Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NEK6 Gene 0 29.77 8.84 26.30 7.84 15.97 19.53 11.80 36.64 32.85 13.52 502.33 325.71 285.00 333.38 115.42 266.40 572.64 3.53 4.82 12.04 212.51 211.56 188.90 2 373603 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.42 0.00 0.00 1.24 1.54 5.05 10.33 0.00 0.00 0.00 0.00 0.46 0.00 3 373600 Transcript 0 1.06 0.51 0.00 0.00 0.00 0.00 0.33 0.00 0.00 0.00 7.33 0.00 0.00 6.90 2.90 5.57 10.32 0.00 0.80 0.00 1.93 4.43 4.77 4 373601 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 320246 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 444973 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 454453 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 373596 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 425237 Transcript 0 0.00 0.00 0.61 0.00 0.00 0.00 1.32 0.00 1.08 0.00 9.06 2.16 0.00 2.44 0.00 5.33 3.30 0.00 0.00 0.00 2.24 2.60 10.32 10 423785 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.61 0.00 0.00 0.00 1.04 0.00 0.00 5.27 0.06 2.45 9.34 0.00 0.00 0.00 1.02 0.00 1.38 11 422297 Transcript 1 0.49 0.00 1.24 0.00 1.86 3.40 0.00 1.19 1.80 0.00 51.65 0.22 0.00 35.34 8.40 15.56 46.57 0.00 0.00 0.00 4.60 3.86 5.82 12 394199 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 447379 Transcript 0 0.94 0.00 0.54 0.00 0.00 0.81 0.20 0.00 0.00 0.25 0.01 0.53 0.00 1.00 0.30 1.75 3.42 0.00 0.00 0.00 1.62 0.31 3.03 14 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.85 0.00 0.00 2.48 3.08 5.74 12.44 0.00 0.00 0.00 0.00 0.92 0.00 15 E1a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.36 8.23 0.00 0.00 0.00 0.00 0.00 0.00 16 ER2a ExonRegion 0 2.12 1.02 0.00 0.00 0.00 0.00 0.66 0.00 0.00 0.00 12.08 0.00 0.00 13.81 5.80 11.15 20.63 0.00 1.59 0.00 3.86 8.85 9.54 17 ER2b ExonRegion 0 4.76 2.03 0.61 0.00 0.00 0.46 1.32 2.59 2.16 0.86 52.19 0.00 0.00 47.51 26.11 75.05 103.15 0.00 3.19 0.53 32.50 19.27 38.18 18 ER2c ExonRegion 1 12.90 1.70 3.94 0.13 0.00 2.42 1.69 7.91 4.44 2.45 115.10 6.32 0.00 62.80 42.08 107.64 153.42 1.22 1.25 1.87 58.20 37.21 48.21 19 E2a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 E2a_E9a KnownJunction 1 0.00 0.00 1.80 1.40 0.00 2.90 0.00 0.00 1.79 2.31 59.91 17.41 0.00 14.13 19.66 8.54 71.06 0.00 0.00 0.00 56.53 10.84 11.95 21 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER3b ExonRegion 0 4.57 0.00 1.35 0.74 0.67 2.68 0.08 0.67 0.00 0.11 9.95 2.34 0.00 4.76 4.61 3.77 18.02 0.00 0.00 0.00 11.61 5.85 18.12 23 E3a_E9a KnownJunction 0 3.19 0.00 2.81 3.60 4.33 2.16 0.00 2.55 0.00 1.10 37.75 5.70 0.00 9.18 4.45 28.11 24.87 0.00 0.00 0.00 42.07 