Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-2B6.1 Gene 0 0.25 0.40 0.14 0.00 0.00 0.00 0.21 0.00 0.00 0.00 0.15 0.00 0.34 0.16 0.16 0.00 0.00 0.00 0.00 0.17 0.00 0.00 0.12 2 416309 Transcript 0 0.82 0.78 0.38 0.00 0.00 0.00 0.04 0.00 0.00 0.00 0.49 0.00 1.11 0.52 0.52 0.00 0.00 0.00 0.00 0.56 0.00 0.00 0.36 3 ER1a ExonRegion 0 0.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.04 0.00 0.11 0.07 0.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 E2_Aa NovelBoundary 0 14.60 3.29 1.18 0.00 0.00 0.00 3.84 2.55 0.00 0.00 2.68 13.05 0.00 0.00 13.97 0.00 0.00 2.45 0.00 3.26 2.90 0.00 8.11 6 ER2a ExonRegion 0 3.44 5.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.64 0.00 3.26 2.37 3.29 0.00 0.00 0.00 0.00 0.07 0.00 0.00 2.49 7 E2_Da NovelBoundary 0 3.78 0.00 7.24 3.16 0.00 2.84 6.62 2.26 1.13 4.27 0.00 6.30 0.00 4.36 14.83 0.00 0.00 4.27 0.00 0.00 5.31 0.00 0.00 8 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 I2 Intron 0 12.67 8.57 6.07 4.95 7.71 2.03 4.99 1.71 2.45 3.03 1.71 4.74 0.86 3.03 6.05 3.95 2.20 1.84 4.94 3.31 1.47 1.85 1.30 10 I2_SR1 SilentIntronRegion 0 12.67 8.57 6.07 4.95 7.71 2.03 4.99 1.71 2.45 3.03 1.71 4.74 0.86 3.03 6.05 3.95 2.20 1.84 4.94 3.31 1.47 1.85 1.30 11 E3_Aa NovelBoundary 0 0.00 12.56 6.65 3.80 0.00 0.00 8.30 2.51 4.40 4.41 4.63 0.00 12.82 9.54 0.00 7.86 4.77 2.57 4.42 14.83 0.00 3.12 11.35 12 ER3a ExonRegion 0 2.00 0.23 0.73 0.00 0.00 0.00 0.05 0.00 0.00 0.00 1.75 0.00 4.43 1.23 0.00 0.00 0.00 0.00 0.00 3.86 0.00 0.00 0.05 13 E3_Da NovelBoundary 0 0.00 0.00 8.87 15.75 14.43 0.00 4.50 2.55 13.31 4.59 5.37 12.60 0.00 14.77 4.45 0.00 7.85 14.38 4.80 6.26 3.15 2.57 3.16 14 E3a_E4a KnownJunction 0 0.00 0.00 1.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 I3 Intron 0 22.29 13.38 10.74 15.19 20.11 6.57 16.26 10.84 7.06 11.26 13.00 18.01 12.12 12.05 20.66 10.76 10.08 6.94 6.26 17.24 2.57 5.28 7.06 16 I3_AR1 ActiveIntronRegion 0 129.34 63.84 61.75 83.75 113.96 41.31 75.32 60.48 28.98 57.27 76.65 84.93 31.20 62.51 106.92 40.09 46.08 17.39 18.95 56.32 6.01 30.20 14.12 17 I3 Intron 0 27.30 13.22 5.66 19.90 36.39 11.92 32.04 11.59 2.39 14.19 17.59 40.70 27.75 31.77 30.94 30.02 15.84 7.35 11.47 19.15 4.19 8.33 9.98 18 I3_AR1 ActiveIntronRegion 0 40.76 11.71 5.85 20.28 52.41 11.75 36.76 14.77 1.66 17.48 17.51 27.55 17.14 31.17 31.45 33.40 17.25 7.95 14.90 19.73 3.57 9.27 9.00 19 I3_SR1 SilentIntronRegion 0 10.70 15.43 5.54 19.86 16.79 12.40 26.75 7.80 3.38 10.31 18.05 58.37 41.91 33.18 30.93 26.35 14.41 6.76 7.35 18.80 5.06 7.33 11.47 20 E4_Aa NovelBoundary 0 25.26 40.78 8.90 34.26 45.42 0.00 71.10 8.83 4.77 22.73 16.43 63.17 77.92 36.02 27.94 22.22 8.23 2.11 12.33 21.54 0.00 22.60 12.55 21 ER4a ExonRegion 0 0.00 0.18 0.13 0.00 0.00 0.00 0.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00