Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C9orf6 Gene 0 43.96 44.96 34.20 24.60 41.06 34.14 36.06 33.88 34.09 65.92 56.78 89.64 62.66 44.75 43.93 44.07 35.26 11.54 33.79 17.51 34.43 51.45 25.75 2 374621 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 322940 Transcript 0 4.23 2.85 1.72 1.36 1.07 5.50 4.77 2.07 1.73 5.73 0.00 6.93 8.44 0.00 5.22 0.00 0.00 0.00 1.91 0.00 0.00 2.92 0.00 4 466200 Transcript 0 4.51 3.25 2.54 4.49 8.48 6.33 6.44 4.49 8.33 12.93 5.38 14.63 8.18 8.33 3.81 6.68 4.28 1.46 7.04 7.58 8.38 16.12 5.74 5 374624 Transcript 0 2.49 17.62 2.54 3.05 4.59 0.59 4.82 4.68 11.46 9.00 3.31 2.67 8.89 4.14 6.91 2.23 5.50 2.66 6.83 7.05 6.13 8.86 3.78 6 445175 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ER1a ExonRegion 0 0.24 0.46 0.71 0.39 1.30 2.26 0.72 0.74 2.51 1.07 4.23 0.00 0.00 3.19 2.25 5.25 0.93 4.81 3.91 1.93 6.58 2.19 3.27 8 E1_Ab KnownBoundary 0 3.11 8.88 0.00 0.00 19.78 5.45 12.06 4.97 3.59 3.33 16.58 0.00 0.00 26.02 14.09 42.64 17.20 4.44 21.27 3.07 45.59 19.10 35.77 9 ER1b ExonRegion 0 16.84 32.12 5.54 3.50 14.29 17.21 21.79 4.09 8.22 17.72 25.00 4.82 3.41 23.55 35.01 51.40 32.18 2.18 21.43 11.27 54.29 21.12 27.76 10 E1_Ac KnownBoundary 0 42.67 84.20 25.04 10.19 23.26 47.98 44.12 15.24 14.93 44.54 37.17 0.00 8.28 25.84 39.06 80.75 49.37 25.83 27.77 23.91 80.43 19.90 48.57 11 ER1c ExonRegion 0 18.81 32.69 10.52 7.82 15.35 13.29 26.18 7.50 16.38 35.84 15.32 2.86 7.70 20.22 13.36 19.91 24.10 3.52 15.45 16.74 40.33 13.33 17.23 12 E1a_E2a KnownJunction 0 3.19 5.39 1.45 1.53 3.40 0.00 6.93 3.86 11.20 10.29 18.32 6.30 26.78 9.95 8.90 3.42 30.67 0.00 7.72 6.52 34.16 5.57 0.00 13 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER1d ExonRegion 1 4.66 3.90 2.84 2.13 4.28 1.76 7.20 7.12 14.52 22.71 15.08 2.77 26.64 17.74 7.78 1.31 23.77 0.00 5.61 6.64 26.97 6.25 0.12 15 ER2a ExonRegion 1 8.47 10.83 8.62 3.72 3.96 13.26 2.55 13.53 21.33 34.63 56.91 21.81 21.65 24.21 21.31 15.78 58.40 0.75 13.11 9.33 61.75 16.63 10.22 16 E2_Da KnownBoundary 0 0.00 0.00 4.67 3.90 0.00 0.00 5.79 5.09 7.26 12.97 0.00 25.21 6.33 4.59 4.45 0.00 3.65 0.00 9.60 6.52 15.14 11.33 7.68 17 E2a_E3a KnownJunction 0 3.11 7.96 14.22 4.33 6.79 13.57 0.00 22.71 28.62 50.90 