Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	RP11-213G2.2	Gene	0	31.73	40.32	47.94	51.15	41.67	44.27	44.60	52.34	44.21	45.03	27.15	38.35	27.59	13.66	13.51	12.92	13.43	29.14	27.09	43.68	1.35	10.71	6.65
2	431724	Transcript	0	7.56	9.80	11.97	13.71	10.90	10.72	11.58	14.41	11.59	11.46	6.84	8.33	7.79	3.75	4.10	4.29	4.01	8.03	6.77	10.31	0.24	3.08	2.24
3	297820	Transcript	0	37.90	37.44	40.92	48.98	44.18	39.83	42.95	44.22	33.59	43.25	21.71	23.13	15.01	11.14	13.14	8.55	10.73	19.48	27.57	34.23	1.63	9.46	5.85
4	ER1a	ExonRegion	0	4.02	13.72	16.42	7.72	7.01	9.19	16.74	16.03	12.76	11.84	7.02	14.97	18.39	4.81	2.57	5.14	6.85	5.09	7.16	10.70	0.00	2.54	0.03
5	E1_Da	NovelBoundary	0	3.78	0.00	9.05	5.76	8.32	2.56	10.60	4.35	7.06	1.18	0.00	0.00	0.00	0.00	0.00	0.00	4.77	1.91	0.00	18.22	0.00	0.00	3.41
6	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER2a	ExonRegion	0	6.75	23.91	25.43	19.92	36.65	28.78	36.95	36.61	38.33	24.62	20.83	29.60	20.14	12.20	10.50	8.74	10.52	21.19	24.21	47.43	0.00	7.62	5.00
8	E2_Da	NovelBoundary	0	6.59	9.21	3.99	0.00	23.85	8.46	27.12	8.91	13.72	12.65	2.53	0.00	6.49	0.00	0.00	6.75	13.00	0.00	0.00	2.56	0.00	0.00	0.00
9	E2a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER3a	ExonRegion	0	0.00	0.00	7.35	1.36	0.00	0.00	2.65	2.59	1.85	2.29	2.90	2.16	0.00	0.00	0.00	0.00	0.00	2.77	0.00	4.26	0.00	0.00	0.00
11	ER3b	ExonRegion	0	11.48	18.52	19.61	21.92	21.90	14.98	21.02	40.26	36.15	22.19	18.11	31.29	18.56	11.14	9.94	7.53	12.13	32.32	27.65	44.41	1.41	10.96	3.81
12	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E3b_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER3c	ExonRegion	0	0.00	18.30	6.13	5.45	2.68	14.67	15.89	13.83	19.76	11.47	9.66	4.33	4.69	4.87	0.00	0.00	3.30	9.24	0.00	14.89	2.20	2.08	2.94
15	ER4a	ExonRegion	0	17.87	31.47	33.56	33.39	30.12	34.62	40.08	39.44	34.00	42.33	20.64	26.19	9.93	10.53	6.37	5.93	8.89	40.10	12.68	31.74	1.21	6.44	3.94
16	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	E4b_E5b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER4b	ExonRegion	0	2.12	12.20	6.13	0.68	2.68	9.17	3.31	4.32	2.47	8.60	3.87	8.66	4.69	6.50	1.45	0.00	0.00	0.92	0.00	4.26	0.00	0.00	0.00
19	I4	Intron	0	5.39	7.38	5.11	9.73	11.06	12.11	15.29	9.74	11.04	13.44	8.43	12.44	10.34	7.47	2.30	4.42	4.99	3.78	3.45	7.24	0.28	3.68	3.33
20	I4_SR1	SilentIntronRegion	0	3.43	7.35	3.10	12.39	13.22	15.80	15.29	9.59	10.81	15.81	8.33	11.97	12.04	7.56	2.21	1.94	2.40	3.18	5.59	10.17	0.46	3.75	3.31
21	I4_AR1	ActiveIntronRegion	0	7.29	9.93	5.35	12.43	14.66	17.72	23.31	11.09	15.64	16.10	11.81	20.21	14.72	10.60	3.16	7.76	9.70	3.22	2.81	6.70	0.08	6.75	4.36
