Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	TTF1	Gene	0	63.18	126.17	44.10	33.38	56.72	36.87	50.07	45.48	35.14	77.20	75.11	50.53	47.29	68.53	55.42	68.49	63.14	39.75	43.09	46.88	23.12	28.87	25.40
2	245588	Transcript	0	2.28	5.94	1.13	0.00	0.00	0.99	2.04	0.00	0.00	0.53	1.78	0.00	0.00	4.25	0.00	2.06	2.29	0.00	0.00	1.96	0.00	0.00	1.81
3	334270	Transcript	0	43.44	91.96	16.35	16.52	10.96	9.02	19.71	19.80	16.05	37.01	26.87	10.18	9.30	21.84	37.08	12.88	15.29	8.40	14.84	20.75	6.65	24.93	5.69
4	461970	Transcript	0	21.20	33.75	3.10	8.40	16.92	2.78	8.43	7.39	4.20	14.48	3.15	7.19	13.84	4.32	7.25	5.27	2.40	1.19	3.03	3.02	0.32	1.28	3.46
5	ER1a	ExonRegion	0	2.28	5.94	1.13	0.00	0.00	0.99	2.04	0.00	0.00	0.53	1.78	0.00	0.00	4.25	0.00	2.06	2.29	0.00	0.00	1.96	0.00	0.00	1.81
6	ER1b	ExonRegion	1	67.33	193.70	27.38	22.53	33.28	42.81	59.08	34.46	20.15	68.64	69.40	0.00	13.19	53.04	33.27	64.64	74.17	15.88	82.62	66.42	5.99	32.75	48.00
7	E1_Da	NovelBoundary	0	6.67	13.09	9.34	8.86	12.99	5.62	8.17	7.64	4.86	10.42	7.00	0.00	0.00	0.00	6.30	38.45	18.70	7.42	42.26	9.59	0.00	9.12	0.00
8	E1a_E2a	KnownJunction	1	215.45	458.21	47.37	43.58	110.87	95.74	161.64	63.75	36.81	122.14	144.19	0.00	39.61	81.35	22.99	151.84	166.43	33.78	174.69	158.71	15.14	67.36	108.41
9	E1a_E3a	NovelJunction	0	10.89	22.30	0.00	4.00	0.00	2.67	17.14	0.00	7.96	13.05	23.01	6.30	13.64	9.89	12.61	34.09	4.77	4.68	23.34	15.08	3.15	18.43	8.62
10	E2_Aa	NovelBoundary	0	42.01	15.00	4.35	3.80	28.86	0.00	17.97	9.49	7.12	5.69	2.37	0.00	0.00	0.00	0.00	3.67	0.00	8.46	12.42	2.75	5.68	9.37	4.35
11	ER2a	ExonRegion	0	41.61	71.52	27.05	18.38	28.23	25.20	35.17	28.25	21.65	43.62	46.31	20.53	25.93	40.16	24.25	45.83	40.89	28.92	27.98	30.41	15.11	14.63	18.81
12	E2a_E3a	KnownJunction	0	72.75	105.70	57.36	52.44	54.16	42.65	64.52	63.99	43.34	117.41	98.34	69.92	55.03	124.38	82.58	129.37	86.11	80.30	54.97	90.06	59.92	34.41	35.34
13	ER3a	ExonRegion	0	52.02	134.70	57.16	44.57	70.12	51.58	60.49	62.79	49.93	117.78	108.02	85.41	109.17	126.22	75.11	127.43	119.48	91.02	60.79	89.93	51.09	37.51	33.25
14	E3_Da	NovelBoundary	0	0.00	0.00	13.39	4.06	7.64	0.00	6.58	4.44	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.00	0.00	0.00	0.00
15	E3a_E4a	KnownJunction	1	69.05	153.66	50.00	48.68	45.93	46.28	55.25	80.05	72.57	140.78	119.19	39.16	162.81	147.10	69.23	156.54	130.62	77.06	98.83	95.88	24.53	63.74	44.39
16	ER4a	ExonRegion	0	51.52	134.75	54.78	49.48	63.96	53.19	62.92	69.57	51.02	121.33	132.79	83.26	93.20	129.99	68.96	102.81	108.88	50.14	71.81	69.26	30.84	47.16	31.12
