Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FKTN Gene 0 29.03 85.40 47.47 57.33 46.48 44.64 42.85 44.08 54.59 50.40 39.23 96.60 79.88 54.80 29.52 44.64 48.30 33.19 32.03 62.94 41.06 58.67 33.76 2 223528 Transcript 0 2.12 2.03 0.00 0.00 0.00 1.83 5.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.96 3.30 0.00 0.00 0.00 7.35 2.78 0.00 3 448551 Transcript 0 0.00 6.58 3.61 3.40 6.79 2.78 0.00 1.81 4.57 4.11 7.11 25.51 44.80 7.24 5.32 4.36 29.27 8.50 0.00 7.48 5.00 0.00 0.00 4 490134 Transcript 0 2.96 1.89 1.78 1.18 1.61 10.60 8.90 0.00 10.29 2.81 4.40 14.53 15.74 5.67 0.00 5.29 20.35 4.40 5.24 15.19 8.12 5.34 3.18 5 479846 Transcript 0 0.00 3.52 1.72 2.04 1.49 0.93 2.49 1.83 3.72 3.71 2.04 6.94 10.36 6.67 0.77 1.51 2.98 0.94 1.29 9.65 0.00 1.73 0.74 6 357998 Transcript 0 0.22 3.72 0.25 0.19 0.65 0.82 1.23 0.18 2.98 2.29 1.40 1.49 1.13 1.01 0.90 1.02 1.94 0.76 0.44 3.23 1.90 2.37 1.22 7 374705 Transcript 0 0.73 3.49 2.11 2.83 7.36 4.18 4.10 6.17 1.68 1.52 4.28 17.60 12.78 4.88 1.21 1.59 4.56 0.80 2.76 6.23 2.07 2.58 2.02 8 457847 Transcript 0 0.00 3.35 2.60 2.96 0.00 0.00 0.00 0.00 1.27 0.00 0.00 7.20 0.00 0.00 0.00 0.00 4.02 0.00 0.00 0.00 0.00 0.00 3.24 9 ER1a ExonRegion 0 2.12 2.03 0.00 0.00 0.00 1.83 5.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.96 3.30 0.00 0.00 0.00 7.35 2.78 0.00 10 ER1b ExonRegion 0 2.12 2.71 0.14 0.00 0.00 1.83 5.44 1.54 1.10 0.00 4.51 0.00 0.00 1.99 0.00 6.60 6.60 0.00 0.00 0.47 16.16 5.32 2.61 11 E1a_E2a KnownJunction 0 7.33 19.86 1.60 3.43 15.62 2.90 10.42 4.52 5.03 4.06 27.85 0.00 0.00 19.95 4.45 51.10 18.70 6.47 4.05 40.08 12.42 9.06 15.96 12 E1a_E4b KnownJunction 0 6.96 18.15 1.66 0.00 4.33 20.90 28.66 2.01 8.65 1.45 15.95 0.00 0.00 2.47 0.00 20.85 26.74 10.86 0.00 9.08 45.22 51.19 38.84 13 ER1c ExonRegion 0 5.17 15.14 2.31 0.00 3.57 6.32 11.77 2.69 3.71 2.80 18.68 0.00 0.00 6.14 0.64 37.65 21.27 10.06 0.00 13.00 35.99 25.23 21.21 14 ER1d ExonRegion 1 10.16 27.93 2.86 1.45 13.91 16.14 26.04 6.68 9.39 8.33 38.14 0.58 0.00 20.14 8.51 56.07 42.47 15.15 1.70 31.77 43.49 48.20 38.37 15 ER2a ExonRegion 0 7.04 23.08 4.33 8.74 10.44 7.08 14.72 14.28 11.96 18.08 20.95 14.45 17.38 28.97 11.61 26.49 38.71 15.38 1.77 40.29 6.44 17.60 7.85 16 E2a_E3a KnownJunction 0 0.00 2.83 3.67 1.53 0.00 0.00 0.00 1.52 1.79 4.08 2.00 0.00 6.66 11.54 0.00 0.00 0.00 0.00 0.00 3.00 0.00 0.00 0.00 17 E2a_E4b KnownJunction 0 0.00 6.58 3.61 3.40 6.79 2.78 0.00 1.81 4.57 4.11 7.11 25.51 44.80 7.24 5.32 4.36 29.27 8.50 0.00 7.48 5.00 0.00 0.00 18 ER3a ExonRegion 0 0.00 7.73 1.49 2.53 1.17 2.80 5.36 3.97 5.15 3.41 4.12 14.53 24.42 6.23 2.32 4.54 4.82 1.16 0.19 14.33 0.00 2.05 2.22 19 E3a_E4b KnownJunction 0 0.00 0.00 0.00 2.06 3.31 0.00 2.12 0.00 4.22 3.63 