Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	NANS	Gene	0	43.77	22.04	56.00	18.79	27.61	24.19	22.09	33.18	22.56	32.60	59.99	34.85	33.78	52.10	81.17	60.55	52.26	30.44	25.45	23.32	39.29	49.10	40.77
2	424455	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	210444	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	495319	Transcript	0	8.41	0.00	9.46	1.71	3.48	2.73	6.82	2.22	2.29	0.83	3.40	3.15	0.00	2.30	2.23	5.77	4.35	0.00	0.00	2.88	1.14	1.35	2.09
5	480925	Transcript	0	3.94	0.79	4.76	1.71	3.95	2.86	1.79	1.41	2.65	1.27	1.26	0.00	5.51	1.32	5.63	3.01	3.72	2.33	1.24	0.41	1.13	0.00	2.86
6	461452	Transcript	0	21.10	11.57	12.42	10.96	17.14	11.66	10.79	13.54	9.38	10.62	3.96	7.89	6.34	5.84	13.49	13.43	8.51	12.03	6.26	9.57	4.58	4.12	10.32
7	415280	Transcript	0	22.63	8.87	13.92	8.64	14.74	16.57	6.39	12.13	5.37	8.23	7.04	4.36	7.02	8.33	4.58	11.72	5.69	4.10	1.16	4.46	3.21	5.19	5.95
8	427646	Transcript	0	27.65	9.66	17.73	9.61	18.87	17.49	14.10	26.23	10.37	16.09	10.34	12.12	11.89	10.57	14.16	12.26	9.91	9.97	3.66	9.07	2.70	3.54	6.12
9	ER1a	ExonRegion	1	15.31	3.59	3.35	1.32	7.94	11.80	6.66	1.21	1.03	2.06	28.74	0.00	2.19	14.51	59.48	21.30	14.19	7.08	2.02	3.76	14.25	6.81	14.59
10	ER1b	ExonRegion	1	85.72	14.24	13.48	2.73	37.46	51.35	25.82	5.19	3.71	9.18	103.41	0.00	4.69	75.52	171.17	87.68	64.37	31.41	20.70	19.15	47.38	27.09	69.01
11	ER1c	ExonRegion	1	77.50	19.07	68.31	9.07	24.90	32.86	23.93	22.32	17.05	26.57	153.34	16.38	28.75	85.63	137.01	96.65	131.14	57.47	28.91	29.49	95.85	48.48	81.48
12	E1a_E2a	KnownJunction	1	44.75	36.38	164.81	25.24	10.61	9.54	12.72	58.86	45.83	88.05	368.30	31.21	13.31	190.42	260.59	131.76	366.62	103.72	55.15	78.81	206.58	105.93	69.74
13	ER2a	ExonRegion	0	60.63	57.38	231.65	43.59	77.08	80.88	62.66	88.22	75.61	125.19	305.57	170.41	165.17	248.76	370.10	336.83	253.34	144.73	115.63	85.75	205.31	262.94	233.06
14	E2_Da	KnownBoundary	0	3.63	0.00	4.35	1.86	11.71	0.00	5.87	1.89	1.79	2.42	8.05	0.00	0.00	0.00	5.19	3.42	8.60	0.00	0.00	0.00	5.75	0.00	0.00
15	E2a_E3b	KnownJunction	0	0.00	0.00	8.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.93	0.00	0.00	0.00	0.00	0.00	0.00
16	E2a_E3d	KnownJunction	0	81.94	109.85	298.54	58.37	38.54	53.04	66.20	153.99	104.48	162.14	460.96	123.79	177.91	287.66	422.15	385.20	323.42	114.20	269.37	160.50	285.47	532.12	237.14
17	E2a_E5a	NovelJunction	0	0.00	0.00	7.89	2.06	0.00	0.00	3.53	2.34	0.00	1.64	4.05	0.00	0.00	9.89	4.45	7.35	8.42	0.00	3.76	0.00	2.35	2.76	0.00
18	ER2b	ExonRegion	0	3.94	0.79	4.76	1.71	3.95	2.86	1.79	1.41	2.65	1.27	1.26	0.00	5.51	1.32	5.63	3.01	3.72	2.33	1.24	0.41	1.13	0.00	2.86
19	E2_Db	NovelBoundary	0	187.07	147.08	259.42	292.94	161.12	112.55	119.02	222.29	253.73	163.11	40.33	62.27	59.25	80.58	82.58	230.62	106.03	350.65	130.17	171.30	64.43	74.70	197.44
