Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-533K9.2 Gene 0 5.60 85.70 26.02 2.27 1.91 0.00 30.45 2.88 9.18 2.78 0.00 0.00 0.00 0.27 0.42 0.00 0.00 17.04 26.59 41.36 0.00 0.21 0.00 2 448030 Transcript 0 2.98 45.86 14.03 1.23 1.04 0.00 16.52 1.55 4.97 1.43 0.00 0.00 0.00 0.13 0.21 0.00 0.00 9.46 14.99 22.60 0.00 0.11 0.00 3 IG44 Intergenic 0 5.26 59.30 28.44 2.23 3.17 0.00 40.98 4.73 16.85 2.79 0.00 0.00 0.00 0.00 0.05 0.00 0.00 33.05 33.36 52.56 0.00 0.00 0.00 4 IG44_SR1 SilentIntergenicRegion 0 5.26 59.35 28.46 2.23 3.18 0.00 41.01 4.73 16.86 2.79 0.00 0.00 0.00 0.00 0.05 0.00 0.00 33.08 33.39 52.61 0.00 0.00 0.00 5 ER1a ExonRegion 0 0.00 42.69 19.57 0.99 4.00 0.00 24.47 2.54 4.45 0.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.95 23.18 40.65 0.00 1.01 0.00 6 E1_Da NovelBoundary 0 2.96 45.58 80.84 4.76 0.00 0.00 33.30 21.32 38.14 6.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38.80 22.40 69.22 0.00 0.00 0.00 7 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 I1 Intron 0 7.25 65.84 53.06 3.91 4.01 0.00 42.73 6.62 22.75 4.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41.82 43.81 64.23 0.12 0.00 0.00 9 I1_SR1 SilentIntronRegion 0 7.26 65.98 53.17 3.92 4.02 0.00 42.81 6.63 22.80 4.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41.90 43.90 64.37 0.12 0.00 0.00 10 E2_Aa NovelBoundary 0 0.00 47.36 52.69 3.50 15.62 0.00 111.91 4.23 7.29 4.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35.65 22.59 30.81 0.00 0.00 0.00 11 ER2a ExonRegion 0 12.50 83.40 53.94 4.38 2.76 0.00 42.23 5.40 18.89 2.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41.16 65.25 51.35 0.00 0.00 0.00 12 E2_Da NovelBoundary 0 14.82 26.11 10.35 2.50 3.14 0.00 7.38 1.68 11.89 0.99 0.00 0.00 6.01 0.00 0.00 0.00 0.00 8.91 25.13 27.29 0.00 0.00 0.00 13 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 I2 Intron 0 3.00 51.17 41.70 2.53 2.12 0.00 30.98 6.71 18.77 4.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.71 28.52 53.29 0.12 0.00 0.00 15 I2_SR1 SilentIntronRegion 0 3.00 51.22 41.75 2.53 2.13 0.00 31.02 6.72 18.79 4.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.74 28.55 53.35 0.12 0.00 0.00 16 E3_Aa NovelBoundary 0 20.30 188.65 64.34 7.52 0.00 0.00 32.37 4.03 27.11 7.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.04 21.37 125.47 0.00 0.00 0.00 17 ER3a ExonRegion 0 8.34 140.49 21.51 0.86 0.00 0.00 41.30 2.28 8.74 5.25 0.00 0.00 0.00 1.17 0.94 0.00 0.00 9.33 9.53 42.41 0.00 0.00 0.00 18 E3_Da NovelBoundary 0 3.78 121.43 52.78 3.23 0.00 0.00 84.31 4.03 26.27 5.