Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RAD23B Gene 0 165.83 256.38 233.53 143.37 273.32 243.22 265.00 252.86 190.20 317.57 632.41 495.93 543.16 524.30 492.89 495.16 568.01 350.22 266.76 294.54 282.25 296.21 210.48 2 419616 Transcript 0 1.97 0.05 0.46 0.00 0.19 9.97 11.68 1.11 0.00 0.90 15.67 0.02 0.06 7.14 9.51 9.96 10.97 8.20 1.81 1.40 1.94 1.97 3.05 3 416373 Transcript 1 12.37 34.49 10.99 5.42 27.54 20.38 42.53 20.40 6.43 7.20 14.88 49.70 66.64 36.49 100.55 21.98 27.51 19.57 20.24 29.59 5.42 7.60 10.06 4 358015 Transcript 0 128.83 178.27 207.60 173.80 210.04 115.67 180.15 207.85 154.75 223.13 384.99 391.13 255.59 576.28 497.01 463.40 382.14 198.57 274.13 174.47 98.52 197.77 210.94 5 374678 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 442587 Transcript 0 0.99 5.69 0.84 1.66 4.05 1.28 8.17 2.40 0.85 2.40 13.60 1.80 6.99 3.07 13.03 12.30 10.69 1.08 0.39 3.73 0.51 0.02 0.69 7 457811 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 ER1a ExonRegion 0 0.17 0.10 0.93 0.00 0.38 4.16 0.04 0.00 0.00 0.53 7.06 0.03 0.11 7.34 3.82 8.31 1.27 2.02 3.61 2.80 3.89 0.82 2.94 9 E1_Ab KnownBoundary 0 0.00 0.00 3.28 0.00 0.00 16.81 0.00 0.00 0.00 2.79 12.79 0.00 0.00 9.71 0.00 24.87 0.00 12.81 13.08 12.46 11.55 6.06 28.34 10 E1_Ac NovelBoundary 0 6.89 6.45 10.26 0.00 12.22 120.16 17.58 6.04 6.39 8.76 208.58 28.51 18.18 95.77 230.55 315.73 154.18 166.39 231.16 79.00 119.04 71.21 144.69 11 ER1b ExonRegion 1 4.89 8.13 10.03 2.04 8.53 103.61 15.39 3.89 4.40 27.38 187.73 8.66 8.79 88.21 142.16 185.20 117.59 80.72 138.76 51.99 87.32 53.26 92.87 12 E1_Da KnownBoundary 0 10.15 14.93 19.22 9.16 23.68 176.60 30.60 26.57 18.55 59.61 175.25 0.00 6.33 99.36 183.57 149.11 159.70 198.81 153.51 56.76 92.30 55.11 89.80 13 E1a_E1d NovelJunction 0 0.00 0.00 15.88 5.93 0.00 0.00 0.00 18.85 13.83 64.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 108.57 0.00 0.00 0.00 0.00 0.00 14 E1a_E1e KnownJunction 0 3.78 0.00 0.00 0.00 0.00 15.79 23.32 2.22 0.00 1.26 24.27 0.00 0.00 6.95 15.20 11.62 20.66 14.38 0.00 0.00 0.00 3.12 3.16 15 ER1c ExonRegion 1 19.19 19.93 21.53 8.00 26.94 292.98 71.10 21.43 16.55 67.48 397.40 12.27 15.48 375.23 386.25 398.76 376.30 217.30 330.22 115.32 239.25 134.04 217.80 16 E1_Ad KnownBoundary 0 17.34 3.09 22.59 13.19 16.98 144.92 44.65 49.66 31.60 72.07 212.69 5.85 12.50 109.37 82.45 244.21 245.35 335.73 137.79 93.38 185.39 84.81 193.86 17 ER1d ExonRegion 1 23.28 22.08 26.96 10.90 31.73 342.92 77.92 27.66 22.23 82.58 444.01 4.95 20.10 487.00 352.71 460.25 458.35 258.95 354.03 137.99 311.67 166.38 269.33 18 ER1e ExonRegion 1 6.13 9.89 26.40 7.06 7.75 50.16 13.20 37.27 27.31 84.26 280.42 20.23 35.43 248.86 167.31 226.91 267.61 173.70 160.29 110.27 233.75 80.79 127.76 19 E1_Ae KnownBoundary 1 17.41 31.97 35.60 24.74 16.30 64.22 26.81 87.49 55.15 135.57 295.50 45.01 81.16 432.11 259.97 463.81 291.91 455.57 193.32 162.73 260.14 156.64 306.11 20 ER1f ExonRegion 1 22.97 99.73 85.99 40.19 92.78 319.63 149.97 147.42 118.31 245.23 543.20 126.97 175.49 543.32 354.04 482.02 463.28 433.68 233.73 265.48 373.21 229.99 190.60 21 E1b_E3a KnownJunction 0 47.19 128.86 157.80 98.32 129.71 268.77 176.34 347.20 261.51 476.40 864.90 420.44 390.23 924.96 663.95 