20	ER3a	ExonRegion	0	11.63	6.48	5.15	4.14	6.68	5.24	3.92	5.59	2.51	2.81	1.66	4.56	4.17	2.78	8.99	6.46	2.89	1.71	2.45	3.25	1.94	2.08	4.04
21	E3_Ab	KnownBoundary	0	0.00	0.00	2.84	1.43	8.66	0.00	1.63	9.86	3.18	7.71	2.68	0.00	0.00	0.00	10.75	7.43	0.00	0.00	0.00	6.26	0.00	2.33	0.00
22	ER3b	ExonRegion	0	11.61	3.88	11.62	9.33	14.45	8.16	6.54	19.26	7.40	9.22	9.02	8.50	4.86	6.51	13.81	11.83	5.54	3.50	6.02	4.52	5.47	10.24	8.57
23	E3_Da	KnownBoundary	0	10.08	0.00	8.01	6.69	18.17	17.89	18.90	17.05	8.65	10.37	2.21	0.00	6.49	0.00	10.75	8.72	3.46	1.78	0.00	0.00	0.00	6.25	7.77
24	E3a_E3d	KnownJunction	0	16.82	0.00	10.38	3.43	6.96	5.45	13.65	4.44	4.57	1.67	6.79	6.30	0.00	4.59	4.45	11.54	4.77	0.00	0.00	5.75	2.29	2.69	4.18
25	ER3c	ExonRegion	0	30.58	16.65	19.68	17.78	27.59	18.08	17.65	21.48	16.26	18.43	6.26	11.21	8.50	8.89	17.99	20.40	14.14	22.34	10.07	15.89	7.22	6.15	16.59
26	E3_Ac	KnownBoundary	0	10.59	0.00	10.47	7.56	8.40	20.44	21.15	8.95	3.99	13.27	14.95	18.76	20.29	5.47	4.45	4.36	0.00	4.23	0.00	9.52	3.15	6.25	8.54
27	ER3d	ExonRegion	0	22.59	6.67	22.14	10.83	12.60	14.63	8.12	22.66	13.48	18.53	12.42	11.58	18.97	8.39	14.12	15.26	10.42	3.38	4.72	9.37	5.03	5.95	4.52
28	E3_Ad	KnownBoundary	0	34.67	6.64	8.01	11.52	14.69	15.62	11.13	22.51	12.44	18.29	17.90	18.91	21.10	4.94	10.26	4.36	4.30	4.19	14.40	6.07	0.00	0.00	4.35
29	ER3e	ExonRegion	0	152.56	100.80	320.89	67.58	75.57	62.44	70.96	150.88	108.52	176.23	469.89	217.96	163.58	317.28	390.23	301.09	366.73	130.67	143.57	113.17	285.30	338.46	187.86
30	E3_Db	NovelBoundary	1	6.08	9.14	9.76	8.66	56.20	29.59	19.56	30.56	5.56	10.18	0.00	0.00	18.34	2.18	5.69	4.02	8.79	0.00	0.00	11.57	0.00	0.00	10.33
31	E3b_E4a	KnownJunction	0	3.78	5.46	6.03	3.03	3.48	5.79	1.68	0.00	3.10	1.58	4.69	6.30	6.82	7.18	0.00	8.29	0.00	0.00	0.00	3.20	0.00	2.94	4.10
32	E3b_E4b	KnownJunction	0	241.75	115.24	289.58	51.28	110.36	64.79	84.09	126.84	92.68	148.92	379.94	182.16	212.32	304.37	420.30	313.93	233.57	78.84	112.19	69.09	228.70	310.03	161.68
33	Ix_AR1	ActiveIntronRegion	0	10.70	8.41	1.68	0.93	15.98	26.12	8.52	8.28	3.38	2.36	1.78	3.28	8.87	1.14	10.04	10.92	6.07	1.27	0.00	1.96	1.01	0.00	1.35
34	Ix_SR1	SilentIntronRegion	0	7.74	11.18	2.49	5.60	36.91	17.69	10.91	4.69	3.38	1.53	0.00	8.54	1.77	3.51	6.30	4.10	1.52	0.85	1.46	2.88	2.03	0.96	5.40
35	E4_Aa	NovelBoundary	0	47.27	2.50	5.03	7.79	7.56	31.29	9.05	13.76	4.20	6.47	0.00	0.00	6.66	0.00	4.45	19.23	7.67	9.58	0.00	2.49	3.09	2.51	3.16
36	ER4a	ExonRegion	0	41.48	12.28	21.82	14.26	26.01	27.34	11.09	24.26	7.64	14.88	9.39	2.43	7.21	9.47	9.17	15.15	11.38	8.20	2.32	5.72	6.41	7.43	7.81
37	E4_Ab	KnownBoundary	0	51.19	23.94	20.02	17.01	50.08	67.86	22.74	29.37	6.19	20.20	7.58	0.00	6.82	9.89	17.80	11.71	8.32	11.69	0.00	8.50	3.15	2.51	3.41
38	ER4b	ExonRegion	0	258.10	105.40	342.49	91.09	109.56	88.88	97.62	162.61	114.69	169.91	399.10	272.25	316.34	302.57	449.59	443.03	318.46	157.31	175.63	111.10	233.34	418.58	316.05
