Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	RP11-27I1.2	Gene	0	36.49	72.54	41.31	51.99	100.99	37.10	26.85	56.22	68.79	39.61	57.90	127.01	100.95	124.43	87.81	92.88	78.25	16.96	19.55	16.62	32.54	20.91	10.80
2	442982	Transcript	0	4.76	7.17	6.68	4.45	20.14	5.09	2.78	9.68	11.52	5.25	23.24	4.01	2.81	47.51	44.51	32.34	28.15	6.54	4.30	3.03	11.40	4.02	4.85
3	458394	Transcript	0	23.84	46.59	21.47	25.11	65.89	24.43	22.29	26.39	35.36	18.92	38.79	154.97	116.80	56.73	33.62	47.34	52.38	5.78	7.09	5.86	11.71	10.56	5.52
4	447891	Transcript	0	30.20	71.11	37.36	50.54	93.46	31.07	26.82	41.16	53.75	36.78	39.33	125.03	90.03	77.24	68.42	53.62	53.11	10.43	12.51	15.68	17.21	20.14	6.68
5	432640	Transcript	0	4.52	18.31	10.24	11.12	18.25	9.51	6.64	8.17	21.42	13.39	17.44	60.50	47.44	59.03	16.10	25.15	26.95	5.78	4.56	9.44	14.33	6.79	7.00
6	450803	Transcript	0	12.07	10.19	5.75	6.60	24.15	6.88	6.68	2.38	11.78	5.55	18.94	46.44	45.95	39.99	30.35	18.64	15.14	2.13	7.96	1.78	13.37	3.95	3.56
7	ER1a	ExonRegion	0	9.52	14.34	13.35	7.37	32.73	10.18	5.56	16.81	18.11	10.51	33.69	8.02	5.63	63.76	53.29	64.68	44.23	13.09	8.60	6.06	22.80	5.10	9.69
8	E1_Da	NovelBoundary	1	0.00	29.07	30.16	20.38	92.02	13.86	0.00	16.63	15.42	0.00	5.00	0.00	0.00	93.53	23.73	36.40	8.13	0.00	0.00	0.00	25.08	2.51	0.00
9	E1a_E2c	KnownJunction	0	0.00	0.00	0.00	1.53	7.56	0.00	0.00	2.55	4.92	0.00	12.79	0.00	0.00	31.26	35.73	0.00	12.06	0.00	0.00	0.00	0.00	2.94	0.00
10	E1a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.73	8.01	0.00	6.95	0.00	7.30	14.66	13.85	0.00	9.35	0.00	0.00	0.00	8.71	0.00	0.00
11	I1	Intron	0	36.69	61.86	46.31	38.68	65.95	27.97	23.42	40.92	65.46	37.33	35.24	79.84	85.61	91.94	58.01	105.17	70.02	26.21	16.39	15.36	32.61	14.12	13.25
12	I1_AR1	ActiveIntronRegion	0	36.82	62.08	46.48	38.82	66.18	28.07	23.51	41.07	65.69	37.47	35.37	80.10	85.91	92.27	58.22	105.53	70.26	26.30	16.45	15.42	32.72	14.17	13.30
13	E2_Aa	NovelBoundary	1	10.37	105.64	59.61	36.13	60.61	15.16	35.95	91.51	115.05	51.25	60.02	203.77	173.04	82.76	65.39	53.92	120.24	11.94	16.38	9.20	31.38	14.76	15.54
14	ER2a	ExonRegion	1	42.58	71.00	39.66	38.23	87.19	36.37	36.01	47.59	58.29	32.05	53.46	196.57	199.51	81.37	45.56	83.71	83.58	12.17	14.97	11.05	18.55	19.47	8.86