88.81 23.56 39.61 24.96 30.04 35.89 78.54 2.07 8.47 17.13 73.02 27.49 16.56 18 E2a_E7a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.30 2.28 0.00 6.30 0.00 0.00 0.00 0.00 0.00 1.70 0.00 3.20 11.55 0.00 0.00 19 ER2b ExonRegion 0 4.51 3.25 2.54 4.49 8.48 6.33 6.44 4.49 8.33 12.93 5.38 14.63 8.18 8.33 3.81 6.68 4.28 1.46 7.04 7.58 8.38 16.12 5.74 20 E2_Db NovelBoundary 0 13.78 11.91 0.00 3.56 4.33 17.77 4.24 7.60 6.97 16.90 5.37 0.00 0.00 9.18 0.00 7.69 4.77 4.10 4.24 12.02 3.15 19.41 12.80 21 I2 Intron 0 12.10 2.24 0.80 3.13 8.23 9.27 6.99 6.23 8.90 14.28 2.97 10.39 10.73 6.93 3.08 5.23 1.45 2.64 4.20 6.08 2.91 9.16 5.16 22 I2_AR1 ActiveIntronRegion 0 12.18 2.25 0.81 3.15 8.31 9.35 7.05 6.28 8.98 14.40 3.00 10.47 10.83 6.99 3.10 5.27 1.46 2.66 4.24 6.13 2.93 9.24 5.21 23 E3_Aa NovelBoundary 0 3.70 12.23 5.09 2.06 8.32 14.48 12.54 9.12 20.51 8.49 0.00 18.16 21.91 2.41 0.00 4.36 0.00 2.32 0.00 3.07 6.24 20.15 0.00 24 ER3a ExonRegion 0 20.50 25.34 21.55 17.75 19.90 19.59 19.59 17.94 32.42 54.20 80.17 65.28 53.79 49.65 35.17 71.63 49.87 18.92 35.19 17.97 46.28 45.04 30.18 25 E3_Da NovelBoundary 0 0.00 2.83 0.00 1.70 0.00 5.79 1.85 10.51 14.90 7.95 0.00 0.00 12.99 0.00 4.45 7.86 3.83 2.57 4.52 6.26 0.00 11.51 8.54 26 E3a_E4a KnownJunction 1 26.52 43.28 11.32 24.01 29.12 35.72 20.67 29.86 27.66 36.80 46.96 127.84 22.08 34.26 0.00 22.13 19.07 6.43 22.40 6.52 45.28 26.94 10.76 27 E3a_E7a KnownJunction 0 0.00 0.00 0.00 1.37 0.00 0.00 0.00 0.00 1.30 1.24 0.00 0.00 6.49 0.00 4.45 0.00 4.11 0.00 0.00 0.00 0.00 6.00 0.00 28 E4_Aa NovelBoundary 0 14.52 17.63 16.08 7.42 8.06 5.62 3.97 0.00 12.96 8.95 15.06 6.30 13.15 2.24 0.00 0.00 0.00 0.00 0.00 0.00 5.56 5.14 4.35 29 ER4a ExonRegion 0 28.72 73.34 28.23 26.12 55.46 39.77 48.75 26.38 31.78 50.87 89.84 117.51 72.30 43.18 27.47 27.25 41.20 8.61 13.90 13.46 37.21 46.19 21.36 30 E4a_E5a KnownJunction 0 40.82 82.81 44.91 34.73 58.57 27.26 63.51 31.46 26.82 58.99 103.92 149.30 103.40 55.45 39.56 18.71 63.39 11.48 13.74 14.64 39.48 64.48 31.58 31 ER5a ExonRegion 0 56.96 79.48 42.28 34.87 45.95 31.72 41.04 34.84 35.50 68.63 95.35 130.07 102.18 63.97 40.58 44.45 46.35 13.01 47.64 11.52 42.28 73.34 25.42 32 E5a_E6a KnownJunction 0 70.98 52.10 