12.12 19.21 24 I3_AR2 ActiveIntronRegion 0 10.55 1.61 6.61 0.00 4.97 1.83 3.01 0.82 1.20 0.00 14.17 7.70 0.00 4.82 5.39 25.81 15.98 0.00 0.00 1.72 11.26 1.69 18.60 25 ER4a ExonRegion 0 7.06 0.97 4.31 0.00 0.00 2.62 1.76 2.46 2.55 0.00 9.66 14.08 0.00 8.20 4.23 4.75 30.08 0.00 0.00 1.01 8.20 23.17 20.42 26 E4a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 E4b_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.90 0.00 0.00 0.00 0.00 7.69 0.00 0.00 0.00 0.00 2.29 3.12 7.43 28 ER4b ExonRegion 0 0.00 0.00 1.23 0.00 0.00 0.00 2.65 0.00 2.16 0.00 8.21 4.33 0.00 4.87 0.00 2.97 6.60 0.00 0.00 0.00 2.20 2.08 13.21 29 I4_AR2 ActiveIntronRegion 0 3.69 0.00 5.06 1.07 1.48 0.51 0.68 6.55 0.81 1.15 3.54 0.00 0.00 8.95 2.59 13.66 37.50 0.00 0.00 0.50 11.02 2.84 40.36 30 I4_AR4 ActiveIntronRegion 0 5.03 0.00 3.52 1.36 2.68 0.00 0.00 1.73 3.71 0.00 9.66 17.86 4.69 19.49 9.07 12.63 45.39 0.00 0.00 0.00 25.34 8.33 40.01 31 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 1.22 0.00 0.00 0.00 2.08 0.00 0.00 10.54 0.11 1.05 14.76 0.00 0.00 0.00 2.03 0.00 2.76 32 E5a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.85 3.93 0.00 0.00 0.00 0.00 0.00 0.00 33 ER6a ExonRegion 0 0.98 0.00 2.47 0.00 3.72 6.80 0.00 2.39 1.99 0.00 59.71 0.43 0.00 53.49 12.34 27.02 57.89 0.00 0.00 0.00 9.20 7.73 7.80 34 E6a_E7a NovelJunction 0 0.00 0.00 1.54 0.00 0.00 0.00 0.00 0.00 0.00 1.16 45.85 0.00 13.15 42.20 9.52 55.28 51.61 0.00 0.00 0.00 2.78 5.94 12.80 35 E6a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 43.59 0.00 0.00 17.19 4.45 4.10 35.25 0.00 0.00 0.00 0.00 0.00 3.84 36 ER7a ExonRegion 0 2.39 0.00 2.48 0.00 0.00 1.01 0.78 4.07 2.56 1.63 54.56 8.01 10.34 35.77 17.06 44.77 70.14 0.00 0.00 0.18 12.37 10.62 29.33 37 E7_Ab KnownBoundary 0 0.00 0.00 4.82 0.00 0.00 0.00 0.00 5.09 1.79 3.25 87.29 5.55 25.49 56.51 18.54 82.88 94.44 0.00 0.00 0.00 10.81 3.12 52.75 38 ER7b ExonRegion 0 2.26 0.00 4.85 0.00 0.00 1.73 0.00 5.67 1.90 1.94 91.14 11.73 19.15 83.03 16.12 48.67 124.24 0.00 0.00 2.72 9.24 8.04 30.35 39 E7a_E9a KnownJunction 1 3.48 0.00 7.27 0.00 0.00 5.45 0.00 6.82 0.00 1.53 106.87 22.66 7.95 90.47 17.80 47.08 140.53 0.00 0.00 0.00 16.93 14.08 21.43 40 ER8a ExonRegion 0 1.87 0.00 1.08 0.00 0.00 1.62 0.39 0.00 0.00 0.50 0.02 1.05 0.00 1.99 0.60 3.50 6.83 0.00 0.00 0.00 3.25 0.61 6.06 41 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 ER9a ExonRegion 1 7.11 2.00 34.48 3.34 3.76 2.20 4.06 21.24 22.27 10.30 456.51 57.59 60.38 246.29 115.51 217.17 488.75 3.25 5.57 5.27 196.69 126.87 153.27 43 E9a_E10a KnownJunction 1 2.74 3.16 71.02 7.76 8.32 0.00 4.50 32.04 