Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	FBXW2	Gene	0	43.87	44.45	42.61	31.85	55.93	45.72	64.14	72.07	89.95	107.05	134.23	82.45	108.15	156.38	96.26	131.97	116.87	91.38	60.87	84.27	91.60	89.04	77.01
2	373926	Transcript	0	1.37	4.31	0.18	0.00	4.36	7.96	6.76	3.06	3.51	6.01	11.85	2.16	4.69	14.70	15.24	15.82	7.95	1.42	9.68	4.42	9.56	8.05	9.82
3	453291	Transcript	0	0.00	0.00	0.00	2.06	11.80	2.50	0.00	12.36	13.63	16.22	27.59	13.20	7.63	12.83	9.15	12.05	32.54	9.70	0.00	22.88	26.26	8.45	0.00
4	476481	Transcript	0	1.05	1.98	1.09	1.40	1.43	2.50	6.93	5.24	9.41	5.87	10.16	3.12	10.18	14.72	10.21	23.55	22.27	12.75	9.87	15.40	8.97	10.40	13.42
5	444833	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	340778	Transcript	0	0.00	2.63	3.10	2.06	7.13	0.00	0.00	0.00	4.92	0.00	5.05	0.00	0.00	0.00	4.45	0.00	4.49	1.95	0.00	3.26	6.30	0.00	0.00
7	474117	Transcript	0	5.54	3.31	0.51	0.11	0.14	3.03	6.02	1.21	4.09	7.30	5.71	1.14	1.02	8.79	3.44	6.63	7.15	1.04	8.57	3.79	1.58	4.37	3.41
8	493559	Transcript	0	14.58	15.77	4.87	6.85	17.71	9.59	17.06	16.80	15.21	14.95	8.26	23.16	20.29	11.72	8.74	15.04	10.08	5.34	3.71	13.25	3.63	13.85	7.64
9	IG11_SR1	SilentIntergenicRegion	0	1.38	0.00	0.00	0.00	1.75	0.00	0.87	0.00	0.00	0.00	2.53	0.00	0.00	4.25	6.70	17.03	10.79	0.00	4.17	1.39	3.93	0.00	3.84
10	ER1a	ExonRegion	0	2.73	5.90	0.36	0.00	3.37	15.91	11.74	1.51	0.84	1.70	14.03	0.00	0.00	24.00	25.64	19.75	11.50	1.61	11.92	5.28	16.92	8.47	12.79
11	E1_Ae	NovelBoundary	0	8.67	22.50	2.28	0.00	14.60	40.49	45.75	3.53	4.66	3.28	35.75	0.00	0.00	39.14	49.45	37.68	26.55	18.07	26.64	13.04	46.52	21.13	37.82
12	E1b_E1f	KnownJunction	1	34.38	48.61	5.41	1.63	58.23	29.76	37.10	16.68	16.78	36.85	101.50	0.00	0.00	90.12	58.47	121.51	107.15	94.51	49.60	28.44	80.62	54.31	87.33
13	ER1b	ExonRegion	1	10.58	20.34	2.45	0.00	8.03	28.42	25.16	5.19	1.24	6.88	40.59	0.00	0.00	64.15	71.08	47.55	36.31	9.24	22.30	10.64	39.67	20.84	29.37
14	ER1c	ExonRegion	1	13.40	24.40	2.45	0.45	8.92	33.01	28.69	5.19	2.88	7.65	47.68	0.00	0.00	76.87	78.33	49.54	42.91	11.09	25.48	12.06	44.81	25.70	31.32
15	ER1d	ExonRegion	1	20.53	26.44	2.82	2.04	19.27	37.41	33.36	5.88	5.19	10.67	70.55	0.00	0.00	97.45	84.43	62.71	55.79	14.97	49.05	16.17	66.77	45.84	51.10
16	ER1e	ExonRegion	1	23.28	27.31	4.20	2.73	24.08	37.99	37.07	6.91	9.18	13.44	86.43	0.00	0.00	99.77	79.16	75.58	68.38	16.63	56.88	19.76	79.33	59.83	58.73
17	ER1f	ExonRegion	1	20.81	25.76	2.45	2.27	25.42	26.90	39.28	5.19	9.88	16.06	82.47	0.00	0.00	74.17	62.86	69.84	70.97	17.25	43.53	18.44	71.62	43.41	56.78
