Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF189 Gene 0 73.89 117.28 70.77 58.48 103.25 93.64 83.57 72.55 78.71 118.27 51.16 99.87 63.13 54.20 60.57 54.73 62.53 44.90 39.63 78.86 27.89 60.67 32.38 2 374861 Transcript 0 0.92 15.88 6.29 2.73 5.49 21.15 11.72 11.29 9.49 13.70 9.04 0.71 1.82 12.68 10.46 22.85 13.64 32.46 16.86 26.50 13.34 13.34 9.79 3 259395 Transcript 0 5.75 3.15 1.89 5.49 7.45 13.47 4.80 2.49 4.03 13.55 8.04 15.02 3.47 15.72 5.01 17.56 13.95 8.21 5.98 6.30 12.34 5.54 5.62 4 339664 Transcript 0 2.34 0.99 5.60 4.80 3.45 14.27 3.09 4.45 6.09 12.03 5.30 1.16 2.84 3.20 5.09 3.83 11.54 21.79 0.33 21.52 2.22 4.22 6.30 5 ER1a ExonRegion 0 1.85 13.22 2.56 1.33 7.75 26.91 10.37 3.68 5.94 9.87 8.18 1.42 3.64 10.35 6.83 25.28 14.66 17.99 16.11 15.55 12.66 7.93 11.82 6 E1_Ab KnownBoundary 0 11.71 14.34 7.69 1.76 0.00 40.54 33.30 16.02 15.68 31.35 11.27 0.00 12.82 12.24 10.75 15.21 22.63 43.03 10.45 27.55 21.31 7.84 3.59 7 ER1b ExonRegion 1 6.70 10.08 9.35 4.91 5.78 16.75 10.98 11.27 17.21 30.67 19.97 4.52 0.79 32.89 8.99 34.19 30.47 46.49 26.18 34.66 26.66 19.52 21.14 8 E1a_E2a KnownJunction 0 0.00 3.09 1.51 6.13 17.15 13.46 4.50 1.85 2.72 11.71 10.27 6.90 6.82 25.66 0.00 28.37 8.98 10.69 13.46 9.72 18.84 5.88 8.71 9 E1a_E3a KnownJunction 0 3.56 0.00 6.30 3.80 3.74 20.05 1.68 2.22 3.41 7.60 2.68 0.00 0.00 2.24 4.45 3.16 8.88 28.02 0.00 18.79 2.59 5.63 8.71 10 E1a_E3b KnownJunction 0 0.00 18.55 10.02 4.13 3.23 15.39 13.07 18.89 13.05 17.54 9.90 0.00 0.00 15.01 14.09 20.42 12.62 46.93 17.60 37.46 14.02 18.74 7.77 11 ER2a ExonRegion 0 4.79 3.39 0.68 1.81 5.21 12.97 5.96 1.51 4.57 15.84 7.06 9.20 3.59 14.31 6.12 20.65 24.17 10.19 4.47 6.12 11.70 8.23 3.80 12 E2a_E3b KnownJunction 0 12.45 2.96 3.49 8.52 0.00 13.97 3.93 4.11 4.80 13.11 6.79 28.96 0.00 7.18 8.90 3.67 8.70 3.73 0.00 3.07 6.49 2.51 4.35 13 ER3a ExonRegion 0 1.13 1.99 4.90 5.80 3.17 8.49 4.50 6.67 8.76 16.46 7.91 2.32 5.67 4.15 5.74 4.49 14.20 15.56 0.67 24.25 1.84 2.81 3.89 14 E3_Ab KnownBoundary 0 3.41 5.92 8.99 13.72 4.07 0.00 8.30 6.90 10.82 24.74 12.00 6.30 15.10 4.71 4.45 3.25 16.46 9.29 0.00 30.55 2.59 2.69 0.00 15 ER3b ExonRegion 1 16.13 60.16 20.82 20.12 29.94 41.46 35.65 29.05 34.35 62.63 32.47 34.69 23.45 44.88 17.03 34.36 51.79 42.74 