Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TBC1D2 Gene 0 11.84 4.83 9.38 18.04 7.96 18.15 4.92 22.15 27.17 27.11 6.42 1.20 0.49 1.76 2.31 2.30 2.60 6.79 5.74 4.38 15.73 5.81 8.57 2 375066 Transcript 0 0.53 0.00 0.00 0.00 0.00 4.70 0.08 0.00 0.08 0.29 0.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.00 0.00 0.00 0.00 0.00 3 465784 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 342112 Transcript 0 0.00 0.00 1.63 0.00 0.00 12.66 0.00 1.89 8.01 3.87 2.68 0.00 0.00 2.47 0.00 0.00 0.00 10.07 0.00 0.00 0.00 2.82 4.18 5 375064 Transcript 0 0.00 2.83 0.00 6.26 0.00 2.44 0.00 6.00 9.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.60 0.00 0.00 0.00 0.00 6 395133 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 493589 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 375063 Transcript 0 10.37 10.23 2.79 9.34 13.56 36.72 6.89 27.24 29.48 27.52 1.51 2.73 0.00 0.01 0.24 0.01 1.01 2.31 4.14 2.86 1.36 1.52 1.20 9 ER1a ExonRegion 0 1.06 0.00 0.00 0.00 0.00 9.40 0.17 0.00 0.15 0.57 1.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.99 0.00 0.00 0.00 0.00 10 ER1b ExonRegion 0 5.23 0.00 1.06 0.80 0.00 14.67 1.32 0.00 1.48 2.20 4.78 0.00 0.00 2.26 0.00 0.00 0.00 0.00 9.38 0.41 2.69 0.00 0.00 11 E1_Ac KnownBoundary 0 10.74 0.00 1.69 0.00 0.00 19.02 2.03 0.00 8.25 7.55 4.53 0.00 0.00 5.12 0.00 0.00 0.00 1.66 9.60 0.00 2.29 0.00 0.00 12 E1_Ad KnownBoundary 0 0.00 0.00 1.83 2.03 0.00 0.00 0.00 0.00 1.36 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 3.00 6.18 0.00 0.00 13 ER1c ExonRegion 0 6.35 0.00 1.23 1.36 0.00 13.57 1.72 0.00 2.47 2.29 5.80 0.00 0.00 3.25 0.00 0.00 0.00 0.00 12.74 2.13 8.37 0.00 0.00 14 ER1d ExonRegion 0 1.25 1.10 3.95 2.34 2.28 2.07 0.73 4.72 7.66 8.78 3.94 0.00 0.00 1.59 0.88 0.52 0.90 3.43 5.34 2.27 9.92 3.17 4.36 15 E1_Ae KnownBoundary 0 6.45 0.00 6.53 11.75 8.06 8.18 0.00 10.43 25.00 16.73 0.00 0.00 0.00 5.77 4.45 4.02 0.00 1.58 18.07 5.50 11.24 3.12 4.35 16 ER1e ExonRegion 0 11.48 3.92 3.83 7.32 4.79 16.79 6.64 19.58 18.07 19.17 8.16 0.00 0.00 2.15 2.79 0.40 2.66 6.19 8.87 3.62 13.32 4.77 9.53 17 E1_Da KnownBoundary 0 7.33 13.68 7.33 12.39 3.31 0.00 0.00 17.46 26.79 25.95 9.95 0.00 0.00 0.00 0.00 0.00 9.26 11.23 16.09 7.93 13.90 11.88 0.00 18 E1a_E6b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER1f ExonRegion 0 5.85 3.42 5.54 9.70 5.95 5.20 3.83 14.05 29.76 