18	ER1g	ExonRegion	0	9.49	3.56	0.10	0.22	0.28	6.07	11.04	2.42	5.72	11.74	9.01	2.28	2.03	11.89	3.26	13.27	9.36	2.08	17.14	7.59	3.16	7.17	6.81
19	E1_Af	KnownBoundary	0	7.04	0.00	0.00	1.43	0.00	0.00	6.67	3.41	3.94	8.76	0.00	0.00	0.00	5.18	0.00	0.00	0.00	3.61	0.00	3.13	0.00	2.57	0.00
20	ER1h	ExonRegion	1	13.89	13.20	6.69	3.91	13.78	7.56	11.49	15.97	25.55	37.89	52.28	5.69	5.78	44.75	17.81	27.79	47.16	12.73	16.61	19.80	41.54	26.99	24.69
21	E1_Dc	KnownBoundary	0	0.00	0.00	0.00	0.00	4.33	0.00	3.80	2.55	6.37	3.63	8.63	6.30	0.00	7.30	4.45	4.36	17.95	7.17	3.95	14.32	2.90	3.00	0.00
22	E1c_E2a	KnownJunction	1	7.04	6.45	3.58	2.90	3.99	4.83	0.00	12.40	29.69	48.03	82.71	0.00	6.82	57.86	15.82	24.35	73.96	16.04	9.60	22.12	76.67	13.72	19.72
23	E1c_E2b	KnownJunction	0	0.00	0.00	0.00	2.06	11.80	2.50	0.00	12.36	13.63	16.22	27.59	13.20	7.63	12.83	9.15	12.05	32.54	9.70	0.00	22.88	26.26	8.45	0.00
24	ER1i	ExonRegion	0	2.10	3.96	2.17	0.94	2.86	5.00	12.04	10.49	15.60	10.07	18.16	6.25	13.53	20.26	10.77	27.01	33.51	25.50	15.60	30.80	15.54	14.99	26.83
25	E1_Dd	NovelBoundary	0	14.45	6.05	2.96	1.90	0.00	0.00	7.77	8.75	25.32	12.25	22.11	29.71	6.17	17.13	22.37	35.38	46.10	24.54	20.24	51.71	13.28	0.00	31.33
26	E1d_E2a	KnownJunction	0	0.00	0.00	0.00	1.86	0.00	0.00	1.81	0.00	3.21	1.67	2.16	0.00	6.82	9.18	9.64	20.08	11.03	0.00	4.14	0.00	2.41	5.82	0.00
27	I1	Intron	0	9.03	7.76	6.75	5.30	8.86	4.82	23.22	14.39	17.28	11.70	12.94	35.71	38.84	17.20	7.40	22.43	20.09	6.71	11.25	22.40	8.18	15.58	17.84
28	I1_SR1	SilentIntronRegion	0	5.71	4.28	4.03	3.64	5.42	5.68	22.61	12.03	8.79	5.87	10.19	42.12	47.62	16.95	4.16	20.22	17.35	7.86	9.54	21.53	6.55	10.18	20.19
29	I1_AR2	ActiveIntronRegion	0	6.19	4.62	6.23	3.57	8.14	5.19	17.62	9.55	21.21	11.66	15.00	25.60	25.00	21.92	7.24	25.36	28.77	10.11	16.56	23.70	8.89	12.75	28.14
30	I1_SR2	SilentIntronRegion	0	7.16	6.57	5.89	4.63	8.43	4.49	22.68	12.12	14.33	10.09	11.23	29.88	31.55	14.08	7.17	17.14	16.72	3.76	8.41	19.61	4.67	13.90	13.04
31	I1_AR3	ActiveIntronRegion	0	14.51	9.66	9.66	8.23	11.76	5.15	26.34	20.84	24.77	17.42	18.56	44.02	40.23	22.03	8.55	34.81	25.83	10.59	14.52	25.15	16.62	20.93	23.94
32	I1_SR3	SilentIntronRegion	1	15.63	22.54	10.52	7.09	12.31	3.95	30.17	22.49	27.03	17.90	10.28	51.91	86.05	17.08	13.08	17.68	18.78	6.32	16.26	33.20	6.06	26.80	11.03
33	E2_Aa	NovelBoundary	1	21.63	14.21	24.81	8.82	10.95	17.38	29.50	57.75	36.49	27.21	11.74	69.92	120.28	28.90	14.46	39.05	24.12	14.67	28.52	9.01	14.52	35.58	32.69
34	ER2a	ExonRegion	0	28.45	51.67	27.12	14.00	25.64	15.60	55.25	50.18	80.15	112.84	215.78	77.14	112.01	201.60	112.52	156.02	172.07	84.62	82.89	91.60	128.57	106.04	114.56
