 E1_Af KnownBoundary 0 24.97 25.59 13.75 3.00 20.12 59.68 23.54 4.64 11.43 11.39 9.95 0.00 0.00 12.07 24.11 18.97 25.99 23.63 66.64 15.92 12.48 23.64 28.51 17 E1_Ag KnownBoundary 0 62.23 115.90 47.31 13.88 52.63 181.71 129.44 26.62 36.75 98.48 45.64 0.00 0.00 31.67 41.78 41.44 72.56 112.88 82.73 57.91 28.05 33.68 20.49 18 ER1f ExonRegion 1 41.02 86.48 32.33 7.53 43.45 120.86 86.69 16.87 18.94 54.78 32.86 0.00 0.00 28.38 44.90 46.70 53.13 39.51 90.25 40.63 29.17 36.51 26.01 19 ER1g ExonRegion 0 13.79 62.99 36.86 11.27 36.80 55.06 56.07 26.44 27.06 60.64 19.44 0.31 0.00 20.08 26.83 19.41 37.59 45.22 32.53 31.69 22.56 14.78 7.64 20 E1_Da NovelBoundary 0 3.63 11.77 31.64 12.55 3.82 0.00 1.72 20.91 20.40 18.37 13.95 0.00 0.00 23.66 23.98 10.60 17.58 3.73 8.66 13.74 25.33 6.00 4.18 21 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E1a_E2b KnownJunction 0 0.00 2.89 4.11 0.00 0.00 0.00 0.00 0.00 1.19 2.93 5.37 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 3.20 0.00 0.00 0.00 23 E1b_E2a KnownJunction 0 0.00 0.00 1.48 0.00 0.00 0.00 0.00 2.14 0.00 2.90 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 E1b_E2b KnownJunction 0 3.33 34.53 30.54 12.92 0.00 13.57 5.79 32.94 38.05 49.37 36.32 11.55 11.85 32.32 34.49 27.77 52.73 17.33 12.14 30.04 39.23 8.82 30.65 25 ER1h ExonRegion 0 4.39 22.37 28.68 9.94 0.10 4.28 3.33 20.42 27.08 37.51 30.07 7.22 2.78 32.90 27.51 18.71 36.43 10.47 8.02 16.71 28.08 7.56 16.86 26 ER2a ExonRegion 0 2.95 0.85 9.01 3.99 1.68 1.49 0.71 10.01 5.72 6.51 5.57 0.30 0.11 5.82 9.24 3.59 3.68 6.36 2.37 6.93 2.05 0.15 3.48 27 E2_Ab KnownBoundary 0 7.19 3.35 20.93 11.55 4.33 5.62 2.21 21.36 9.40 12.36 9.16 0.00 0.00 5.47 9.15 4.36 4.77 12.02 4.71 14.45 3.15 0.00 4.01 28 ER2b ExonRegion 0 14.83 44.12 122.98 57.32 37.17 59.00 29.06 114.55 101.21 181.02 98.44 26.28 15.22 105.52 105.67 125.00 101.68 169.73 109.18 91.18 62.33 61.05 64.86 29 E2_Da NovelBoundary 0 0.00 6.25 9.99 8.42 25.72 2.84 2.25 11.54 10.30 22.27 2.68 0.00 0.00 5.12 18.54 4.36 12.81 6.92 9.60 0.00 0.00 0.00 8.19 30 E2a_E3a KnownJunction 0 16.82 85.51 200.17 97.72 155.94 315.39 145.47 148.28 120.25 226.69 146.04 73.67 32.79 120.49 99.39 92.88 120.52 163.62 81.88 104.82 89.70 53.89 74.95 31 E2a_E3b KnownJunction 0 3.78 0.00 6.45 2.06 24.62 9.26 1.72 10.76 3.99 9.46 11.69 6.15 0.00 9.95 4.45 8.54 7.11 10.16 4.52 3.00 2.84 0.00 4.35 32 E3_Aa NovelBoundary 0 9.78 12.10 5.03 5.46 7.47 5.22 34.36 6.94 2.89 10.88 10.16 24.76 5.84 26.90 19.90 12.13 26.37 13.93 0.00 5.50 0.00 6.18 0.00 33 E3_Ab NovelBoundary 0 60.16 99.72 165.87 99.25 99.07 190.34 163.27 139.98 147.51 239.39 131.09 108.34 41.07 162.40 171.83 153.04 132.40 161.88 102.69 59.25 97.55 85.79 99.62 34 ER3a ExonRegion 0 34.16 79.31 166.10 85.58 111.83 235.61 137.51 137.44 125.81 223.41 145.90 98.38 33.64 145.72 122.35 116.94 132.26 170.06 88.53 73.51 85.11 67.25 89.42 35 ER3b ExonRegion 0 62.00 124.32 152.25 75.14 67.37 117.58 100.72 151.19 142.69 242.84 133.68 67.11 36.69 159.88 132.31 152.19 163.78 211.89 103.20 82.76 94.47 83.71 113.02 36 E3a_E4a KnownJunction 0 82.09 137.15 161.79 76.61 82.77 114.48 68.54 183.11 154.54 259.33 136.67 46.97 35.55 151.98 133.26 154.75 132.02 252.12 96.85 99.90 108.48 84.87 122.07 37 ER4a ExonRegion 0 51.54 95.67 169.09 83.73 39.50 67.77 39.41 143.34 131.64 217.16 120.72 45.23 30.61 155.50 132.87 152.10 151.20 172.85 82.65 97.80 100.81 87.11 76.25 38 E4_Da KnownBoundary 0 9.63 17.56 12.09 6.79 11.54 0.00 6.27 16.22 2.75 11.01 7.79 5.40 0.00 17.25 0.00 12.22 22.63 14.05 4.42 11.31 2.84 3.12 0.00 39 E4a_E4c KnownJunction 0 41.12 99.06 127.23 75.61 46.77 72.12 45.71 128.23 140.86 174.47 73.60 60.92 75.48 139.74 110.51 113.56 108.56 187.91 58.17 82.20 84.14 70.79 88.52 40 E4a_E6b KnownJunction 0 0.00 0.00 1.42 0.00 0.00 0.00 3.89 7.23 1.45 3.