15	E2_Ab	NovelBoundary	0	16.00	49.79	41.10	41.59	103.06	33.11	34.05	28.42	56.89	21.46	64.02	201.82	143.66	70.93	29.30	44.18	56.38	4.10	0.00	5.62	14.02	5.39	0.00
16	E2_Da	NovelBoundary	1	11.04	58.28	16.76	20.74	44.65	10.22	13.87	15.44	30.73	24.26	42.96	114.49	79.54	55.68	10.01	12.30	63.39	5.39	9.60	3.00	3.09	12.06	0.00
17	E2a_E2c	KnownJunction	0	9.78	6.71	11.86	17.31	23.09	4.43	12.72	15.98	20.83	8.62	35.75	61.07	72.56	19.60	6.30	12.65	38.62	1.78	0.00	3.13	11.68	0.00	0.00
18	ER2b	ExonRegion	1	15.66	35.55	22.35	21.26	58.65	17.31	21.13	23.37	37.55	22.71	51.26	147.55	128.13	55.09	15.55	27.94	63.51	3.62	6.37	4.60	15.78	5.67	0.00
19	ER2c	ExonRegion	1	9.03	38.14	14.83	22.07	50.18	21.38	18.76	8.57	24.23	23.99	20.11	108.79	74.79	36.63	22.01	23.68	36.66	3.68	3.08	7.94	3.96	15.69	0.00
20	E2_Ac	KnownBoundary	0	18.37	36.84	15.67	33.86	103.90	10.79	18.20	4.11	31.89	28.96	23.32	91.53	107.62	43.03	33.01	14.61	34.22	0.00	8.94	5.24	5.75	8.94	0.00
21	ER2d	ExonRegion	0	18.88	63.07	32.52	47.00	95.98	27.43	21.73	33.87	68.14	34.12	73.38	215.96	118.38	107.70	64.81	56.69	71.22	4.56	5.71	11.72	16.26	23.05	5.82
22	E2_Db	KnownBoundary	1	30.75	93.67	24.78	47.78	95.25	31.46	27.34	32.28	51.07	40.05	26.06	180.51	180.67	84.64	37.70	46.06	35.25	6.18	9.51	8.44	5.31	23.02	3.84
23	E2b_E5a	KnownJunction	0	0.00	0.00	11.35	11.79	11.46	8.23	1.99	4.72	8.16	0.00	14.64	75.47	33.28	2.47	13.35	0.00	8.88	0.00	0.00	0.00	5.50	8.57	0.00
24	ER2e	ExonRegion	1	19.15	62.08	12.88	19.78	87.40	32.48	18.14	15.60	26.96	16.09	27.16	207.27	78.32	69.23	48.99	45.66	34.95	3.40	6.29	3.40	4.90	12.21	7.71
25	E2_Dc	NovelBoundary	1	0.00	54.79	16.74	10.19	84.04	39.69	32.46	25.38	18.52	14.94	24.80	313.30	115.90	63.87	24.85	81.18	34.78	2.49	4.05	12.66	11.80	26.51	7.17
26	I2	Intron	0	6.69	31.82	8.24	15.58	47.50	21.25	12.35	19.38	19.94	15.94	29.95	136.74	64.08	78.46	26.60	56.79	38.73	9.40	10.06	10.24	11.60	11.91	6.19
27	I2_AR1	ActiveIntronRegion	1	6.71	31.91	8.27	15.62	47.64	21.30	12.39	19.43	20.00	15.99	30.04	137.13	64.26	78.68	26.68	56.94	38.85	9.42	10.09	10.27	11.63	11.95	6.20
28	E3_Aa	NovelBoundary	1	7.41	43.87	24.54	18.88	53.99	31.18	11.66	35.49	53.59	42.90	64.75	114.49	116.55	134.85	35.60	109.71	47.41	10.78	13.37	15.15	36.94	16.29	19.72
29	ER3a	ExonRegion	1	9.04	36.63	17.37	17.97	32.42	16.13	9.40	11.90	32.89	22.27	34.88	102.69	94.88	118.07	32.21	50.31	53.91	11.56	9.13	10.18	25.50	10.45	10.84