35	E2_Ab	KnownBoundary	0	52.38	50.25	37.49	20.84	67.57	55.82	132.00	61.24	87.67	113.12	150.88	93.63	222.23	169.82	92.22	210.12	143.24	125.02	73.79	80.66	95.51	93.44	139.31
36	ER2b	ExonRegion	0	46.13	76.30	58.48	40.53	78.26	78.27	105.33	119.79	138.91	192.50	227.58	125.53	180.40	320.53	141.73	216.39	231.37	158.21	104.59	139.89	159.60	123.09	129.90
37	E2_Da	KnownBoundary	0	96.39	121.49	80.16	57.50	117.15	80.98	108.02	193.66	216.98	267.81	306.97	178.86	193.49	409.62	199.77	238.40	346.33	152.01	134.97	190.22	273.30	158.41	122.24
38	ER2c	ExonRegion	0	78.56	87.64	86.29	76.26	121.26	89.46	121.31	169.70	217.80	245.55	370.17	215.05	361.55	457.58	189.36	338.06	324.80	215.34	162.53	215.37	247.81	199.66	180.38
39	E2_Db	NovelBoundary	0	6.52	9.41	27.05	7.16	0.00	0.00	5.48	47.97	20.08	22.56	29.64	13.05	6.82	7.18	18.05	15.21	13.09	13.06	0.00	36.50	8.96	5.51	23.47
40	E2b_E3a	KnownJunction	0	76.61	68.08	64.46	57.20	90.41	47.98	94.51	160.52	211.17	271.84	337.35	356.37	324.17	431.87	207.18	334.87	241.42	253.57	95.72	129.50	199.05	245.91	220.92
41	E2b_E4b	KnownJunction	0	0.00	2.63	3.10	2.06	7.13	0.00	0.00	0.00	4.92	0.00	5.05	0.00	0.00	0.00	4.45	0.00	4.49	1.95	0.00	3.26	6.30	0.00	0.00
42	E2b_E5a	NovelJunction	0	0.00	6.31	0.00	2.00	3.48	5.39	3.75	1.56	9.03	8.60	2.00	7.65	6.33	0.00	4.45	0.00	3.46	1.95	0.00	2.94	5.99	7.90	0.00
43	I2	Intron	0	7.50	10.92	7.04	7.22	11.67	3.77	18.80	15.33	13.00	12.33	4.56	11.01	18.52	2.60	6.55	9.03	8.86	4.29	5.26	14.94	3.30	3.94	9.55
44	I2_SR2	SilentIntronRegion	0	6.18	12.28	5.80	7.62	11.77	4.20	20.13	17.30	13.26	12.01	4.05	10.37	18.05	2.60	6.09	10.89	8.96	3.91	5.72	15.70	3.63	4.26	10.43
45	I2_AR3	ActiveIntronRegion	0	12.40	11.23	9.52	8.55	15.58	5.44	30.86	17.51	24.86	27.25	9.67	14.40	25.85	3.21	9.53	10.11	16.11	8.56	6.03	23.67	6.80	5.47	13.68
46	E3_Aa	NovelBoundary	1	3.56	9.74	9.91	6.83	7.22	7.67	27.56	30.60	22.45	18.78	5.21	44.11	22.56	4.94	28.18	4.36	4.21	8.25	0.00	47.81	16.19	13.35	19.04
47	ER3a	ExonRegion	0	78.57	89.12	68.12	47.11	111.05	88.51	104.66	132.10	181.44	229.65	324.15	204.75	332.25	362.74	199.61	293.49	268.69	198.69	134.90	162.80	241.53	202.17	166.42
48	E3_Da	NovelBoundary	0	6.82	6.51	4.79	0.00	37.35	37.71	38.24	10.02	39.93	21.46	20.22	13.35	27.11	35.20	8.90	27.51	39.27	9.04	8.19	11.57	14.15	7.59	8.11
49	E3a_E4b	KnownJunction	0	35.34	45.98	63.89	37.16	71.14	133.56	117.69	88.68	136.40	153.38	151.72	178.86	214.11	340.75	216.95	181.58	159.33	100.52	77.27	136.27	172.24	156.27	162.96
50	I3	Intron	0	15.40	24.09	4.75	8.09	20.90	14.91	30.03	32.16	30.02	28.06	29.78	35.86	38.43	29.57	12.75	27.95	27.89	9.28	10.32	32.21	10.30	25.46	21.84