20.55 8.73 0.00 0.00 3.34 4.95 0.00 3.46 13.65 8.54 1.60 14.52 10.37 5.98 20 E1b_E2a KnownJunction 0 9.19 2.43 1.80 1.27 4.33 2.33 0.00 7.89 13.89 13.40 5.11 0.00 0.00 2.47 4.45 0.00 7.76 6.55 0.00 0.00 16.93 10.90 0.00 21 E1b_E3a KnownJunction 0 0.00 0.00 1.63 0.00 0.00 12.66 0.00 1.89 8.01 3.87 2.68 0.00 0.00 2.47 0.00 0.00 0.00 10.07 0.00 0.00 0.00 2.82 4.18 22 ER2a ExonRegion 0 3.56 0.10 3.26 5.16 3.94 2.91 1.48 7.35 11.66 11.54 5.23 0.00 0.00 2.38 3.39 2.28 3.53 6.02 7.87 3.46 14.18 3.26 5.79 23 E2a_E3a KnownJunction 0 0.00 0.00 2.96 8.89 4.16 8.12 0.00 7.80 9.64 5.51 7.53 0.00 0.00 3.00 4.45 3.16 3.74 15.59 7.91 3.26 17.48 8.08 4.18 24 ER3a ExonRegion 0 9.31 0.76 2.90 4.35 8.15 14.39 5.05 10.55 22.80 19.67 7.32 4.01 0.00 3.67 6.02 3.74 3.91 15.20 10.54 2.46 17.53 5.53 13.30 25 E3a_E4a KnownJunction 0 10.67 0.00 9.17 11.05 7.30 5.28 4.24 24.07 24.04 19.69 4.90 0.00 0.00 7.12 14.09 7.35 0.00 20.77 11.67 3.26 26.87 7.59 18.87 26 ER4a ExonRegion 0 6.48 3.07 11.66 8.82 6.39 8.95 3.68 21.01 26.70 29.02 7.54 5.43 0.00 1.43 4.83 3.48 2.51 14.81 9.41 5.21 25.66 5.26 13.35 27 E4a_E5a KnownJunction 0 7.11 0.00 8.75 7.06 0.00 12.66 2.16 22.71 22.28 12.25 2.68 0.00 0.00 4.59 5.19 4.36 0.00 5.89 16.94 0.00 17.24 8.63 8.71 28 ER5a ExonRegion 0 12.14 0.45 13.10 12.49 7.20 13.83 8.24 23.44 27.19 26.16 6.28 8.79 5.17 2.96 6.23 2.27 3.98 8.64 4.40 6.20 26.96 6.28 12.09 29 E5_Ab KnownBoundary 0 35.71 2.70 24.36 21.31 16.47 29.59 10.20 15.32 39.03 36.34 9.37 18.61 0.00 2.47 14.09 4.27 14.12 15.46 8.00 9.65 19.03 0.00 15.11 30 ER5b ExonRegion 0 7.94 1.21 8.46 7.49 6.97 9.97 6.97 10.63 23.12 24.19 5.75 1.01 1.85 1.02 4.18 5.18 6.06 9.74 7.78 4.55 20.55 4.12 8.61 31 E5a_E6a KnownJunction 0 0.00 2.83 7.51 11.09 8.66 8.18 2.08 13.60 20.11 20.68 2.63 0.00 0.00 7.36 0.00 0.00 13.65 9.12 9.22 6.07 14.39 0.00 7.94 32 E5b_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER5c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER6a ExonRegion 0 3.89 2.99 6.18 7.24 3.75 7.76 3.76 8.81 11.12 20.15 5.30 2.15 1.34 2.11 1.72 3.72 2.65 4.24 3.97 6.01 15.14 5.80 13.80 35 E6_Da KnownBoundary 0 3.56 0.00 6.03 4.73 8.23 0.00 12.76 4.23 15.13 11.77 4.16 6.30 0.00 0.00 0.00 4.36 4.77 2.49 0.00 3.26 11.80 6.25 7.60 36 E6a_E8b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 ER6b ExonRegion 0 10.47 2.16 5.19 6.87 4.33 7.94 6.80 14.12 18.50 24.98 8.87 