30	E3_Da	NovelBoundary	0	21.93	28.88	35.75	22.41	78.27	29.76	30.83	47.52	45.63	26.89	35.32	154.85	137.98	154.75	71.95	99.89	91.26	4.52	9.60	12.40	8.71	19.53	15.71
31	E3a_E5a	KnownJunction	0	0.00	0.00	3.10	4.26	4.07	2.90	3.89	4.44	9.95	4.51	0.00	18.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.69	3.15	3.12	3.16
32	I3	Intron	0	15.50	30.53	12.71	21.12	43.80	19.40	14.49	18.16	35.12	16.53	30.24	69.29	68.62	94.94	43.46	61.29	49.25	10.88	10.08	5.00	28.68	13.00	7.97
33	I3_AR1	ActiveIntronRegion	0	15.55	30.64	12.76	21.19	43.95	19.47	14.54	18.23	35.24	16.59	30.35	69.54	68.87	95.27	43.61	61.50	49.42	10.92	10.12	5.02	28.78	13.05	7.99
34	E4_Aa	NovelBoundary	0	3.04	27.56	34.59	24.01	93.97	63.32	28.31	16.88	42.51	25.36	31.06	112.24	106.16	87.59	43.76	73.14	44.23	18.36	7.44	14.45	20.20	12.43	15.37
35	ER4a	ExonRegion	0	20.59	20.39	11.50	11.29	36.08	13.75	11.46	2.55	19.12	7.77	24.51	80.27	66.74	60.61	46.61	37.27	25.51	4.26	11.59	3.56	12.36	4.78	3.37
36	E4_Da	NovelBoundary	0	17.26	54.07	15.08	34.83	74.02	41.06	35.95	18.77	55.18	21.76	36.17	102.03	63.31	74.28	28.56	59.04	60.31	2.57	8.85	8.88	11.68	8.57	16.22
37	E4a_E5a	KnownJunction	0	3.56	0.00	0.00	1.90	12.22	0.00	1.90	2.22	4.43	3.33	13.37	12.60	25.16	19.37	14.09	0.00	4.77	0.00	4.33	0.00	14.39	3.12	3.76
38	I4	Intron	0	5.62	24.04	10.65	16.19	29.46	17.54	13.19	13.31	25.42	10.90	26.70	47.12	27.52	65.13	21.64	42.18	38.94	10.13	8.46	6.78	14.63	10.24	3.90
39	I4_AR1	ActiveIntronRegion	1	5.64	24.10	10.68	16.23	29.54	17.58	13.22	13.34	25.49	10.92	26.77	47.24	27.59	65.29	21.69	42.29	39.04	10.16	8.48	6.80	14.67	10.27	3.91
40	E5_Aa	NovelBoundary	0	14.45	22.69	10.61	16.85	11.46	15.96	5.96	13.35	22.74	11.01	13.95	38.71	20.45	80.41	33.38	28.88	21.04	13.10	13.37	2.43	19.95	5.57	4.27
41	ER5a	ExonRegion	0	7.48	19.56	18.69	24.12	33.31	23.69	9.58	21.20	33.90	20.22	56.05	80.67	46.27	96.85	56.82	56.27	51.60	5.94	7.33	9.93	41.91	20.24	7.10
42	E5_Da	NovelBoundary	0	0.00	12.76	3.64	4.73	8.49	0.00	3.36	11.34	8.54	1.40	0.00	0.00	6.82	9.06	14.71	18.37	4.49	4.44	4.80	0.00	5.87	11.76	0.00
43	E5a_E6a	KnownJunction	0	19.56	19.54	21.20	38.59	44.06	28.51	12.23	37.95	59.84	31.00	90.65	38.71	58.60	156.51	70.21	69.55	55.73	10.90	24.38	19.94	40.28	19.59	20.66