821.84 621.22 706.95 585.05 415.40 421.69 531.63 360.32 22 E1b_E4a NovelJunction 0 0.00 5.66 0.00 0.00 0.00 13.34 0.00 20.37 11.49 6.85 0.00 0.00 0.00 0.00 0.00 7.35 0.00 8.25 9.22 2.94 0.00 0.00 8.19 23 ER2a ExonRegion 0 1.97 11.38 1.69 3.31 8.10 2.56 16.34 4.79 1.70 4.80 6.45 3.60 13.98 1.55 8.25 6.13 16.61 2.17 0.79 7.45 1.03 0.05 1.38 24 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.74 0.00 0.00 4.59 17.80 18.46 4.77 0.00 0.00 0.00 0.00 0.00 0.00 25 ER3a ExonRegion 0 45.51 98.11 260.88 130.70 97.83 221.93 157.20 430.79 346.42 660.76 1738.69 793.03 779.35 1219.73 869.92 1285.63 1266.22 975.77 858.14 605.08 681.32 726.89 546.50 26 E3a_E4a KnownJunction 0 63.42 114.19 412.73 228.44 117.06 320.10 155.32 528.25 377.22 817.19 2065.79 995.27 1182.55 1442.41 1190.68 1925.22 1474.43 1144.44 1080.97 765.54 884.47 1156.76 790.38 27 ER4a ExonRegion 0 73.26 93.14 381.27 185.08 127.00 225.05 179.64 572.25 442.17 827.75 1713.39 752.41 1042.07 1157.41 961.37 1204.38 1460.98 869.34 691.82 781.62 847.35 799.78 469.09 28 E4a_E5a KnownJunction 0 127.13 138.20 355.69 180.63 237.35 224.98 263.92 574.83 494.44 818.43 1597.62 884.54 1285.63 1116.32 1252.37 1131.07 1337.26 760.88 653.10 932.42 671.40 645.09 415.04 29 ER5a ExonRegion 0 92.08 167.00 379.72 182.19 171.85 273.73 217.09 538.36 443.72 805.72 1631.93 1140.84 1321.34 1337.95 1057.76 1074.25 1421.28 902.64 760.83 762.24 937.52 688.28 432.98 30 E5_Da KnownBoundary 0 148.84 246.40 492.65 247.35 121.56 266.38 243.91 649.54 473.37 946.67 1301.54 1089.20 1586.58 1249.52 1042.34 950.18 1623.56 749.10 541.00 734.15 924.50 577.37 275.47 31 ER5b ExonRegion 0 112.51 335.86 383.75 193.24 206.39 401.81 315.46 481.17 427.74 776.22 1878.34 1333.18 1791.75 1620.09 1178.85 1314.21 1706.67 795.30 719.57 816.35 1348.72 786.07 522.06 32 E5_Ab KnownBoundary 0 148.40 312.71 277.90 157.39 256.37 512.43 438.80 368.19 330.52 516.04 1423.78 1150.42 1686.90 1639.48 1065.71 867.72 1450.02 812.57 567.17 683.85 1010.00 614.72 439.88 33 ER5c ExonRegion 0 108.60 335.33 377.34 181.12 296.84 469.19 361.77 464.09 352.93 625.68 1519.66 1438.19 2075.34 1585.72 1070.26 1067.74 1467.52 932.96 674.37 667.77 1072.89 554.65 514.34 34 E5_Db KnownBoundary 0 171.66 416.97 444.10 221.62 388.54 575.52 458.19 495.39 359.54 714.74 1487.38 1376.40 2444.97 1401.44 1220.23 1126.46 1567.65 1378.66 725.48 775.38 1119.96 549.82 495.96 35 ER5d ExonRegion 1 127.73 317.95 424.97 222.41 328.98 471.22 377.19 438.78 365.53 716.45 1280.56 1412.17 2312.43 1258.32 1053.41 1511.87 1518.93 1410.94 558.11 672.71 1094.01 532.14 545.29 36 E5c_E6a KnownJunction 1 103.06 330.01 447.00 260.71 347.45 400.74 372.82 501.92 389.23 779.18 1256.37 1645.59 1982.99 1294.61 1049.88 2940.43 1451.42 2288.39 743.74 681.17 1124.53 671.24 857.22 37 ER6a ExonRegion 0 181.08 387.00 483.63 262.31 327.21 431.40 384.59 551.69 449.23 872.06 1678.27 1623.94 2390.32 2024.17 1193.61 2838.06 1698.49 2071.69 997.36 773.17 1162.18 1227.68 967.73 38 E6a_E7a KnownJunction 0 252.86 525.70 594.83 300.26 356.20 504.99 438.36 629.05 521.44 971.06 2393.34 1781.08 3112.30 1908.71 1214.54 1550.53 2175.22 1669.70 768.02 914.91 1244.38 637.50 647.91 39 I6_AR1 ActiveIntronRegion 0 35.00 9.33 4.33 8.20 11.53 1.78 