17	E4a_E5a	KnownJunction	1	118.02	246.86	49.79	52.24	107.22	66.61	79.01	70.57	50.14	106.86	179.26	70.82	242.19	126.32	97.78	101.26	122.86	52.27	75.30	65.90	27.74	44.76	36.88
18	E5_Aa	NovelBoundary	1	13.63	22.04	2.78	2.00	12.31	2.61	10.02	1.77	1.33	5.37	7.11	52.07	33.11	0.00	0.00	15.98	8.42	8.46	0.00	15.60	8.53	0.00	3.59
19	ER5a	ExonRegion	0	75.34	161.14	36.31	48.05	93.62	44.57	71.70	64.02	42.96	110.96	120.79	93.00	105.85	149.97	78.92	128.70	99.65	64.09	60.04	57.42	26.84	35.47	42.30
20	E5_Da	NovelBoundary	0	0.00	6.38	8.07	2.06	12.14	0.00	12.01	8.50	6.63	1.56	0.00	6.30	6.82	0.00	0.00	6.41	0.00	4.44	12.89	20.52	0.00	3.12	8.28
21	E5a_E6a	KnownJunction	0	94.76	203.58	33.71	61.03	123.94	55.03	61.87	73.73	48.29	98.45	133.72	95.73	81.98	157.99	97.90	135.01	103.69	73.50	101.65	51.71	19.34	34.29	44.13
22	ER6a	ExonRegion	0	50.72	101.24	42.93	36.26	56.97	41.52	63.57	66.28	45.48	96.84	96.82	82.43	74.86	113.53	55.99	83.74	99.25	65.08	49.92	49.20	26.33	33.43	26.72
23	E6a_E7a	KnownJunction	0	115.35	119.98	54.02	33.33	62.73	57.98	60.46	76.27	55.96	115.37	142.46	86.58	102.27	123.20	56.62	75.11	112.11	43.07	54.87	52.35	30.39	16.29	11.78
24	E7_Aa	NovelBoundary	0	15.78	5.79	1.21	5.23	3.82	0.00	23.89	2.55	0.00	4.89	0.00	6.30	13.15	2.59	0.00	3.93	0.00	0.00	0.00	3.26	0.00	0.00	0.00
25	ER7a	ExonRegion	0	85.53	142.65	67.12	43.08	91.17	51.81	73.42	79.35	50.43	110.52	126.73	84.91	77.89	113.06	80.68	103.06	102.71	55.16	68.38	61.67	38.34	41.74	30.08
26	E7a_E8a	KnownJunction	1	48.23	191.87	48.31	29.83	43.21	63.49	42.62	69.00	42.94	74.86	117.98	116.59	32.63	60.75	82.33	62.55	17.20	25.16	47.62	30.36	2.35	20.70	17.76
27	ER8a	ExonRegion	0	92.61	174.26	51.30	34.71	63.27	40.55	50.80	46.38	44.93	103.08	101.67	86.93	39.14	88.73	75.24	64.79	55.90	37.24	41.80	47.19	25.00	50.58	15.50
28	E8a_E9a	KnownJunction	1	137.14	277.12	51.77	33.73	147.71	41.57	62.45	60.63	54.54	132.00	98.02	107.74	0.00	115.90	69.72	70.07	78.26	39.71	40.75	66.15	27.99	35.52	15.37
29	ER9a	ExonRegion	0	83.47	265.81	57.15	46.73	134.84	76.63	104.81	54.16	44.35	116.48	123.65	82.85	44.98	75.28	97.32	68.90	91.22	34.66	51.01	61.83	19.77	47.16	32.30
30	E9a_E10b	KnownJunction	0	110.61	298.70	74.51	59.33	190.24	109.31	164.02	41.12	42.59	118.46	129.24	63.77	48.37	61.86	102.11	43.66	46.56	28.40	75.01	42.12	20.08	45.13	23.39
31	I9_SR2	SilentIntronRegion	0	21.25	22.74	9.67	7.35	20.15	4.77	9.97	9.09	7.94	9.28	4.96	7.60	9.82	5.16	8.21	9.74	3.86	3.63	2.57	8.67	2.10	3.92	3.42