26.59 15.66 578.88 151.85 94.64 446.00 286.05 518.84 559.23 11.86 15.91 8.95 259.03 253.08 358.35 44 E9a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.12 0.00 45 ER10a ExonRegion 1 15.76 2.65 56.93 9.38 9.87 22.81 7.55 32.19 30.58 14.41 762.78 162.55 133.48 453.01 172.24 344.13 747.50 4.17 3.43 11.69 318.96 241.90 206.65 46 E10a_E11a KnownJunction 1 39.12 2.57 77.67 11.39 12.39 57.64 6.54 50.69 31.54 16.79 831.79 220.72 231.64 539.18 207.18 349.14 925.38 1.82 0.00 20.96 361.03 240.95 207.77 47 ER11a ExonRegion 1 26.31 5.87 59.71 8.93 10.92 36.85 7.67 52.92 44.13 17.22 963.99 251.59 219.98 529.05 223.95 441.71 1063.57 7.07 3.29 12.73 413.14 299.20 253.20 48 E11a_E12a KnownJunction 0 42.60 12.76 52.48 2.83 14.69 19.99 13.34 56.56 60.62 12.65 1191.25 511.97 384.55 592.80 288.65 550.97 1291.54 9.24 4.05 11.25 542.90 418.41 342.56 49 ER12a ExonRegion 0 61.86 13.01 65.42 13.67 12.10 22.20 12.86 60.51 56.31 22.00 1170.12 500.77 368.23 695.30 249.48 566.61 1169.91 4.46 3.90 17.39 459.70 394.52 308.98 50 E12a_E13a KnownJunction 0 71.86 8.42 76.61 9.99 19.10 50.71 16.43 74.22 56.48 32.72 1112.70 426.44 483.57 776.98 332.78 632.40 1304.44 0.00 0.00 14.00 491.69 401.94 291.86 51 ER13a ExonRegion 0 54.11 4.74 61.37 7.32 13.87 28.62 16.44 57.81 59.82 19.69 1033.41 525.69 402.42 580.20 262.83 498.93 1066.28 4.01 1.93 14.45 494.88 356.25 274.00 52 E13_Da KnownBoundary 0 27.34 13.09 62.80 5.43 15.28 56.27 18.02 58.24 64.52 17.06 967.09 562.68 335.53 532.11 192.35 442.53 939.78 6.67 8.75 11.63 437.38 311.98 296.30 53 ER13b ExonRegion 0 11.29 8.32 42.85 5.04 11.92 54.46 26.20 46.88 51.43 19.67 952.27 474.67 326.45 588.82 193.50 448.16 848.43 6.10 4.92 10.64 435.53 317.45 282.36 54 E13b_E14a KnownJunction 0 5.93 11.58 34.48 6.66 15.45 64.62 40.81 41.16 45.66 26.27 918.39 427.34 358.42 570.73 240.81 488.08 908.74 8.42 0.00 8.76 439.36 370.65 292.80 55 ER14a ExonRegion 0 13.33 8.32 54.82 10.28 26.39 34.55 18.39 47.34 54.80 24.97 854.23 485.34 382.89 517.67 221.49 480.91 934.34 4.82 3.16 16.31 436.44 330.30 282.82 56 E14a_E15a KnownJunction 0 33.78 21.71 68.30 9.92 18.85 38.84 6.36 47.48 54.31 22.70 740.19 668.77 810.01 628.06 253.79 907.03 975.22 6.76 0.00 16.49 354.66 311.98 538.13 57 ER15a ExonRegion 0 23.34 13.63 70.61 7.70 12.66 29.64 6.08 38.49 47.40 17.79 724.47 783.75 821.77 593.99 310.28 996.39 832.99 11.34 4.13 12.77 342.94 481.41 623.52 58 E15_Da KnownBoundary 0 12.74 5.66 32.02 4.83 11.54 4.83 0.00 23.78 22.48 7.63 216.48 161.75 161.35 116.31 57.36 381.44 247.03 0.00 0.00 0.00 104.22 142.98 199.07 59 E15_Db KnownBoundary 0 0.00 0.00 3.67 0.00 0.00 0.00 0.00 0.00 3.