51	I3_AR1	ActiveIntronRegion	0	3.73	8.72	0.00	0.00	22.68	4.89	19.17	0.00	4.53	1.91	4.51	2.06	1.34	8.66	11.19	11.46	3.14	1.85	0.00	15.81	3.36	9.03	3.78
52	I3_AR2	ActiveIntronRegion	0	4.69	50.28	0.00	0.00	60.97	10.50	29.62	0.00	5.04	2.34	13.26	13.92	3.22	21.30	11.95	21.50	8.41	2.86	0.00	22.65	5.10	20.63	12.84
53	I3_AR3	ActiveIntronRegion	1	4.30	10.78	0.85	4.71	11.35	6.45	9.47	19.22	24.03	19.81	31.10	12.33	2.27	12.35	17.14	8.92	20.11	4.76	0.39	26.18	0.00	25.95	13.53
54	I3_SR1	SilentIntronRegion	0	16.81	23.44	5.32	8.94	18.82	15.78	31.18	35.49	32.47	30.65	31.43	39.03	42.98	31.33	12.69	29.54	30.05	10.05	11.62	33.50	11.21	26.19	23.21
55	E4_Aa	NovelBoundary	1	13.56	15.79	11.12	21.84	22.75	10.90	43.90	57.54	34.06	50.39	19.64	49.22	68.50	32.02	21.26	20.08	21.32	9.82	0.00	58.48	5.75	31.66	26.46
56	ER4a	ExonRegion	1	35.25	40.23	12.45	14.19	42.30	24.64	41.96	43.50	36.70	38.70	23.45	57.16	51.36	30.65	16.89	35.94	25.94	12.41	8.34	31.54	7.60	39.40	18.75
57	E4_Ab	KnownBoundary	1	68.38	53.87	23.74	15.05	56.20	58.55	50.39	45.88	51.39	48.22	37.01	79.53	48.37	44.79	32.51	68.53	11.50	20.48	22.02	45.64	17.85	47.15	66.84
58	ER4b	ExonRegion	0	125.19	115.46	109.70	80.01	130.13	124.28	159.25	172.68	205.76	252.85	301.81	252.70	248.47	386.15	208.24	318.06	251.29	202.04	143.75	189.47	225.59	218.25	197.20
59	E4a_E5a	KnownJunction	0	167.07	101.36	118.48	84.70	125.89	101.02	136.46	156.74	201.56	240.36	308.82	206.77	224.66	329.80	286.92	302.23	217.77	180.41	145.32	183.31	168.47	166.31	154.08
60	ER4c	ExonRegion	0	1.59	3.05	0.92	0.00	0.00	0.00	0.99	0.00	2.47	2.87	2.42	0.00	0.00	5.68	3.63	0.00	4.95	0.00	0.00	0.00	0.00	1.56	0.00
61	I4_AR1	ActiveIntronRegion	0	6.47	10.37	6.05	4.66	15.01	4.21	24.98	14.45	14.09	6.10	3.45	4.42	6.89	3.90	8.66	7.58	5.05	8.20	2.44	10.31	2.81	14.35	8.24
62	E5_Aa	NovelBoundary	0	18.15	11.45	16.14	5.03	23.77	12.83	26.50	16.51	22.45	27.99	4.69	18.31	12.99	4.41	4.45	17.52	4.30	6.72	0.00	11.82	0.00	18.00	14.94
63	ER5a	ExonRegion	0	118.62	110.89	126.48	98.21	173.83	145.78	155.57	174.41	224.72	291.30	386.07	238.32	226.47	375.64	227.46	329.02	303.30	211.41	131.95	231.23	211.48	218.36	187.07
64	E5_Da	NovelBoundary	0	0.00	11.97	3.55	1.96	25.98	5.11	12.54	22.55	16.44	13.38	9.69	6.30	0.00	0.00	0.00	0.00	4.58	0.00	9.13	15.40	7.72	10.90	11.35
65	E5a_E6a	KnownJunction	0	195.15	181.28	122.64	127.06	267.57	166.95	166.63	166.06	271.67	320.11	351.62	260.94	274.82	424.10	316.95	435.95	302.66	222.36	160.10	197.76	177.36	229.87	251.74