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 ER4b ExonRegion 0 46.93 92.77 117.00 75.19 32.57 69.43 39.99 137.56 130.03 177.65 72.12 61.66 49.49 144.32 127.25 117.55 132.72 159.16 70.85 83.86 98.48 80.75 77.16 42 ER4c ExonRegion 0 3.88 15.75 9.44 4.54 7.08 4.75 16.87 8.64 9.66 11.83 8.96 2.98 1.62 13.44 15.12 13.44 15.33 7.47 3.54 9.20 5.12 1.88 5.97 43 E4_Ac KnownBoundary 0 7.04 20.33 12.06 6.63 3.31 4.66 27.56 10.93 12.01 16.52 4.84 5.85 13.15 2.35 10.26 3.59 15.90 4.19 3.86 12.34 3.15 2.82 0.00 44 ER4d ExonRegion 0 37.44 108.21 179.15 72.32 61.09 113.60 100.79 145.91 133.38 224.94 118.19 55.78 35.18 158.85 129.26 140.51 133.26 254.67 106.24 95.22 126.46 88.95 106.47 45 E4_Db KnownBoundary 0 0.00 19.73 14.55 2.06 7.89 4.77 8.35 11.62 8.56 25.68 10.32 5.70 0.00 0.00 14.71 22.90 18.33 19.15 12.42 6.26 0.00 5.45 8.54 46 E4b_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 E4b_E6b KnownJunction 0 27.34 74.26 146.83 70.99 98.39 153.32 123.92 105.81 123.64 168.96 119.08 32.26 54.54 188.77 139.69 136.55 130.53 200.55 96.38 50.17 133.19 63.50 90.66 48 ER4e ExonRegion 0 2.90 16.32 4.34 5.69 7.78 6.18 3.07 9.81 9.88 23.80 4.58 5.26 5.57 6.32 11.78 17.11 7.09 9.44 12.57 15.65 2.26 7.09 5.08 49 ER5a ExonRegion 0 3.66 5.27 0.02 0.00 6.62 2.21 3.37 0.00 2.11 0.00 0.00 0.00 0.00 1.13 4.57 4.79 8.50 0.00 0.00 0.00 0.41 0.00 0.00 50 E5a_E6b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.78 0.00 0.00 1.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 51 ER6a ExonRegion 0 9.13 22.55 15.83 7.43 9.87 13.64 24.08 16.67 6.72 23.44 2.11 3.12 4.49 10.63 10.42 17.52 6.11 6.75 6.84 11.85 4.47 4.27 5.38 52 E6_Ab KnownBoundary 0 10.67 21.18 12.33 10.52 22.67 14.93 23.76 17.46 7.35 17.59 0.00 5.85 0.00 10.71 16.81 7.35 0.00 6.38 12.89 3.26 6.18 2.51 0.00 53 ER6b ExonRegion 0 31.62 70.09 140.76 87.40 91.56 127.22 97.97 136.66 137.56 189.31 110.96 26.52 41.33 182.66 123.48 140.99 123.78 244.71 64.80 64.43 137.04 62.44 76.26 54 E6_Da NovelBoundary 0 36.97 20.52 95.18 67.02 42.02 67.97 46.59 91.06 80.41 107.07 62.23 7.05 13.64 60.80 47.22 71.35 77.70 135.80 13.27 45.51 50.10 32.70 34.15 55 E6b_E7a KnownJunction 0 24.52 106.17 127.41 90.43 55.86 109.37 72.69 134.97 122.42 193.92 89.08 54.47 26.78 159.63 132.15 182.52 100.98 286.40 78.97 79.51 132.39 69.74 90.66 56 ER6c ExonRegion 0 28.57 68.00 132.11 94.46 59.54 105.79 66.69 132.87 139.57 200.56 102.08 40.05 36.05 168.10 139.26 157.71 120.07 297.60 58.73 74.07 131.26 66.41 79.11 57 ER7a ExonRegion 0 31.38 68.45 150.34 82.29 56.15 96.99 62.41 138.18 146.66 218.44 96.41 56.05 62.11 180.91 132.87 251.10 132.75 307.38 112.87 105.46 118.73 92.55 128.46 58 E7_Da KnownBoundary 0 37.71 106.10 187.13 79.44 59.08 146.34 66.73 193.01 165.88 284.74 96.34 41.71 53.89 238.80 196.18 203.37 171.95 281.92 131.58 92.23 106.07 117.81 137.61 59 ER7b ExonRegion 0 81.07 135.67 135.71 61.01 74.59 109.49 93.93 119.43 121.47 194.01 113.92 38.47 20.16 140.28 123.10 157.28 116.18 195.65 74.84 81.61 91.12 64.26 84.75 60 E7_Db KnownBoundary 1 57.57 167.14 225.69 111.41 127.67 98.58 118.71 163.11 146.47 306.84 127.24 44.56 6.82 159.63 146.49 184.31 148.29 144.96 88.19 117.67 63.01 109.18 77.42 61 ER7c ExonRegion 0 68.42 101.57 149.72 73.52 54.69 62.69 62.39 113.36 100.01 134.14 73.81 23.81 12.66 83.72 127.24 104.21 78.03 128.79 72.21 66.73 50.38 52.36 53.36