Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DBH Gene 0 4.73 52.16 100.57 699.15 878.73 885.65 1668.22 3214.10 3422.10 6812.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2362.39 1135.79 77.81 1.14 1.58 1.03 2 393056 Transcript 0 0.18 31.11 43.56 387.65 637.11 788.65 1440.88 1992.09 2246.31 4937.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1621.97 752.63 70.83 0.00 0.00 0.00 3 371880 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 263611 Transcript 0 0.00 0.00 0.00 0.00 2.68 3.67 10.59 3.46 7.41 13.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.54 0.00 0.00 0.00 0.00 0.00 5 IG20_SR1 SilentIntergenicRegion 0 1.24 0.89 6.25 3.49 0.10 0.58 10.25 9.76 6.46 0.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.03 17.04 11.46 0.00 0.00 0.01 6 IG20_AR1 ActiveIntergenicRegion 0 1.13 3.01 11.66 5.14 0.00 0.98 27.02 10.21 12.82 0.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.53 32.57 21.63 0.00 0.00 0.00 7 IG20_SR2 SilentIntergenicRegion 0 0.69 1.84 13.43 6.11 0.16 1.23 12.10 11.79 9.81 0.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30.29 28.19 20.87 0.00 0.00 0.00 8 IG20_AR2 ActiveIntergenicRegion 0 1.15 3.30 7.80 6.79 0.69 1.86 19.23 17.48 12.00 0.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53.30 44.99 26.59 0.00 0.00 0.00 9 IG20_SR3 SilentIntergenicRegion 0 0.47 2.75 7.44 6.37 0.00 1.12 16.53 12.42 13.28 0.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47.31 41.43 27.20 0.00 0.00 0.00 10 IG20_AR3 ActiveIntergenicRegion 0 0.00 1.53 1.10 1.16 0.00 4.85 11.39 0.00 5.27 0.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.72 26.79 5.79 0.00 0.00 0.00 11 IG20_AR4 ActiveIntergenicRegion 0 0.53 1.02 6.70 3.45 0.00 1.50 6.87 3.78 9.97 0.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.69 35.23 13.54 0.00 0.00 0.00 12 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 2.75 6.29 0.00 0.31 1.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.39 0.00 0.00 0.00 0.00 0.00 13 ER1b ExonRegion 0 0.00 3.39 2.94 15.08 141.46 241.21 319.34 187.02 258.80 707.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 248.71 181.14 8.09 0.00 0.00 0.00 14 ER1c ExonRegion 0 0.33 13.07 31.10 195.00 349.06 448.98 644.60 1312.27 1570.62 3754.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1326.16 615.66 54.17 0.00 0.00 0.00 15 E1a_E2a KnownJunction 0 0.00 28.22 57.36 467.07 1116.81 1344.91 2206.10 2352.72 2710.79 6004.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1683.30 766.99 78.04 0.00 0.00 0.00 16 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 34.21 44.29 34.54 16.43 6.97 159.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.94 12.99 0.00 0.00 0.00 0.00 17 ER2a ExonRegion 0 0.73 45.36 58.78 499.34 638.41 893.15 1559.98 2824.29 3159.71 6825.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2299.33 1127.73 89.64 0.00 0.00 0.00 18 E2a_E3a KnownJunction 0 0.00 50.85 58.10 584.17 793.21 913.79 1991.16 2791.35 3114.44 6918.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2503.87 1115.80 115.63 0.00 0.00 0.00 19 ER3a ExonRegion 0 1.49 41.07 77.90 590.72 860.75 963.18 1776.01 3231.33 3808.71 7798.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2990.56 1387.40 89.22 0.00 0.00 0.00 20 E3a_E4a KnownJunction 0 3.48 63.34 101.65 829.90 1409.42 1386.25 2578.79 4097.55 4785.86 9273.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3757.33 1484.37 89.10 0.00 0.00 0.00 21 ER4a ExonRegion 0 1.48 42.80 77.99 637.08 840.93 1006.46 1816.70 3137.02 3633.14 7470.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2919.50 1386.46 82.40 0.00 0.00 0.00 22 E4a_E5a KnownJunction 0 0.00 62.62 67.59 559.14 996.01 1066.89 1774.72 3067.49 3351.12 7171.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2496.16 1161.54 44.29 0.00 0.00 0.00 23 ER4b ExonRegion 0 0.00 0.00 0.00 0.00 2.68 3.67 10.59 3.46 7.41 13.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.54 0.00 0.00 0.00 0.00 0.00 24 ER5a ExonRegion 0 1.05 61.90 74.41 687.25 1113.84 1231.78 2231.32 3359.93 3747.17 7362.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3187.98 1554.58 87.69 0.00 0.00 0.00 25 E5a_E6a KnownJunction 0 0.00 47.89 90.51 707.90 1224.45 1460.58 2454.96 3702.78 4088.73 7709.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2788.03 1698.21 83.41 0.00 0.00 0.00 26 ER6a ExonRegion 0 0.87 35.26 90.43 693.20 684.17 820.99 1695.05 3765.32 4231.07 8576.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2247.45 1120.35 99.31 0.00 0.00 0.00 27 E6a_E7a KnownJunction 0 3.63 47.95 138.26 1077.59 787.86 815.27 1731.05 4865.88 5316.55 10449.