0.00 6.30 0.00 2.24 0.00 0.00 4.11 1.66 3.67 11.63 0.00 3.12 0.00 20 ER4a ExonRegion 0 0.22 3.72 0.25 0.19 0.65 0.82 1.23 0.18 2.98 2.29 1.40 1.49 1.13 1.01 0.90 1.02 1.94 0.76 0.44 3.23 1.90 2.37 1.22 21 ER4b ExonRegion 1 2.90 21.00 9.43 11.09 17.41 28.84 32.23 10.68 27.73 25.58 43.13 94.30 71.19 37.15 14.07 33.91 79.49 19.26 13.13 61.35 31.00 39.90 24.38 22 E4_Da KnownBoundary 0 0.00 9.27 14.40 17.58 7.13 21.69 22.92 10.72 15.83 21.49 24.01 132.34 88.31 60.45 15.20 50.59 89.67 9.45 17.04 106.29 11.37 33.13 11.35 23 ER4c ExonRegion 0 4.05 15.23 14.22 11.10 8.05 20.62 14.30 12.08 34.23 20.32 48.08 87.91 78.44 52.67 18.06 49.77 77.89 23.15 11.99 75.82 43.71 54.74 28.36 24 E4b_E5a KnownJunction 1 3.70 20.59 17.09 18.71 11.80 12.89 40.59 12.20 37.15 24.98 25.80 156.05 80.35 47.85 19.78 35.80 80.50 16.79 13.37 88.01 21.75 47.76 22.28 25 ER4d ExonRegion 0 4.48 16.75 14.56 15.55 9.76 11.97 33.33 11.69 39.60 18.96 27.52 116.64 81.39 51.11 18.77 34.44 70.29 19.24 14.43 78.22 23.85 56.99 30.23 26 ER5a ExonRegion 1 6.00 35.69 12.62 12.67 13.74 18.12 30.08 11.90 31.21 18.41 32.67 176.86 81.22 44.18 14.17 34.13 71.13 18.79 11.63 81.84 30.52 34.69 12.33 27 E5_Da KnownBoundary 0 0.00 3.16 4.58 5.13 14.26 10.79 16.03 0.00 16.38 6.55 7.16 31.36 19.15 26.78 0.00 7.86 22.63 0.00 4.61 23.59 5.50 2.33 12.98 28 E5a_E6a KnownJunction 0 0.00 0.00 0.00 1.30 3.82 4.32 0.00 4.44 3.01 1.26 4.69 12.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.94 3.09 2.94 0.00 29 E5a_E7a KnownJunction 0 16.67 35.13 1.60 1.53 8.66 24.13 19.61 3.70 12.56 17.54 23.37 82.38 82.30 25.72 22.25 10.85 33.85 10.20 13.27 37.33 29.47 42.62 11.27 30 ER5b ExonRegion 0 2.96 1.89 1.78 1.18 1.61 10.60 8.90 0.00 10.29 2.81 4.40 14.53 15.74 5.67 0.00 5.29 20.35 4.40 5.24 15.19 8.12 5.34 3.18 31 E5_Db NovelBoundary 1 3.48 8.29 8.81 8.26 8.66 2.84 26.32 4.19 10.91 5.88 5.32 76.22 33.76 17.25 0.00 10.94 43.20 4.19 4.80 34.26 0.00 4.84 19.21 32 I5 Intron 0 2.12 7.26 2.30 11.58 6.17 7.74 12.67 6.17 12.74 4.31 5.55 62.36 49.35 15.88 4.24 8.67 11.35 2.36 2.63 21.20 1.34 7.07 1.66 33 I5_SR1 SilentIntronRegion 0 2.23 7.45 2.42 12.17 6.49 7.89 13.26 6.48 13.39 4.53 5.75 65.17 51.32 16.17 4.27 9.11 11.79 2.49 2.77 21.78 1.33 7.34 1.50 34 E6_Aa NovelBoundary 0 6.00 25.32 6.45 22.04 7.56 2.78 19.52 18.61 25.55 8.38 14.06 64.97 67.20 24.78 9.02 13.07 16.27 7.83 0.00 40.78 4.82 12.06 3.93 35 ER6a ExonRegion 0 2.20 10.46 3.31 7.20 5.60 8.23 12.31 7.80 2.04 3.31 8.15 34.94 38.33 9.70 3.64 4.76 13.68 2.39 8.29 15.74 3.13 1.79 6.05 36 E6_Da NovelBoundary 1 23.49 43.54 1.48 19.05 40.32 26.97 52.02 9.45 19.47 9.32 20.37 85.98 133.27 26.72 13.35 11.71 30.01 10.74 0.00 41.80 8.40 6.18 7.85 37 E6a_E7a KnownJunction 0 0.00 0.00 3.02 0.00 12.65 0.00 0.00 6.28 0.00 0.00 0.00 5.55 0.00 4.