0.26 2.18 1.45 0.82 3.69 3.94 11.90 8.08 6.27 19.54 7.33 11.10 38 E6_Ab KnownBoundary 0 6.52 2.89 8.43 6.96 0.00 2.16 1.94 19.51 16.93 23.37 2.68 0.00 0.00 2.30 0.00 0.00 8.98 6.67 0.00 8.56 29.47 5.63 4.35 39 ER6c ExonRegion 0 5.07 0.36 4.09 4.39 3.19 5.69 3.23 10.24 12.61 16.26 7.42 0.00 0.00 1.05 1.54 2.49 2.96 7.45 2.39 8.10 16.88 6.89 11.57 40 E6b_E7b KnownJunction 0 7.56 0.00 4.41 4.00 6.96 2.90 4.50 11.01 5.82 16.87 12.63 0.00 0.00 0.00 0.00 0.00 0.00 9.49 0.00 0.00 13.84 14.39 17.16 41 I6_AR1 ActiveIntronRegion 0 4.21 1.08 0.39 11.33 7.13 22.84 4.07 10.04 18.53 19.01 1.35 1.90 0.00 0.36 1.33 0.16 0.00 2.37 2.54 5.67 3.40 0.28 1.68 42 I6_AR2 ActiveIntronRegion 0 8.26 2.55 2.96 13.32 3.35 12.32 2.63 11.13 19.55 18.98 1.11 0.56 0.00 1.23 0.29 0.73 0.52 6.20 1.99 4.63 2.53 0.33 1.23 43 E7_Aa NovelBoundary 0 16.37 31.57 1.54 20.44 12.65 25.44 4.50 28.14 30.27 20.55 2.47 0.00 0.00 0.00 0.00 0.00 0.00 1.82 4.33 2.56 0.00 0.00 0.00 44 ER7a ExonRegion 0 10.37 10.23 2.79 9.34 13.56 36.72 6.89 27.24 29.48 27.52 1.51 2.73 0.00 0.01 0.24 0.01 1.01 2.31 4.14 2.86 1.36 1.52 1.20 45 E7_Ab KnownBoundary 0 43.12 21.11 6.24 19.78 12.99 54.85 15.77 20.21 37.47 41.45 0.00 0.00 0.00 0.00 6.30 0.00 0.00 11.19 4.80 5.69 12.23 3.12 4.35 46 ER7b ExonRegion 0 17.36 12.37 9.45 32.52 19.87 36.86 9.94 32.09 46.26 48.87 9.51 0.00 1.79 4.99 2.87 2.19 1.53 11.72 3.71 6.07 28.99 9.34 8.84 47 E7a_E8a KnownJunction 0 9.78 15.79 9.22 41.72 19.27 29.13 4.50 34.58 44.27 46.28 12.27 0.00 0.00 2.12 0.00 3.76 0.00 6.05 0.00 8.76 8.65 12.06 3.33 48 ER8a ExonRegion 0 14.31 11.32 16.96 38.31 7.87 30.91 5.14 38.60 46.43 41.61 8.44 0.00 0.00 4.73 0.93 2.90 1.51 7.78 9.18 5.57 33.88 12.11 11.37 49 E8_Ab KnownBoundary 0 17.19 0.00 11.50 56.04 12.31 18.46 0.00 41.44 43.72 54.91 15.32 0.00 0.00 2.47 0.00 0.00 9.07 7.05 4.24 11.95 36.88 5.94 7.94 50 ER8b ExonRegion 0 12.34 10.23 15.05 36.48 7.36 31.55 3.25 29.11 45.82 46.49 14.95 0.00 0.00 2.28 2.40 4.55 6.19 8.34 1.89 9.04 22.93 9.90 8.17 51 E8b_E9a KnownJunction 0 9.93 9.60 13.75 31.20 8.32 22.15 7.64 32.74 51.56 31.43 9.42 0.00 0.00 7.12 4.45 0.00 4.77 4.48 4.80 8.05 28.73 16.23 20.57 52 ER8c ExonRegion 0 6.70 8.13 14.30 27.03 5.35 20.17 9.27 28.23 45.08 30.39 11.28 0.00 0.00 4.87 5.80 1.98 3.30 5.85 3.19 4.26 24.98 14.93 14.68 53 ER9a ExonRegion 0 14.15 6.89 18.01 30.26 8.08 20.84 5.16 27.24 36.41 33.43 6.76 