Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	KLF4	Gene	0	63.46	0.71	43.31	2.29	12.60	1.63	3.89	45.92	105.59	0.98	0.00	0.70	0.32	0.23	0.52	0.00	0.23	1.07	0.40	0.09	279.79	101.50	38.81
2	420475	Transcript	0	0.15	0.00	0.26	0.00	0.00	0.00	0.00	0.00	0.13	0.12	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.08	0.15	0.21
3	439281	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	316479	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	374670	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	374672	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	493306	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	411706	Transcript	0	0.08	0.00	1.09	0.02	0.00	0.00	0.02	5.48	9.71	0.00	0.00	0.00	0.00	0.02	0.00	0.00	0.00	0.05	0.00	0.00	29.00	4.86	1.52
9	497048	Transcript	0	4.15	0.01	23.51	0.00	0.24	0.00	0.00	11.10	37.73	0.01	0.00	0.02	0.00	0.00	0.58	0.00	0.00	0.00	0.00	0.01	94.44	10.41	9.31
10	ER1a	ExonRegion	0	0.30	0.00	0.51	0.00	0.00	0.00	0.00	0.00	0.26	0.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.17	0.29	0.41
11	E1a_E2d	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER2b	ExonRegion	0	0.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.86	0.00	0.00
14	E2_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	E2_Da	KnownBoundary	0	3.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.31	0.00	3.59
16	E2a_E2e	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER2c	ExonRegion	0	2.12	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.81	0.00	2.94
18	ER2d	ExonRegion	0	1.85	0.00	0.48	0.00	0.00	0.00	0.00	0.31	4.51	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	42.15	6.68	1.63
19	E2_Ad	KnownBoundary	0	3.41	0.00	1.60	0.00	0.00	0.00	0.00	1.77	12.88	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	80.43	17.33	4.27
20	ER2e	ExonRegion	0	2.75	0.00	1.77	0.00	0.00	0.00	0.87	5.35	17.79	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	116.68	18.88	3.31
21	E2_Ae	KnownBoundary	0	2.89	0.00	3.67	0.00	0.00	0.00	4.50	11.67	21.99	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	196.02	22.84	12.38
22	E2_Af	KnownBoundary	0	10.08	0.00	8.75	0.00	4.33	0.00	0.00	7.56	36.60	0.00	0.00	0.00	6.17	0.00	0.00	0.00	0.00	2.16	0.00	0.00	192.81	58.48	11.87
23	ER2f	ExonRegion	0	4.56	0.00	6.43	0.00	0.00	0.00	1.65	9.78	32.69	0.00	0.00	0.00	1.17	0.00	0.00	0.00	0.00	1.62	0.00	0.00	202.95	42.97	8.44
24	ER2g	ExonRegion	0	11.85	0.39	21.07	1.12	3.04	1.04	0.64	38.08	103.85	0.65	0.00	2.70	1.33	0.32	0.00	0.00	0.00	1.53	0.60	0.00	420.79	100.37	51.53
25	E2b_E3b	KnownJunction	0	10.30	0.00	25.04	2.80	0.00	0.00	1.99	36.76	92.22	1.24	0.00	0.00	0.00	2.47	0.00	0.00	0.00	1.95	0.00	0.00	484.71	65.83	46.69
26	ER3a	ExonRegion	0	0.08	0.00	1.09	0.02	0.00	0.00	0.02	5.48	9.71	0.00	0.00	0.00	0.00	0.02	0.00	0.00	0.00	0.05	0.00	0.00	29.00	4.86	1.52
27	E3_Ab	KnownBoundary	0	3.04	0.00	1.69	0.00	0.00	0.00	0.00	9.41	23.21	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.95	0.00	0.00	64.31	5.69	8.71
28	ER3b	ExonRegion	0	4.34	0.00	26.26	0.13	5.92	0.57	0.46	40.63	90.61	0.00	0.00	0.00	0.00	0.80	0.00	0.00	0.00	3.54	0.00	0.00	432.61	90.86	47.56
29	E3_Da	KnownBoundary	0	7.33	0.00	23.80	0.00	4.16	2.84	0.00	40.50	76.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	353.37	87.87	65.30
30	ER3c	ExonRegion	0	12.24	0.71	18.35	0.00	1.05	1.28	0.00	35.66	72.20	0.42	0.00	3.01	0.00	0.00	0.00	0.00	0.00	0.40	0.00	0.74	345.98	116.99	62.95