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.00 0.00 38 I6 Intron 0 4.01 9.28 4.78 14.36 8.64 11.34 14.23 4.45 8.10 5.23 4.30 34.97 44.05 9.05 7.68 7.45 9.93 3.64 5.50 16.82 1.60 5.10 1.80 39 I6_SR1 SilentIntronRegion 0 1.96 4.71 0.00 6.59 4.96 7.65 6.75 0.00 0.85 0.00 2.69 23.50 38.12 7.22 4.59 2.76 4.59 0.00 4.43 10.85 0.00 0.97 1.36 40 I6_AR1 ActiveIntronRegion 1 4.54 9.77 6.41 18.54 8.98 11.99 16.59 5.86 7.74 5.05 3.16 34.65 50.55 10.10 9.42 7.94 10.73 5.40 5.71 16.53 1.23 4.82 1.64 41 I6_SR2 SilentIntronRegion 0 3.79 10.37 4.84 15.06 11.82 13.43 17.44 6.35 12.20 9.44 7.89 35.69 39.43 8.36 7.97 11.86 13.79 3.04 6.62 23.55 4.17 5.46 2.76 42 I6_AR2 ActiveIntronRegion 0 0.00 5.37 3.87 3.16 1.28 1.47 3.65 0.00 3.85 0.14 1.62 7.10 18.57 5.85 0.00 0.00 0.00 2.66 1.02 0.00 0.00 3.17 0.00 43 I6_SR3 SilentIntronRegion 0 5.29 10.89 2.70 5.32 6.37 10.64 7.71 0.00 10.10 4.24 4.43 54.76 37.75 8.65 4.52 2.97 6.60 1.20 4.53 14.87 0.00 10.66 1.47 44 E7_Aa NovelBoundary 0 24.08 21.90 11.38 24.07 23.85 20.78 25.79 15.90 21.99 1.40 6.79 49.67 55.35 4.65 0.00 7.60 18.98 5.60 0.00 33.24 0.00 11.94 0.00 45 ER7a ExonRegion 0 13.15 39.37 14.03 12.50 15.02 30.65 38.04 9.85 33.98 21.70 40.98 137.44 100.54 59.03 16.98 40.56 62.39 25.13 19.92 58.29 38.20 42.15 20.80 46 E7a_E8a KnownJunction 0 13.85 20.59 13.39 7.06 25.55 23.45 33.61 11.05 31.08 26.54 33.01 129.94 66.72 110.42 28.31 34.09 57.41 34.20 54.87 69.35 60.42 37.66 31.76 47 ER8a ExonRegion 0 12.92 37.41 15.10 14.83 19.13 22.59 31.06 15.93 27.93 25.76 27.84 91.45 69.94 78.86 21.91 49.39 81.26 53.98 25.92 69.32 75.81 33.12 27.91 48 E8_Da KnownBoundary 1 18.97 31.97 19.43 20.58 15.53 42.08 43.63 10.43 37.82 15.82 31.06 42.16 60.71 76.58 17.68 25.98 60.87 30.72 9.60 70.95 64.68 38.70 24.58 49 ER8b ExonRegion 1 18.31 32.58 12.09 22.13 22.40 27.43 34.71 17.82 40.63 30.98 35.57 70.92 58.75 96.48 22.58 49.52 66.87 58.37 19.44 75.96 79.67 33.42 35.09 50 E8b_E9a KnownJunction 1 2.82 29.67 24.19 23.11 23.51 25.10 26.54 20.78 37.07 44.89 41.22 44.71 39.12 79.99 6.30 47.85 76.30 77.64 21.55 81.49 62.15 25.96 35.60 51 ER9a ExonRegion 0 12.81 33.47 15.89 18.20 14.32 24.60 21.91 13.15 35.86 28.30 45.91 56.45 44.41 78.21 24.28 53.73 56.35 48.04 18.74 71.36 62.25 32.07 44.90 52 E9b_E10a KnownJunction 0 18.00 60.65 20.08 11.39 11.12 13.06 13.34 10.39 33.19 22.38 31.74 44.26 40.74 70.28 25.22 92.88 67.04 38.80 12.80 102.65 44.67 41.03 51.30 53 E9b_E13a NovelJunction 0 7.56 12.96 0.00 0.00 4.33 5.79 4.50 5.54 7.90 3.14 9.58 11.40 0.00 9.65 11.37 24.10 9.07 12.48 3.86 9.08 5.44 3.12 4.27 54 ER9b ExonRegion 0 18.20 55.31 20.59 12.81 12.31 20.91 15.09 10.37 32.61 22.71 34.02 34.64 48.78 76.66 19.73 79.06 55.46 35.11 13.38 