22	E5_Ab	NovelBoundary	0	15.04	0.00	11.32	7.29	8.49	11.41	21.99	4.76	4.72	5.48	10.53	0.00	0.00	3.00	0.00	12.39	14.03	2.20	0.00	9.59	3.15	0.00	4.35
23	ER5a	ExonRegion	0	0.53	4.58	3.68	5.11	0.67	2.29	0.99	2.16	3.09	6.02	0.97	6.49	5.86	0.81	0.73	3.72	0.00	5.08	0.80	0.53	0.00	1.56	0.00
24	ER5b	ExonRegion	0	39.05	57.63	56.79	52.25	40.60	55.51	48.68	50.17	46.03	43.13	32.86	21.75	24.82	20.55	11.67	13.92	14.13	39.18	26.37	38.97	2.68	9.41	11.41
25	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	E5b_E6b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER5c	ExonRegion	0	19.05	22.37	14.70	19.08	16.05	20.17	37.07	15.56	11.12	27.53	11.60	4.33	4.69	4.87	5.80	5.94	13.20	7.39	12.74	23.40	0.00	4.17	5.87
28	ER6a	ExonRegion	0	16.93	12.88	32.68	47.25	8.03	12.23	15.45	44.94	28.82	28.67	12.24	1.44	10.94	1.62	1.93	9.91	14.30	24.64	6.37	14.18	0.00	1.39	2.94
29	ER6b	ExonRegion	0	43.10	32.48	56.52	71.37	38.92	33.62	41.48	57.51	49.37	53.59	30.63	13.78	30.13	12.80	11.96	26.48	21.31	41.55	29.05	40.49	1.60	13.01	14.95
30	E6_Da	KnownBoundary	0	38.90	23.55	35.78	37.79	11.04	21.92	28.97	40.70	27.31	32.69	24.69	0.00	31.00	14.24	4.45	29.14	12.53	26.20	16.57	37.01	2.29	19.41	10.41
31	E6a_E6c	KnownJunction	0	42.08	18.94	58.13	74.38	57.05	18.74	39.92	50.15	43.34	49.59	27.64	0.00	7.95	5.77	0.00	32.56	4.58	45.18	49.88	36.75	3.03	12.00	24.84
32	E6_Ac	KnownBoundary	0	21.34	19.40	52.39	37.92	48.81	39.30	43.28	26.62	36.17	37.45	11.95	5.70	26.13	2.47	4.70	11.71	12.44	17.95	8.66	21.60	0.00	10.29	0.00
33	ER6c	ExonRegion	0	40.21	37.96	61.27	70.42	58.87	58.68	64.43	61.07	52.70	53.14	42.52	44.74	48.46	22.74	18.37	32.69	17.60	43.73	42.47	48.94	2.20	17.36	21.54
34	ER6d	ExonRegion	0	50.94	46.11	75.04	72.47	64.08	90.74	77.15	66.43	60.82	68.22	45.39	49.94	28.79	30.77	27.51	18.65	16.68	38.04	50.42	61.48	2.77	28.20	14.33
35	E6b_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	E6c_E7b	KnownJunction	0	70.61	66.17	86.04	71.89	119.44	142.93	98.44	72.82	49.04	77.93	28.85	37.36	20.62	22.60	10.01	4.36	37.59	25.62	51.48	59.76	2.78	25.23	3.76
37	ER6e	ExonRegion	0	56.30	58.16	72.30	61.33	74.92	83.62	61.70	60.50	54.10	65.14	33.63	32.04	20.64	25.34	20.31	2.97	19.81	27.72	54.15	54.89	0.88	25.84	2.94
38	ER7a	ExonRegion	0	18.34	20.34	26.55	23.17	23.19	26.28	19.42	24.20	20.17	26.00	10.95	11.55	9.38	8.12	7.74	0.99	6.60	13.55	16.99	21.28	0.00	6.95	3.92
39	ER7b	ExonRegion	0	86.29	73.79	79.50	99.57	60.30	73.38	69.35	90.20	68.05	83.64	43.07	67.60	56.43	18.50	26.45	15.22	24.38	31.79	42.46	62.98	0.06	20.28	10.16
40	E7a_E8b	KnownJunction	0	161.88	117.02	78.65	114.90	105.86	92.56	87.71	115.05	83.62	79.54	53.86	92.13	40.42	25.60	36.96	8.20	19.07	25.20	40.38	59.32	0.00	23.27	8.11