31	E3_Db	NovelBoundary	0	21.63	0.00	15.82	0.00	0.00	0.00	0.00	13.51	46.79	0.00	0.00	6.15	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	234.63	59.27	28.77
32	E3c_E4b	KnownJunction	0	9.11	3.35	16.56	0.00	0.00	0.00	0.00	41.48	78.38	1.64	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.53	0.00	3.13	392.97	143.47	54.55
33	ER3d	ExonRegion	0	10.75	2.03	13.86	0.00	0.00	0.00	0.00	32.31	75.72	1.15	0.00	4.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.13	351.24	114.59	57.60
34	I3	Intron	0	7.17	0.00	15.65	0.00	1.13	0.39	0.84	5.72	24.93	0.18	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.58	0.00	0.00	70.17	5.95	9.63
35	I3_SR1	SilentIntronRegion	0	7.68	0.00	16.65	0.00	1.08	0.43	0.88	6.14	26.72	0.20	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.61	0.00	0.00	74.34	6.23	10.31
36	E4_Aa	NovelBoundary	0	20.74	0.00	40.12	0.00	8.66	0.00	0.00	15.77	58.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.66	0.00	0.00	149.07	10.72	7.34
37	ER4a	ExonRegion	0	4.15	0.01	23.51	0.00	0.24	0.00	0.00	11.10	37.73	0.01	0.00	0.02	0.00	0.00	0.58	0.00	0.00	0.00	0.00	0.01	94.44	10.41	9.31
38	E4_Ab	KnownBoundary	0	19.11	0.00	25.22	0.00	3.48	0.00	0.00	24.93	66.46	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	120.03	11.63	3.41
39	ER4b	ExonRegion	0	17.94	0.58	31.35	0.98	3.34	0.78	1.40	33.77	85.12	1.84	0.00	0.58	0.00	0.00	0.87	0.00	0.28	1.49	1.09	0.26	432.19	63.55	40.16
40	E4_Da	KnownBoundary	0	39.19	0.00	85.80	6.79	0.00	0.00	6.32	54.75	130.55	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	440.60	116.89	28.51
41	ER4c	ExonRegion	0	32.66	0.84	47.27	1.63	4.99	2.55	1.92	33.99	106.94	0.70	0.00	0.29	0.00	0.16	1.37	0.00	0.00	0.85	1.30	0.00	483.93	104.23	53.55
42	E4_Db	KnownBoundary	0	6.82	0.00	3.02	1.66	3.74	0.00	0.00	9.82	29.46	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	102.12	7.47	0.00
43	E4b_E4c	KnownJunction	0	74.98	0.00	45.21	2.80	3.40	2.38	0.00	42.39	137.73	0.00	0.00	5.70	0.00	0.00	0.00	0.00	0.00	4.35	0.00	0.00	508.74	109.30	59.07
44	ER4d	ExonRegion	0	14.73	0.00	7.57	0.78	1.74	0.87	0.00	10.12	28.41	0.00	0.00	0.04	0.00	0.00	0.03	0.00	0.00	1.74	0.00	0.00	118.42	13.13	8.10
45	E4_Ac	KnownBoundary	0	19.71	0.00	10.76	0.00	4.33	0.00	0.00	9.49	29.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.94	0.00	0.00	125.41	12.86	8.11
46	ER4e	ExonRegion	0	66.67	0.63	57.76	3.27	13.23	4.46	3.83	59.96	168.49	0.05	0.00	1.53	1.03	1.19	0.16	0.00	1.03	3.52	0.00	0.00	550.74	112.95	79.49
47	E4_Dc	NovelBoundary	0	31.12	5.13	4.97	1.96	0.00	0.00	0.00	5.05	14.67	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	69.99	3.06	0.00
48	E4c_E5a	KnownJunction	0	94.68	0.00	84.21	5.16	28.35	0.00	4.15	77.71	197.51	1.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.52	0.00	0.00	615.92	242.61	125.65
49	I4	Intron	0	38.05	0.23	2.27	1.26	15.73	0.21	1.95	6.55	21.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.10	0.00	0.00	33.51	7.30	4.81
50	I4_AR1	ActiveIntronRegion	0	38.14	0.23	2.28	1.26	15.77	0.21	1.95	6.57	21.38	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.10	0.00	0.00	33.59	7.32	4.82
51	E5_Aa	NovelBoundary	0	62.46	0.00	1.57	0.00	23.51	0.00	0.00	13.14	28.44	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	41.39	8.45	16.05
52	ER5a	ExonRegion	0	178.39	1.55	91.97	5.84	36.01	3.14	10.93	99.07	201.94	1.78	0.00	0.85	0.55	0.44	0.68	0.00	0.47	1.18	0.15	0.10	262.18	213.81	56.96
53	ER5b	ExonRegion	0	2.12	0.00	2.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00