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 60 E15_Dc KnownBoundary 0 3.26 5.66 44.00 4.59 4.07 15.22 2.12 26.12 28.18 3.12 395.63 116.14 181.64 248.04 95.19 626.33 484.06 13.43 0.00 7.41 184.59 546.94 403.68 61 ER15b ExonRegion 0 21.17 12.20 77.20 6.81 8.03 31.17 3.97 36.30 53.11 13.76 761.56 701.37 675.36 594.43 385.87 1075.91 838.43 12.93 6.37 19.15 357.00 745.90 695.98 62 ER15c ExonRegion 0 25.05 11.52 77.61 7.95 10.70 24.76 7.28 40.91 54.76 14.91 786.37 658.80 581.56 603.90 414.88 1037.77 849.98 12.93 10.62 15.25 376.47 778.19 672.00 63 ER15d ExonRegion 0 22.00 13.08 72.25 5.24 17.26 22.87 12.80 39.48 55.73 16.51 1394.87 471.74 444.08 587.80 291.72 648.97 1429.42 14.49 8.37 15.64 579.92 551.23 452.76 64 E15d_E16a KnownJunction 1 24.67 19.67 70.67 4.79 25.04 37.02 19.74 37.83 55.35 24.87 1715.22 350.36 397.54 445.29 179.00 334.19 1870.12 6.72 0.00 18.47 697.10 247.32 258.99 65 ER16a ExonRegion 0 25.83 11.49 52.25 9.48 21.05 30.78 11.80 41.13 54.08 20.55 1083.75 497.69 382.74 594.85 186.40 432.03 1137.18 5.29 11.49 13.20 409.77 288.67 309.34 66 E16_Da NovelBoundary 0 32.38 11.84 39.62 5.76 28.18 29.59 14.71 22.06 42.62 12.97 526.76 373.62 367.18 539.65 172.08 282.92 724.64 4.64 3.76 5.24 241.43 190.01 207.01 67 E16b_E17a KnownJunction 1 260.42 10.98 65.91 7.33 53.74 66.61 60.37 43.00 80.00 24.07 2194.29 412.18 442.67 633.41 309.79 1638.12 2293.69 19.65 12.05 23.20 835.29 945.26 1140.71 68 ER16b ExonRegion 0 97.78 10.57 56.61 6.38 31.04 41.81 26.16 33.53 67.59 18.90 1299.29 380.99 394.71 572.60 209.01 831.72 1402.48 15.45 6.24 13.28 496.01 497.79 559.49 69 E17_Aa NovelBoundary 0 58.68 0.00 1.83 0.00 14.69 2.44 4.11 9.24 11.78 6.50 53.22 34.81 26.95 12.30 9.64 29.99 64.33 0.00 0.00 5.43 32.43 59.21 78.02 70 ER17a ExonRegion 0 46.91 10.69 30.27 12.52 27.59 25.26 18.40 50.82 42.21 17.67 622.11 413.45 278.37 428.78 149.85 306.82 699.75 3.84 6.12 14.51 231.54 269.08 236.59 71 E17_Da KnownBoundary 1 54.16 24.40 9.64 6.33 16.98 22.54 22.13 45.80 31.22 19.61 536.77 394.48 401.76 348.82 54.52 224.47 741.47 2.49 12.99 6.01 166.86 293.68 147.34 72 ER17b ExonRegion 1 28.05 16.03 16.07 7.11 13.20 21.74 11.78 42.33 36.82 15.39 383.59 468.65 583.97 309.38 71.97 250.15 536.64 4.37 7.37 19.17 216.78 218.88 186.88 73 IG9 Intergenic 0 15.71 5.25 11.79 3.93 9.50 16.59 3.42 29.10 23.17 10.48 213.39 167.73 194.49 204.32 59.66 189.95 290.88 4.15 7.20 6.87 144.38 132.49 124.18 74 IG9_AR1 ActiveIntergenicRegion 0 15.91 5.32 11.94 3.98 9.62 16.80 3.46 29.46 23.46 10.62 216.05 169.77 196.95 206.86 60.42 192.25 294.52 4.20 7.29 6.96 146.19 134.13 125.73