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.50 8.47 63.85 0.00 0.00 0.00 19 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 I3 Intron 0 1.84 47.43 30.51 2.65 3.26 0.00 47.36 6.28 13.61 3.87 0.00 0.00 0.00 0.23 0.00 0.00 0.00 38.88 38.25 54.45 0.00 0.00 0.00 21 I3_SR1 SilentIntronRegion 0 1.85 47.51 30.56 2.65 3.27 0.00 47.44 6.29 13.63 3.87 0.00 0.00 0.00 0.23 0.00 0.00 0.00 38.94 38.32 54.54 0.00 0.00 0.00 22 I3 Intron 0 3.42 53.31 21.31 1.82 1.44 0.00 30.44 4.63 10.91 3.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.77 15.44 31.71 0.00 0.00 0.00 23 I3_SR1 SilentIntronRegion 0 3.43 53.48 21.39 1.83 1.45 0.00 30.55 4.64 10.94 3.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.79 15.50 31.82 0.00 0.00 0.00 24 E4_Aa NovelBoundary 0 0.00 101.50 48.46 1.37 0.00 0.00 60.11 14.50 29.80 1.67 0.00 6.30 0.00 0.00 0.00 0.00 0.00 5.47 9.60 52.60 0.00 0.00 0.00 25 ER4a ExonRegion 0 6.01 94.78 31.10 4.84 2.53 0.00 23.77 3.72 11.39 4.04 0.00 0.00 0.00 0.00 0.92 0.00 0.00 7.43 24.29 43.53 0.00 0.00 0.00 26 E4_Da NovelBoundary 0 6.82 195.89 80.69 5.16 0.00 0.00 93.58 18.65 31.45 15.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.43 61.27 68.71 0.00 0.00 0.00 27 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 I4 Intron 0 9.11 168.35 59.99 3.48 5.13 0.00 51.59 11.54 31.58 7.06 0.00 0.00 0.00 0.00 0.06 0.00 0.29 31.40 31.49 74.98 0.06 0.00 0.00 29 I4_AR1 ActiveIntronRegion 0 5.43 176.16 40.12 2.28 3.86 0.00 42.90 8.26 18.00 5.21 0.00 0.00 0.00 0.00 0.33 0.00 0.00 6.93 15.33 41.30 0.00 0.00 0.00 30 I4_SR1 SilentIntronRegion 0 9.66 129.05 68.75 3.21 5.17 0.00 54.81 12.22 33.52 7.21 0.00 0.00 0.00 0.00 0.00 0.00 0.19 45.57 37.12 79.22 0.00 0.00 0.00 31 I4_AR3 ActiveIntronRegion 0 10.35 225.30 57.89 4.60 5.82 0.00 51.69 12.39 36.36 7.90 0.00 0.00 0.00 0.00 0.00 0.00 0.60 23.42 32.03 87.69 0.20 0.00 0.00 32 E5_Aa NovelBoundary 0 0.00 110.31 28.18 3.46 0.00 0.00 78.48 25.34 51.27 4.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.61 30.97 105.14 0.00 0.00 0.00 33 ER5a ExonRegion 0 0.00 51.34 0.18 0.00 0.03 0.00 16.88 0.00 1.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.27 12.66 25.42 0.00 0.00 0.00 34 IG45 Intergenic 0 1.51 30.15 16.20 1.61 1.13 0.02 28.24 2.58 8.87 2.07 0.00 0.02 0.00 0.00 0.02 0.03 0.00 19.96 23.26 46.79 0.00 0.03 0.01 35 IG45_SR1 SilentIntergenicRegion 0 1.94 37.19 18.91 1.97 1.58 0.03 34.42 3.46 10.47 2.90 0.00 0.03 0.00 0.00 0.04 0.05 0.00 23.72 27.91 55.09 0.00 0.05 0.02 36 IG45_AR1 ActiveIntergenicRegion 0 0.69 19.53 20.65 2.54 0.00 0.00 33.07 1.26 9.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.10 19.90 41.39 0.00 0.00 0.00 37 IG45_SR2 SilentIntergenicRegion 0 0.24 19.53 9.04 0.88 0.06 0.00 14.08 1.06 6.75 0.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.77 14.97 39.05 0.00 0.00 0.00 38 IG45_SR3 SilentIntergenicRegion 0 1.74 10.26 12.78 0.52 0.83 0.00 17.10 0.53 2.65 0.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.50 11.80 10.40 0.00 0.00 0.00