0.39 0.00 0.72 2.30 4.52 4.82 6.66 3.96 6.30 16.84 7.55 10.61 54 E9b_E10a KnownJunction 0 19.63 6.45 11.80 23.04 0.00 18.00 0.00 15.32 13.45 18.43 2.16 0.00 0.00 0.00 0.00 0.00 0.00 1.74 4.05 0.00 8.03 0.00 9.82 55 ER9b ExonRegion 0 20.56 10.46 8.58 15.19 0.00 13.62 1.32 8.15 11.65 13.60 2.21 0.00 0.00 0.00 1.66 0.00 0.00 1.85 0.00 2.13 10.07 0.00 9.23 56 ER10a ExonRegion 0 24.68 5.97 10.48 27.76 12.34 33.24 4.67 28.78 28.63 37.59 7.01 0.00 0.00 3.33 5.44 0.00 4.17 7.74 5.37 2.71 9.87 1.98 11.31 57 E10a_E11a KnownJunction 0 19.34 3.35 11.38 37.69 14.18 30.55 9.45 45.96 28.36 32.42 16.64 0.00 0.00 0.00 4.45 4.02 0.00 5.89 0.00 0.00 12.23 14.39 0.00 58 ER11a ExonRegion 0 16.15 4.52 12.43 42.47 12.80 26.99 4.08 42.36 44.01 41.30 8.96 2.00 0.91 2.65 1.28 2.32 2.36 10.14 6.68 3.25 22.43 6.67 8.27 59 E11a_E12a KnownJunction 0 21.63 10.06 24.69 41.25 12.99 21.64 6.14 41.48 50.14 50.55 9.21 5.70 0.00 0.00 0.00 0.00 4.77 2.20 4.61 5.56 26.56 14.88 3.67 60 E11a_E12b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 61 ER12a ExonRegion 0 23.72 6.40 16.69 43.13 12.75 20.17 12.89 41.43 42.28 43.89 13.70 0.89 0.69 1.67 2.73 0.70 1.94 5.54 5.62 6.57 23.92 15.57 5.96 62 E12_Ab KnownBoundary 0 34.15 6.38 15.70 53.54 11.12 20.78 16.69 46.33 37.47 38.17 15.16 0.00 5.68 2.47 0.00 0.00 0.00 7.05 9.32 8.56 24.09 11.76 10.24 63 ER12b ExonRegion 0 24.94 8.57 17.00 50.50 11.19 27.51 6.91 53.86 46.78 37.69 6.83 0.49 1.97 2.86 1.71 3.44 0.00 6.24 8.11 6.00 20.28 10.94 17.42 64 E12a_E13a KnownJunction 0 24.82 2.96 20.46 41.85 3.99 32.37 11.79 40.87 28.04 39.06 2.68 5.85 0.00 2.47 4.45 0.00 0.00 4.15 0.00 9.01 11.74 8.21 11.18 65 E12a_E13b KnownJunction 0 0.00 2.83 0.00 6.26 0.00 2.44 0.00 6.00 9.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.60 0.00 0.00 0.00 0.00 66 ER13a ExonRegion 0 19.47 4.47 16.91 34.34 5.35 27.51 9.27 35.26 24.70 32.80 5.03 4.33 0.00 1.62 2.90 0.00 0.00 3.70 1.27 6.81 12.34 8.33 8.81 67 ER13b ExonRegion 0 16.59 3.62 11.10 18.77 8.00 15.01 3.97 22.62 25.52 25.57 5.47 0.66 0.00 0.88 1.78 1.48 0.66 2.48 4.04 3.64 12.52 5.53 7.16 68 E13_Da KnownBoundary 0 10.82 6.25 15.70 11.02 3.23 7.50 9.58 7.64 16.67 12.49 2.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.87 4.65 4.01 69 ER13c ExonRegion 0 2.76 2.18 4.08 2.79 0.00 4.73 3.33 3.01 5.37 4.35 1.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.20 0.00 1.09