41	E7b_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	ER7c	ExonRegion	0	4.23	4.07	1.84	2.04	1.34	0.00	1.32	5.19	2.47	2.29	1.93	0.00	0.00	0.81	2.90	0.00	0.00	3.70	0.00	0.00	0.00	4.17	0.00
43	ER8a	ExonRegion	0	16.40	22.37	17.46	26.92	18.73	22.92	16.88	30.68	25.01	20.64	10.63	24.89	17.59	8.53	10.88	6.69	7.43	10.16	7.17	15.96	0.55	8.33	2.94
44	ER8b	ExonRegion	0	57.57	63.22	103.42	118.95	81.91	87.47	77.58	109.69	84.40	95.97	55.73	93.53	51.98	23.13	28.29	31.96	20.47	48.02	51.81	87.14	4.00	18.10	11.62
45	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	E8b_E9b	KnownJunction	0	81.35	100.31	111.85	159.59	102.04	69.90	128.20	131.11	100.98	134.63	61.86	72.02	53.89	24.96	64.40	30.42	22.16	57.45	82.83	100.22	5.75	15.86	15.88
47	ER8c	ExonRegion	0	59.26	73.21	90.68	128.11	93.65	66.02	83.41	108.89	70.40	105.52	48.32	47.62	37.52	24.36	31.91	26.75	19.81	51.74	66.89	87.23	6.61	14.58	11.75
48	I8_AR2	ActiveIntronRegion	0	3.19	11.37	13.66	12.02	6.50	2.02	7.57	6.14	6.18	4.78	1.54	4.08	3.23	1.01	0.79	0.52	2.19	3.13	2.95	7.04	0.10	1.01	0.91
49	E9_Aa	NovelBoundary	0	3.19	27.82	7.78	11.89	24.53	0.00	8.74	7.60	7.41	1.61	0.00	0.00	12.50	0.00	4.45	0.00	0.00	1.70	0.00	8.31	0.00	0.00	0.00
50	ER9a	ExonRegion	0	15.34	17.79	23.89	35.78	25.42	15.13	24.82	27.22	21.61	27.53	15.95	16.24	9.38	5.28	7.98	7.43	4.95	14.78	16.72	23.94	1.65	3.65	2.94
51	ER9b	ExonRegion	0	53.86	68.69	65.83	84.43	76.70	65.14	59.28	62.68	55.61	53.75	28.81	43.06	33.90	9.86	17.33	16.54	15.37	29.42	36.28	48.04	1.91	12.39	9.01
52	ER9c	ExonRegion	0	13.36	18.81	6.20	8.52	16.22	17.42	11.50	11.23	3.71	5.52	0.00	0.00	0.00	2.54	10.15	1.86	3.92	2.54	0.00	2.66	0.00	1.82	1.10
53	IG32	Intergenic	0	5.44	14.41	11.17	18.01	13.66	4.15	13.71	12.23	11.09	7.11	1.72	3.69	2.77	0.90	1.37	1.67	1.36	5.69	7.24	12.53	0.13	0.81	0.62
54	IG32_SR2	SilentIntergenicRegion	0	11.34	33.85	22.40	34.06	28.12	11.10	34.06	36.35	22.96	16.08	5.61	10.17	11.75	4.13	4.55	8.75	5.54	12.78	23.97	21.15	0.27	1.96	1.56
55	IG32_AR4	ActiveIntergenicRegion	0	6.03	22.41	9.81	16.18	14.67	3.69	15.21	18.53	17.74	16.37	2.53	3.73	3.56	2.62	4.21	0.98	8.71	9.78	4.95	13.24	0.00	3.83	2.97
56	IG32_SR3	SilentIntergenicRegion	0	5.14	16.35	10.51	19.06	39.89	13.49	21.69	20.63	15.41	11.54	3.05	1.29	9.77	0.94	3.00	1.15	4.75	4.40	2.74	15.91	0.00	1.77	3.35
57	IG32_AR5	ActiveIntergenicRegion	0	11.37	24.41	23.01	26.27	20.80	7.67	24.92	24.50	16.97	13.34	2.65	9.99	5.52	1.87	3.82	4.66	2.91	13.80	13.55	17.64	0.32	1.73	1.29
58	IG32_SR4	SilentIntergenicRegion	0	5.99	16.01	13.14	17.33	15.38	3.81	12.75	12.38	10.75	5.28	0.90	3.79	2.98	0.66	1.22	1.06	1.17	4.62	7.18	11.32	0.05	0.88	0.59
59	IG32_SR6	SilentIntergenicRegion	0	4.57	12.73	7.69	18.41	9.50	1.94	9.24	7.41	8.66	6.91	0.90	1.87	0.42	0.15	0.38	0.20	0.09	3.33	3.46	11.15	0.03	0.32	0.24