Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HDHD3 Gene 0 69.18 27.15 50.97 30.70 25.54 36.88 16.10 36.19 30.41 48.28 58.35 18.71 7.45 75.84 111.71 64.09 27.19 29.26 41.67 20.31 23.91 17.47 29.95 2 374180 Transcript 0 18.62 11.83 19.94 5.04 13.52 33.36 8.79 15.22 5.15 16.97 20.77 0.00 0.00 38.84 26.12 31.27 11.37 12.86 29.18 8.66 12.89 5.52 25.07 3 485934 Transcript 0 0.00 0.00 16.14 12.92 0.00 2.38 0.00 2.55 6.16 14.40 17.21 0.00 6.82 23.72 41.91 14.87 11.50 12.02 3.95 3.26 13.04 11.21 24.50 4 238379 Transcript 0 53.41 22.66 25.70 19.28 22.59 15.94 11.92 23.35 17.48 25.80 26.00 17.84 6.05 35.65 39.58 40.14 16.15 11.29 29.20 12.36 7.02 8.43 10.92 5 ER1a ExonRegion 0 29.69 11.36 17.65 1.58 23.72 56.38 17.58 5.30 3.74 8.44 10.00 0.00 0.00 19.06 21.47 24.77 4.80 8.43 23.06 4.74 12.14 2.53 17.70 6 E1_Ab KnownBoundary 1 60.16 29.34 50.47 9.29 52.97 141.06 35.20 18.77 13.05 24.01 11.95 6.15 0.00 65.28 11.37 69.21 3.83 26.32 17.51 9.72 21.00 11.82 28.60 7 ER1b ExonRegion 0 15.01 9.72 26.08 7.76 10.44 31.87 8.12 12.84 11.14 25.95 32.50 3.45 0.72 50.91 45.09 44.55 13.52 19.67 32.55 9.85 20.74 10.08 26.92 8 E1_Da NovelBoundary 1 9.78 0.00 22.62 3.23 0.00 0.00 1.72 9.41 5.38 16.39 4.69 6.30 0.00 60.10 24.48 118.86 8.98 25.37 35.39 8.69 0.00 5.82 47.89 9 E1a_E2b KnownJunction 0 7.56 12.30 22.23 8.49 3.31 10.33 0.00 25.14 6.57 25.49 31.53 0.00 0.00 58.63 30.78 37.77 17.95 17.29 35.30 12.59 13.65 8.51 32.44 10 E1a_E2c KnownJunction 0 0.00 0.00 16.14 12.92 0.00 2.38 0.00 2.55 6.16 14.40 17.21 0.00 6.82 23.72 41.91 14.87 11.50 12.02 3.95 3.26 13.04 11.21 24.50 11 I1 Intron 0 0.00 0.00 0.00 0.00 6.30 0.00 4.16 0.00 0.00 0.00 1.52 0.00 0.00 11.99 8.03 13.99 5.18 0.00 10.00 1.67 1.73 0.00 4.61 12 I1_AR1 ActiveIntronRegion 0 0.00 0.00 0.00 0.00 6.60 0.00 4.36 0.00 0.00 0.00 1.59 0.00 0.00 12.55 8.42 14.62 5.43 0.00 10.48 1.75 1.81 0.00 4.83 13 E2_Aa NovelBoundary 0 2645.21 2909.48 8708.59 9467.19 2852.72 1989.99 3332.25 10735.85 9777.88 9635.19 1206.46 609.95 553.21 294.90 928.86 2422.27 2418.14 11806.75 2197.99 3220.98 1624.25 1184.62 2610.92 14 ER2a ExonRegion 0 53.41 22.66 25.70 19.28 22.59 15.94 11.92 23.35 17.48 25.80 26.00 17.84 6.05 35.65 39.58 40.14 16.15 11.29 29.20 12.36 7.02 8.43 10.92 15 E2_Ab KnownBoundary 0 131.06 56.44 26.02 28.40 39.39 70.64 21.42 21.77 21.73 27.00 49.64 18.01 6.82 79.52 44.63 42.89 29.08 10.40 21.65 31.51 5.31 22.90 8.02 16 ER2b ExonRegion 0 157.50 92.11 49.07 39.12 83.54 93.39 40.91 52.32 43.26 55.39 118.80 52.27 7.66 124.90 97.09 73.65 43.88 36.95 58.27 42.03 31.28 27.03 38.03 17 E2_Ac KnownBoundary 0 139.88 82.55 57.77 37.72 106.20 67.40 51.63 53.27 46.90 51.84 78.86 80.73 14.61 89.59 83.57 59.73 29.73 39.84 8.19 38.93 36.26 21.25 18.61 18 ER2c ExonRegion 0 74.74 37.97 67.56 41.80 56.15 42.35 28.64 50.69 54.24 73.90 90.69 21.94 19.27 79.25 120.58 51.54 28.35 36.37 36.87 28.88 29.98 22.52 38.22 19 E2_Da NovelBoundary 0 25.41 2.63 4.94 8.52 3.82 4.71 0.00 10.97 2.49 4.08 9.48 6.60 0.00 12.36 13.35 0.00 0.00 1.82 8.85 0.00 2.72 8.94 3.84 20 E2a_E3a KnownJunction 0 65.72 17.56 83.62 48.55 58.66 86.77 34.71 51.88 62.67 89.53 79.60 5.40 18.34 82.11 143.64 56.99 28.80 38.55 35.58 29.79 26.38 23.88 51.22 21 ER3a ExonRegion 0 94.33 33.44 80.19 44.90 27.68 51.43 22.31 52.68 44.91 66.94 85.92 21.67 10.04 110.61 178.07 76.83 33.68 44.98 45.39 30.38 37.05 20.72 36.77 22 E3_Da KnownBoundary 0 138.77 18.02 108.28 68.62 36.16 38.95 26.14 84.74 46.70 72.34 67.49 12.60 6.82 136.03 231.29 206.19 47.41 58.24 86.03 31.38 40.22 35.21 74.01 23 ER3b ExonRegion 0 75.58 26.80 57.10 37.88 23.21 37.34 12.02 41.34 34.84 63.03 70.83 21.74 7.86 95.13 156.71 93.33 40.30 36.64 58.88 20.48 29.49 28.61 46.57