44	I5_AR1	ActiveIntronRegion	0	5.68	13.89	15.30	14.54	18.72	3.28	9.80	10.27	17.37	10.01	9.90	19.51	21.00	18.38	14.69	11.36	16.92	5.76	6.74	4.15	2.15	5.08	0.96
45	I5_SR1	SilentIntronRegion	0	0.00	8.13	7.35	0.00	21.41	0.00	10.59	3.46	4.94	4.59	9.66	5.77	3.13	15.70	9.67	1.98	1.10	3.70	12.74	0.00	8.08	0.00	0.00
46	I5_AR3	ActiveIntronRegion	0	0.00	7.70	6.08	4.14	15.77	4.00	10.45	4.63	4.50	4.22	9.11	5.72	10.55	20.53	18.75	9.66	4.83	4.29	6.37	0.38	4.41	2.31	2.20
47	I5_SR2	SilentIntronRegion	0	4.23	11.56	9.15	6.64	21.69	6.22	7.49	12.62	11.56	6.99	5.83	12.31	12.38	18.25	13.51	12.23	11.98	4.16	4.64	4.16	2.88	3.24	1.84
48	E6_Aa	NovelBoundary	0	3.78	14.54	8.75	6.49	15.53	8.69	10.78	3.12	23.73	15.45	5.37	0.00	0.00	27.72	19.66	26.75	20.38	9.08	12.80	5.82	5.81	2.88	0.00
49	ER6a	ExonRegion	0	27.74	49.22	30.25	34.28	68.04	35.86	19.52	48.49	65.42	39.47	65.40	77.46	52.10	171.64	98.35	121.89	102.39	27.36	20.78	19.50	59.62	14.69	11.36
50	E6_Da	KnownBoundary	0	32.82	50.52	38.02	43.35	113.50	27.03	13.69	45.06	64.64	39.70	62.49	92.58	89.12	138.33	119.29	147.14	136.23	25.45	15.62	17.19	43.92	12.25	11.35
51	ER6b	ExonRegion	0	31.66	60.84	36.21	51.93	106.55	50.79	23.37	61.61	97.98	45.55	76.76	117.10	79.13	183.59	128.51	163.98	106.29	35.29	26.48	22.46	49.86	28.37	16.99
52	E6_Db	KnownBoundary	0	19.04	48.61	29.83	40.65	101.61	21.86	21.95	65.14	97.97	52.35	85.92	151.25	146.58	193.71	116.94	154.57	95.84	23.75	17.13	21.28	59.43	20.27	10.93
53	ER6c	ExonRegion	0	38.67	75.39	42.00	57.74	123.74	55.88	28.15	86.61	92.34	52.48	77.82	112.90	109.81	199.91	96.49	148.69	120.42	20.86	33.86	13.81	47.43	30.12	8.91
54	E6_Dc	KnownBoundary	0	60.08	88.80	79.24	80.21	85.14	48.67	36.74	95.91	97.74	79.16	54.28	160.70	145.77	134.50	105.69	96.56	92.38	30.01	47.44	15.40	35.27	33.19	0.00
55	ER6d	ExonRegion	0	51.37	104.08	59.88	79.02	136.73	40.77	34.88	73.76	83.28	49.58	58.55	141.27	105.26	117.84	114.83	83.56	69.55	17.18	21.93	23.42	30.46	24.58	13.37
56	IG14_AR1	ActiveIntergenicRegion	0	8.24	6.98	2.40	4.73	13.57	5.39	16.83	6.60	6.35	7.43	4.63	14.80	8.02	4.48	7.31	6.53	4.49	4.30	7.59	12.25	0.00	1.18	2.43
57	IG14_AR2	ActiveIntergenicRegion	0	4.28	5.57	1.94	0.18	9.37	13.20	19.17	0.11	1.64	1.02	1.72	0.00	0.00	3.25	8.14	7.95	1.51	2.25	0.28	2.87	0.00	3.26	0.00