32	E10_Aa	NovelBoundary	0	96.39	24.80	18.45	11.95	68.85	16.07	14.49	15.32	8.80	25.49	5.11	24.61	6.82	4.77	15.45	7.95	4.21	1.78	0.00	12.40	0.00	2.76	0.00
33	ER10a	ExonRegion	0	21.20	33.75	3.10	8.40	16.92	2.78	8.43	7.39	4.20	14.48	3.15	7.19	13.84	4.32	7.25	5.27	2.40	1.19	3.03	3.02	0.32	1.28	3.46
34	E10_Ab	KnownBoundary	1	20.82	35.45	6.36	17.31	53.06	5.11	13.38	18.85	7.75	32.74	2.47	6.45	35.55	4.94	15.95	3.85	4.77	2.07	4.24	3.00	0.00	2.45	8.71
35	ER10b	ExonRegion	0	103.66	292.98	82.16	71.45	171.66	62.63	84.58	62.61	67.16	146.29	101.53	122.04	68.92	91.94	101.00	57.13	75.80	38.59	65.54	42.65	15.87	52.43	27.43
36	E10_Da	NovelBoundary	1	10.30	5.39	3.22	6.09	7.13	2.78	7.95	12.53	2.81	21.73	0.00	5.70	22.24	0.00	4.45	3.33	7.20	0.00	9.22	6.39	0.00	0.00	4.35
37	E10a_E11a	KnownJunction	0	87.57	278.31	77.88	77.91	137.10	60.31	95.48	61.04	69.24	136.92	111.66	92.58	40.09	82.23	108.04	52.81	101.17	28.64	75.58	48.07	10.50	37.23	39.52
38	E11_Aa	NovelBoundary	0	12.67	9.27	3.52	3.16	34.55	5.34	4.42	11.75	4.77	8.06	2.42	0.00	6.82	0.00	4.45	3.67	0.00	0.00	0.00	8.50	3.09	0.00	0.00
39	ER11a	ExonRegion	0	155.45	275.23	107.32	86.10	165.65	71.75	94.45	80.32	66.35	132.14	115.29	100.67	66.87	77.70	114.95	94.92	64.59	42.36	49.34	61.65	21.87	47.44	33.04
40	E11_Da	KnownBoundary	0	210.70	301.46	91.01	57.20	229.63	130.38	154.04	83.59	52.72	118.14	81.55	82.53	31.98	67.63	126.83	63.49	57.97	25.33	51.48	67.62	25.82	26.94	38.41
41	ER11b	ExonRegion	0	238.46	285.04	91.29	53.15	198.90	103.61	120.70	72.60	49.20	112.78	83.11	72.16	43.77	70.92	131.04	65.88	60.52	29.26	47.25	48.23	26.81	28.47	42.58
42	ER11c	ExonRegion	1	212.94	236.25	85.19	45.27	87.83	41.78	42.60	64.25	48.87	104.32	85.47	73.98	23.45	68.35	131.19	68.23	33.87	30.93	49.86	49.77	20.22	39.77	35.50
43	ER11d	ExonRegion	1	99.16	217.89	63.72	44.31	52.61	34.74	47.67	50.71	44.30	98.69	73.60	55.97	32.08	55.66	114.18	88.90	64.57	41.25	62.37	74.20	39.37	45.65	47.63
44	E11_Dc	KnownBoundary	1	28.45	125.18	28.12	26.74	16.98	10.96	14.44	34.30	27.98	82.09	45.38	17.86	0.00	39.91	123.00	39.05	29.36	18.32	30.12	29.59	19.89	44.95	4.10
45	ER11e	ExonRegion	0	43.44	91.96	16.35	16.52	10.96	9.02	19.71	19.80	16.05	37.01	26.87	10.18	9.30	21.84	37.08	12.88	15.29	8.40	14.84	20.75	6.65	24.93	5.69
46	IG39_AR4	ActiveIntergenicRegion	0	9.42	12.27	3.68	3.52	9.49	5.50	2.65	0.11	3.63	3.96	0.62	8.52	4.39	3.88	12.45	5.37	3.30	0.00	3.19	4.26	0.00	4.44	0.00