88.94 50.24 33.75 54.03 55 ER10a ExonRegion 1 15.89 62.49 25.72 20.29 11.84 20.69 23.82 14.85 35.89 21.13 49.53 95.15 56.82 72.77 17.52 52.74 54.57 34.91 10.12 72.14 56.13 36.45 44.07 56 E10a_E11a KnownJunction 0 16.60 82.95 33.71 23.61 3.99 38.10 27.25 24.52 30.87 15.37 42.64 112.09 72.40 71.28 39.06 59.64 43.38 24.83 18.73 82.13 42.63 18.43 44.73 57 ER11a ExonRegion 1 13.57 52.02 24.69 23.68 13.10 22.92 22.35 20.01 31.44 18.13 38.72 117.06 65.87 70.21 16.45 45.11 50.62 16.63 18.92 74.86 36.59 38.03 41.73 58 E11a_E12a KnownJunction 1 12.97 41.70 20.28 38.56 25.30 14.08 13.69 21.07 25.40 17.08 42.85 88.68 48.05 58.45 10.14 48.96 40.30 8.00 30.40 49.79 21.93 17.76 34.15 59 E12_Aa NovelBoundary 0 9.93 25.39 2.90 5.93 7.98 5.11 6.05 8.42 5.99 9.00 10.11 13.95 13.64 16.95 0.00 8.54 21.88 4.27 0.00 17.45 2.66 2.39 7.94 60 ER12a ExonRegion 0 15.21 57.99 26.62 28.32 11.02 23.68 25.52 18.30 29.77 23.48 46.25 120.82 56.06 56.50 22.62 39.82 64.86 25.13 18.34 52.64 34.04 35.96 25.17 61 E12_Da NovelBoundary 1 0.00 6.71 0.00 4.43 0.00 0.00 2.25 4.81 2.86 4.78 10.37 0.00 46.91 0.00 4.70 4.02 0.00 1.66 0.00 3.26 0.00 0.00 0.00 62 E12a_E13a KnownJunction 0 10.67 72.82 13.31 23.87 19.61 13.69 20.62 18.24 21.15 20.25 52.70 56.12 25.97 52.92 22.25 23.58 60.50 23.01 30.12 47.94 52.45 47.33 23.99 63 E13_Aa NovelBoundary 0 6.45 11.77 1.48 12.79 3.74 11.41 0.00 13.80 12.38 2.87 7.53 6.30 6.82 4.77 4.45 7.95 16.27 21.72 4.80 8.88 3.15 3.12 3.59 64 ER13a ExonRegion 0 19.63 75.57 33.66 26.99 17.56 24.68 32.22 15.64 39.71 26.20 54.57 68.70 59.82 78.21 31.41 54.53 55.07 41.57 25.74 77.40 78.34 39.25 34.97 65 E13_Da KnownBoundary 0 6.59 80.31 38.85 27.90 4.07 24.47 82.67 19.92 41.81 28.72 36.85 51.47 79.86 104.89 26.70 65.88 64.42 56.34 27.20 94.66 67.89 22.29 23.56 66 E13a_E13b KnownJunction 0 0.00 3.35 2.60 2.96 0.00 0.00 0.00 0.00 1.27 0.00 0.00 7.20 0.00 0.00 0.00 0.00 4.02 0.00 0.00 0.00 0.00 0.00 3.24 67 ER13b ExonRegion 0 14.44 56.45 22.92 38.60 33.14 38.77 44.73 27.31 46.37 42.01 38.25 127.62 108.52 53.90 19.87 41.16 40.25 27.23 26.07 66.84 30.38 61.17 25.87 68 E13_Ab KnownBoundary 0 17.34 75.32 30.69 64.59 31.58 26.12 44.38 27.19 59.03 71.51 54.17 68.27 74.83 39.44 19.78 44.60 35.16 36.93 20.71 55.61 38.24 77.28 28.34 69 ER13c ExonRegion 0 15.24 63.90 26.70 64.89 43.40 50.49 47.33 31.79 69.57 54.94 45.83 113.10 77.74 53.46 12.85 53.32 48.85 27.76 28.63 78.92 33.23 70.58 29.19 70 E13_Db KnownBoundary 0 9.93 82.88 52.45 67.02 52.04 53.49 73.00 52.29 78.79 78.01 77.44 93.48 47.24 61.10 13.35 31.10 53.48 33.41 25.13 86.22 38.61 62.83 36.11 71 ER13d ExonRegion 0 43.27 119.18 71.85 82.16 66.37 57.22 50.26 64.63 68.84 66.73 41.75 91.62 79.62 55.93 39.83 48.55 49.22 38.47 41.99 63.44 45.73 69.28 40.74