22.98 61.40 19.60 44.99 18.35 16 E3_Da NovelBoundary 0 6.89 22.69 1.83 14.42 15.62 0.00 7.68 12.49 24.33 19.29 15.58 18.61 53.57 15.13 10.75 18.97 7.57 29.02 26.64 22.24 8.22 23.82 6.83 17 E3a_E4a KnownJunction 0 23.93 51.70 20.82 19.01 64.52 101.99 58.43 23.54 29.63 54.64 36.27 13.65 32.63 39.26 10.51 15.47 34.78 33.37 29.93 45.96 17.73 34.35 17.07 18 I3 Intron 0 12.44 14.94 10.35 13.60 15.97 13.80 18.19 10.90 23.61 23.47 11.80 38.35 35.27 16.42 11.27 11.57 19.08 9.56 6.08 26.86 6.03 9.81 7.30 19 I3_AR1 ActiveIntronRegion 0 3.62 5.79 3.12 10.42 6.10 6.27 9.43 13.21 17.83 14.62 15.42 39.40 40.25 21.86 12.59 20.32 23.49 19.62 16.32 24.24 7.52 20.78 12.55 20 I3_SR1 SilentIntronRegion 0 7.83 9.87 9.09 10.25 11.39 10.40 15.65 9.70 21.86 23.07 13.21 39.66 43.55 15.76 12.26 13.09 24.81 10.69 8.07 31.85 7.71 9.10 8.70 21 I3_AR2 ActiveIntronRegion 0 4.27 24.63 8.36 11.11 13.03 12.86 20.89 6.53 17.17 11.94 6.61 36.56 32.36 16.07 5.28 7.28 8.31 5.06 2.19 17.88 3.32 8.12 6.51 22 I3_AR3 ActiveIntronRegion 0 28.97 15.63 16.78 20.76 22.07 9.63 20.73 12.32 22.26 22.27 13.05 29.96 33.82 14.99 10.32 10.31 17.64 6.99 3.28 31.12 5.58 7.23 6.06 23 I3_AR4 ActiveIntronRegion 0 14.65 18.89 10.75 15.71 20.90 20.56 20.48 12.68 28.75 28.85 10.73 40.59 26.68 17.15 12.06 10.45 15.64 9.26 4.72 22.44 4.89 10.72 5.76 24 E4_Aa NovelBoundary 0 25.34 52.16 17.53 13.25 4.33 12.66 10.60 13.51 26.85 15.07 19.37 13.95 0.00 26.49 4.45 0.00 0.00 2.49 9.60 21.92 6.12 3.12 8.71 25 ER4a ExonRegion 0 88.32 138.78 84.34 69.73 123.16 108.94 98.61 86.00 92.64 138.03 58.91 119.16 75.29 61.02 71.59 60.74 70.15 48.60 44.64 90.10 30.30 70.11 36.52 26 IG30_SR1 SilentIntergenicRegion 0 3.61 5.19 8.88 5.64 9.14 1.44 0.96 5.45 5.09 3.92 2.38 18.45 0.43 1.42 2.86 0.55 6.20 3.72 3.92 11.85 0.00 10.51 5.01 27 IG30_AR1 ActiveIntergenicRegion 0 10.29 7.80 3.08 4.23 20.60 2.83 12.52 10.32 3.09 3.20 2.96 1.05 0.00 2.90 15.34 5.40 3.65 4.51 5.21 7.51 0.90 7.04 0.40 28 IG30_AR2 ActiveIntergenicRegion 0 8.43 13.62 9.23 8.81 20.63 6.39 13.13 14.01 6.69 5.73 1.13 10.95 3.16 3.48 10.10 4.60 7.11 4.79 1.05 9.69 0.65 4.79 2.29 29 IG30_AR3 ActiveIntergenicRegion 0 12.03 8.78 5.15 7.49 12.45 2.63 7.85 7.08 3.10 3.00 0.38 1.11 1.54 1.84 1.03 0.30 0.66 0.76 0.95 4.35 0.00 1.45 0.79