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3869.13 1177.16 97.03 0.00 0.00 0.00 28 ER7a ExonRegion 0 1.98 68.49 130.86 962.78 1044.90 1270.49 2378.80 4731.63 5103.20 10039.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3586.03 1709.46 119.74 0.00 0.00 0.00 29 E7a_E8a KnownJunction 0 0.00 93.14 115.13 1074.59 1995.16 2055.07 3972.74 4642.64 5182.12 9726.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4092.11 1835.16 134.16 0.00 0.00 0.00 30 E7a_E9a NovelJunction 0 0.00 0.00 3.67 56.10 26.83 63.43 92.43 29.16 36.28 106.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36.23 22.12 0.00 0.00 0.00 0.00 31 ER8a ExonRegion 0 0.00 83.48 137.93 1191.93 1329.98 1474.75 2763.96 4969.53 5561.82 10336.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3102.42 1377.06 97.33 0.00 0.00 0.00 32 E8a_E9a KnownJunction 0 0.00 126.49 142.63 1134.09 1466.72 1416.46 2892.97 4567.84 4730.16 8924.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2427.68 1450.58 97.67 0.00 0.00 0.00 33 ER9a ExonRegion 0 1.20 62.06 156.38 1115.98 1084.17 1124.45 2195.46 4824.52 5294.07 10247.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2771.56 1264.85 90.78 0.00 0.00 0.00 34 E9a_E10a KnownJunction 0 3.48 69.66 174.54 1188.69 1278.61 1069.72 2310.95 5470.65 5988.25 11546.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4035.90 1345.54 100.99 0.00 0.00 0.00 35 E10_Aa NovelBoundary 0 15.63 8.88 35.01 36.93 61.29 20.27 96.94 89.66 85.53 119.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54.64 17.69 3.13 2.78 2.14 4.35 36 ER10a ExonRegion 0 14.96 78.10 203.07 1361.96 1117.73 1091.11 2004.62 5628.37 5944.32 11654.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4709.80 2226.77 120.73 0.88 3.35 1.17 37 E10_Da NovelBoundary 0 7.19 6.64 58.51 45.62 36.93 8.40 53.30 99.60 71.87 154.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 77.60 45.46 0.00 3.15 5.69 3.50 38 E10a_E11a KnownJunction 0 6.96 111.16 213.03 1774.83 1643.63 1890.62 3313.17 6423.82 6395.88 12839.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5314.37 2676.78 161.39 0.00 0.00 0.00 39 Ix Intron 0 8.76 6.68 25.34 20.77 18.89 9.82 28.85 59.57 45.25 89.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48.53 28.30 5.96 5.36 2.54 1.07 40 Ix_SR1 SilentIntronRegion 0 7.28 8.30 28.73 25.89 21.96 13.37 33.78 69.12 47.26 100.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58.84 29.12 6.11 4.98 3.03 1.70 41 Ix_AR1 ActiveIntronRegion 0 9.84 5.63 23.23 17.44 16.94 7.48 25.69 53.54 44.24 83.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41.89 27.96 5.90 5.67 2.22 0.65 42 E11_Aa NovelBoundary 0 3.78 6.05 14.78 20.91 43.55 13.17 55.51 60.91 66.49 144.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 68.52 34.92 6.20 10.81 0.00 0.00 43 ER11a ExonRegion 0 4.76 82.92 205.27 1283.48 1341.80 1462.72 2853.50 5222.47 5300.49 10332.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3901.94 1713.31 92.06 0.70 1.97 0.00 44 E11_Da NovelBoundary 0 0.00 12.17 66.50 24.61 4.16 0.00 12.37 5.22 4.25 5.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.12 12.24 3.07 2.97 0.00 3.76 45 E11a_E12a KnownJunction 0 13.34 126.62 261.02 1821.85 1782.43 1448.14 3006.82 5996.40 5807.81 11201.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4657.08 2026.03 93.26 0.00 0.00 0.00 46 I11 Intron 0 14.13 11.09 26.08 8.74 11.50 8.45 12.81 17.81 12.02 16.54 0.00 0.00 0.00 0.00 0.00 0.00 0.51 12.70 16.39 4.74 3.55 4.48 0.45 47 I11_AR2 ActiveIntronRegion 0 7.98 9.85 34.00 11.48 16.69 8.77 13.47 25.18 17.33 22.21 0.00 0.00 0.00 0.00 0.00 0.00 0.54 18.12 16.92 6.29 3.19 4.61 0.41 48 I11_SR2 SilentIntronRegion 0 32.22 17.93 27.55 10.71 11.38 13.42 18.69 18.76 12.07 18.55 0.00 0.00 0.00 0.00 0.00 0.00 0.83 11.86 25.52 5.71 5.14 7.15 0.87 49 E12_Aa NovelBoundary 0 10.67 33.74 25.78 9.56 18.34 14.93 19.52 40.46 14.24 27.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25.20 22.12 9.52 2.66 8.76 16.22 50 ER12a ExonRegion 0 8.66 60.80 106.77 690.57 963.94 769.38 1530.53 2862.63 2791.30 5282.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1676.17 856.12 62.09 2.84 3.51 2.62 51 IG21 Intergenic 0 4.37 2.52 15.09 10.87 38.55 11.17 36.55 97.82 169.36 315.65 0.00 0.06 0.00 0.00 0.00 0.00 0.06 16.68 23.00 2.75 2.89 2.92 2.16 52 IG21_SR1 SilentIntergenicRegion 0 4.65 2.45 14.82 11.42 39.55 12.11 37.12 97.86 169.84 317.15 0.00 0.07 0.00 0.00 0.00 0.00 0.07 17.62 24.87 2.71 3.13 2.68 2.15 53 IG21_AR1 ActiveIntergenicRegion 0 2.80 3.02 17.02 7.69 33.32 5.53 34.00 99.95 170.36 313.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.16 11.85 3.03 1.46 4.43 2.33