11.41 4.65 2.30 2.61 1.88 11.50 15.37 1.12 3.30 2.48 4.59 4.21 4.43 2.37 0.61 0.29 1.22 40 ER7a ExonRegion 0 178.20 748.44 545.82 345.87 343.69 534.37 506.65 621.42 500.52 926.91 2090.82 1346.67 2139.39 1753.99 1147.97 1523.24 1964.45 1899.40 766.78 752.72 1140.45 645.03 620.43 41 E7a_E8a KnownJunction 0 253.38 831.10 740.84 456.88 1162.14 1591.07 1795.92 844.73 651.32 1332.22 2518.27 1505.29 2523.21 1864.63 1013.54 3734.66 2215.61 3566.28 1284.74 856.62 1122.43 1518.04 1210.79 42 E7a_E11b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 ER8a ExonRegion 0 178.10 477.35 513.67 367.10 558.33 646.63 622.29 526.35 422.35 719.08 1584.61 1489.56 2426.88 1623.45 1368.92 1959.66 1582.39 1390.47 763.32 719.82 873.11 796.72 716.50 44 E8a_E9a KnownJunction 1 191.07 459.59 598.12 407.91 373.26 493.13 380.99 529.73 457.00 622.90 2102.16 1470.33 2312.84 1532.00 952.35 933.77 2247.59 795.20 557.76 844.67 1065.04 408.73 416.91 45 ER9a ExonRegion 0 322.52 878.52 451.99 299.10 834.56 819.31 947.82 418.72 362.82 504.28 1185.40 1116.53 1719.78 1393.63 939.39 931.48 1285.49 765.68 442.34 615.44 673.65 324.08 402.27 46 E9a_E10a KnownJunction 1 932.54 2587.63 491.35 369.95 2820.12 2222.19 2944.77 470.50 380.49 528.97 1637.68 2282.24 4034.48 2540.77 2482.36 1776.29 1973.72 966.82 817.53 1257.70 909.42 627.09 870.62 47 ER10a ExonRegion 0 158.69 498.43 278.96 222.20 727.99 389.97 529.76 252.48 224.45 304.73 953.87 911.57 1134.91 1116.72 797.79 819.51 1290.96 457.24 425.89 426.43 356.92 212.96 435.26 48 E10_Da KnownBoundary 0 35.27 46.24 35.13 16.61 19.86 5.11 35.64 25.71 18.72 12.76 9.32 12.00 20.78 7.77 38.57 15.21 16.83 26.94 24.09 21.54 3.09 5.20 4.35 49 E10a_E11a KnownJunction 0 123.21 228.71 358.50 353.04 281.32 105.85 238.35 350.94 273.49 364.27 656.85 730.59 484.71 1401.15 1033.94 1076.04 766.06 440.73 630.51 274.65 177.92 303.17 487.76 50 ER10b ExonRegion 1 12.37 34.49 10.99 5.42 27.54 20.38 42.53 20.40 6.43 7.20 14.88 49.70 66.64 36.49 100.55 21.98 27.51 19.57 20.24 29.59 5.42 7.60 10.06 51 E10_Db NovelBoundary 1 4981.11 4188.46 3656.55 4513.58 3357.64 2468.29 4413.18 3819.19 3877.65 3325.89 1641.36 1450.52 1559.31 956.56 2022.87 5476.68 3106.59 6281.18 3764.25 5265.82 2386.89 2201.83 5332.12 52 ER11a ExonRegion 0 261.59 304.89 263.32 167.28 348.79 241.15 301.57 269.86 190.75 304.66 497.35 438.47 282.07 327.70 454.19 314.14 380.38 153.87 191.89 248.77 117.65 289.31 143.88 53 E11_Ab KnownBoundary 0 118.76 103.27 116.94 83.64 82.43 91.88 127.94 116.98 94.53 75.21 101.18 195.81 67.20 81.70 233.39 91.00 130.15 28.02 103.06 95.68 24.40 95.03 37.90 54 ER11b ExonRegion 0 43.53 47.92 95.32 67.06 65.48 55.43 75.12 95.59 64.16 56.52 105.94 86.51 61.41 53.29 99.30 66.73 130.17 27.33 74.95 78.12 36.76 75.52 29.53 55 E11_Da KnownBoundary 0 50.60 98.40 116.20 69.42 90.07 73.48 134.48 109.05 72.25 78.60 166.25 132.49 149.02 79.17 176.03 75.11 162.04 39.88 48.85 89.04 84.20 89.03 26.89 56 ER11c ExonRegion 1 59.76 52.22 110.75 51.28 65.36 49.21 75.45 109.44 63.14 76.33 109.50 121.59 98.24 46.58 129.66 55.86 91.74 30.95 42.90 74.97 22.42 72.49 23.61 57 ER11d ExonRegion 0 1.69 1.22 0.98 1.09 0.00 0.00 0.53 2.77 0.00 0.46 0.77 4.33 0.00 0.00 2.90 0.00 0.00 1.11 0.00 0.00 0.00 0.83 1.17