44.76 38.16 68.25 33.62 37.71 42.31 40.13 99.55 92.81 247.58 119.96 82.70 78.25 76.65 51.80 10.78 75.77 22.05 48.50 82.97 28.68 33 E6_Aa NovelBoundary 0 21.26 3.16 10.11 5.36 11.38 0.00 0.00 6.37 9.69 10.91 0.00 11.70 25.97 7.36 4.45 0.00 4.11 0.00 0.00 0.00 8.40 2.82 0.00 34 ER6a ExonRegion 0 52.96 45.28 49.74 38.75 46.83 59.73 52.47 46.39 47.95 100.17 94.53 195.28 98.87 76.79 57.45 64.42 60.64 11.73 43.71 22.59 43.13 78.37 40.02 35 E6_Da KnownBoundary 0 98.76 84.72 48.17 53.37 64.09 77.40 65.63 63.42 60.68 98.48 95.66 204.67 147.07 79.11 77.01 43.24 51.71 22.51 70.21 32.85 52.08 99.63 73.58 36 ER6b ExonRegion 0 77.47 69.48 59.23 40.78 69.19 57.15 59.01 58.20 52.12 108.08 86.39 147.49 103.00 70.02 74.65 69.69 52.30 17.65 53.52 25.17 47.61 81.82 39.79 37 E6_Db NovelBoundary 0 3.19 23.42 2.48 3.23 19.86 5.05 2.25 3.20 4.77 6.39 2.68 0.00 0.00 4.41 0.00 0.00 0.00 0.00 3.67 2.49 2.84 5.51 0.00 38 ER6c ExonRegion 0 4.23 2.85 1.72 1.36 1.07 5.50 4.77 2.07 1.73 5.73 0.00 6.93 8.44 0.00 5.22 0.00 0.00 0.00 1.91 0.00 0.00 2.92 0.00 39 I6_AR1 ActiveIntronRegion 0 1.88 3.60 3.51 8.88 5.15 5.78 3.30 10.28 10.90 19.44 0.00 4.46 5.44 1.48 1.86 0.23 1.02 0.16 1.98 6.21 1.11 3.41 1.81 40 Ix Intron 0 8.25 13.39 11.72 10.62 13.87 7.95 14.91 12.91 27.87 16.68 2.34 6.04 5.20 2.57 1.96 2.16 3.44 3.58 3.16 7.12 2.88 5.90 1.56 41 Ix_AR1 ActiveIntronRegion 0 15.73 18.24 16.76 13.36 20.31 10.41 21.43 18.18 41.83 26.30 2.67 5.84 5.68 2.72 1.66 2.68 4.03 5.81 4.40 9.72 3.63 7.08 2.34 42 Ix_SR3 SilentIntronRegion 0 2.62 10.48 9.09 6.05 7.31 4.20 7.40 6.75 21.19 6.71 2.39 7.12 7.29 2.82 1.87 1.23 4.02 1.49 1.75 4.39 0.00 4.26 2.52 43 Ix Intron 0 5.36 16.40 3.70 6.36 11.09 5.84 18.54 8.19 17.30 11.42 3.74 5.62 11.79 3.63 2.15 2.19 2.13 2.92 3.08 6.47 1.42 7.49 1.62 44 Ix_SR1 SilentIntronRegion 0 5.37 16.43 3.71 6.37 11.11 5.85 18.58 8.20 17.33 11.44 3.74 5.63 11.81 3.64 2.16 2.19 2.13 2.93 3.09 6.48 1.42 7.49 1.63 45 E7_Aa NovelBoundary 0 0.00 31.84 14.67 13.58 27.50 5.22 18.42 5.59 31.77 22.32 4.63 6.30 6.82 9.54 0.00 7.52 25.53 4.93 0.00 8.95 2.84 9.37 0.00 46 ER7a ExonRegion 0 4.99 35.24 5.08 4.73 9.17 1.18 9.65 9.36 21.61 16.76 6.63 5.35 11.29 8.28 9.37 4.46 6.89 5.32 13.65 14.10 12.26 11.71 7.55