66	E6_Aa	NovelBoundary	0	13.71	11.58	5.44	7.06	16.13	2.16	24.95	26.16	8.13	18.24	10.16	5.85	8.28	0.00	0.00	4.36	0.00	13.27	0.00	11.89	8.53	11.63	0.00
67	ER6a	ExonRegion	0	143.09	143.64	160.59	118.71	183.68	133.15	184.28	213.96	275.83	352.94	430.93	277.81	261.94	430.60	262.88	421.63	340.98	236.82	132.39	240.35	203.57	308.59	233.28
68	E6_Da	KnownBoundary	0	146.99	130.44	143.70	121.86	159.00	126.80	256.67	230.26	270.14	369.92	436.16	191.76	311.67	405.91	374.68	377.25	408.04	241.42	128.66	254.90	228.21	297.84	222.63
69	ER6b	ExonRegion	0	101.96	90.99	157.16	96.66	131.79	115.15	176.36	197.54	258.88	311.36	377.38	255.09	250.14	395.87	280.32	355.15	284.24	273.29	177.62	203.75	232.82	240.76	210.09
70	E6_Db	NovelBoundary	0	24.23	2.50	9.17	7.36	7.56	0.00	8.61	13.43	9.17	6.63	6.69	6.30	12.82	9.83	10.75	12.56	9.54	4.02	0.00	9.20	0.00	6.06	12.21
71	E6b_E7a	KnownJunction	0	145.51	121.56	182.40	102.28	145.16	77.91	134.21	209.03	278.06	304.18	369.99	231.98	211.67	457.36	370.73	418.18	284.15	302.73	189.09	230.87	233.15	276.10	248.83
72	E6b_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.30	0.00	0.00	0.00	4.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00
73	ER7a	ExonRegion	0	80.69	70.27	94.85	59.36	95.21	90.24	125.73	139.56	174.30	203.57	242.19	116.44	161.61	282.16	222.93	252.37	206.84	205.13	123.33	156.55	180.07	174.28	143.81
74	E7_Da	NovelBoundary	0	6.89	21.77	10.97	19.15	18.34	22.32	48.14	39.64	86.08	63.39	33.38	42.91	6.49	29.20	4.45	35.89	42.36	28.06	43.67	82.64	11.18	60.07	31.50
75	E7_Db	NovelBoundary	1	3.33	15.85	12.09	17.15	21.56	20.73	31.89	22.92	54.95	35.19	18.69	32.56	78.24	8.30	8.90	37.60	22.72	15.21	13.37	42.25	15.44	31.54	11.35
76	ER7b	ExonRegion	0	0.00	2.71	0.00	0.00	5.35	0.00	1.77	4.61	6.18	10.32	9.66	4.33	9.38	5.41	4.84	11.89	4.40	1.23	7.43	3.55	2.20	7.64	6.85
77	I7	Intron	0	17.21	59.46	16.35	31.36	48.56	54.22	84.16	44.00	88.42	89.97	54.45	85.34	90.45	79.90	22.40	71.76	60.18	55.40	51.27	78.28	45.59	65.71	55.71
78	I7_AR1	ActiveIntronRegion	1	17.24	59.55	16.37	31.41	48.63	54.30	84.29	44.07	88.56	90.11	54.54	85.48	90.59	80.02	22.43	71.88	60.28	55.49	51.36	78.40	45.66	65.82	55.80
79	I7	Intron	0	18.94	72.37	22.75	39.58	63.98	40.49	54.29	87.74	79.82	72.14	5.52	8.65	10.05	7.23	7.67	6.12	7.68	20.20	18.88	27.08	4.85	16.16	9.44
80	I7_AR1	ActiveIntronRegion	0	31.45	123.99	39.20	65.70	106.90	69.67	90.58	149.80	134.76	121.86	9.10	13.64	15.08	11.90	12.37	9.73	12.66	34.30	32.17	44.45	8.10	27.73	15.06
81	ER8a	ExonRegion	0	8.49	7.07	2.17	6.37	10.84	4.14	9.21	6.89	8.93	6.14	1.33	6.02	9.51	4.49	9.32	5.15	4.29	3.61	2.80	8.22	3.29	2.15	4.15