39	E4_Da	KnownBoundary	0	156.32	83.60	316.37	78.15	64.43	77.46	88.99	121.37	68.84	145.46	263.44	167.15	167.36	260.35	319.55	185.17	189.34	102.18	118.03	106.87	186.69	213.58	173.37
40	ER4c	ExonRegion	0	136.70	83.50	257.47	58.52	59.18	49.30	71.96	111.23	69.60	127.44	247.52	127.08	120.01	242.47	326.82	172.03	210.09	106.63	87.69	91.11	176.94	193.28	162.72
41	E4_Db	NovelBoundary	0	16.23	2.43	11.95	12.49	18.51	5.74	4.50	12.20	4.89	12.52	2.47	5.40	0.00	4.83	0.00	4.10	27.77	13.97	8.00	14.83	0.00	0.00	3.24
42	E4b_E5a	KnownJunction	0	205.67	88.93	227.02	59.00	75.47	20.95	94.33	131.35	76.82	137.96	264.01	256.43	146.91	316.03	336.98	285.82	258.16	90.00	79.06	107.51	224.38	245.42	202.14
43	ER4d	ExonRegion	0	148.56	82.36	236.73	56.30	59.79	27.37	67.32	112.22	71.97	134.41	248.38	182.00	111.48	253.74	316.79	211.59	215.07	91.68	62.36	98.28	198.50	199.70	178.34
44	Ix	Intron	0	22.74	8.43	10.59	9.17	23.68	18.25	10.31	11.82	5.81	6.89	3.12	8.71	22.72	3.87	7.31	6.66	6.06	2.91	2.57	4.37	1.61	4.50	5.50
45	Ix_AR1	ActiveIntronRegion	0	29.85	5.85	7.54	10.14	27.94	22.30	13.15	10.56	5.40	5.64	3.74	8.82	10.72	3.81	6.53	5.94	5.51	0.69	5.57	4.55	1.64	0.00	2.66
46	Ix_SR1	SilentIntronRegion	0	23.80	8.99	11.97	9.88	24.52	18.94	10.39	13.16	6.24	7.48	3.14	8.95	25.68	4.12	7.71	6.92	6.21	3.40	2.49	4.65	1.68	5.43	5.98
47	E5_Aa	NovelBoundary	0	20.97	14.47	8.99	7.13	23.34	27.43	22.04	16.02	5.96	5.69	10.00	7.65	13.15	7.42	13.60	8.54	0.00	3.98	0.00	0.00	5.56	6.12	4.35
48	ER5a	ExonRegion	0	89.44	58.80	187.09	47.58	50.69	47.70	56.64	73.42	58.11	94.68	152.66	112.75	95.05	199.25	318.52	155.12	144.41	74.21	74.44	63.37	121.16	162.06	111.42
49	E5_Da	KnownBoundary	0	132.69	63.02	177.31	42.98	40.32	33.79	85.68	66.29	55.24	74.68	150.67	60.47	67.53	153.69	269.11	173.80	142.68	59.65	100.80	52.73	87.23	126.81	100.05
50	E5_Db	KnownBoundary	0	6.89	3.22	1.80	3.43	0.00	2.44	6.36	4.85	0.00	1.58	2.63	0.00	0.00	4.83	0.00	4.36	0.00	4.35	7.91	0.00	0.00	2.82	3.50
51	E5b_E6a	KnownJunction	0	137.28	54.99	171.87	63.63	43.21	12.04	39.57	77.96	63.74	68.20	156.46	60.17	39.28	251.46	330.80	180.89	173.73	63.92	99.96	52.86	180.20	139.55	85.62
52	ER5b	ExonRegion	0	105.59	55.51	169.33	49.16	40.93	19.02	63.55	70.74	57.91	77.73	163.72	46.34	71.91	219.20	321.61	171.94	170.79	72.47	100.16	56.58	146.10	132.73	99.08
53	ER5c	ExonRegion	0	4.07	0.44	1.80	3.64	2.09	1.75	3.66	7.05	1.27	1.79	0.00	0.00	4.03	6.42	2.54	7.38	2.58	2.66	2.19	1.36	0.93	1.17	2.66
54	E5_Dc	KnownBoundary	0	17.86	0.00	1.27	4.99	4.16	11.13	4.42	4.03	1.79	2.95	0.00	0.00	13.47	2.47	9.64	7.78	4.77	4.39	0.00	2.81	3.15	0.00	4.01
55	ER5d	ExonRegion	0	27.65	9.66	17.73	9.61	18.87	17.49	14.10	26.23	10.37	16.09	10.34	12.12	11.89	10.57	14.16	12.26	9.91	9.97	3.66	9.07	2.70	3.54	6.12
56	E5_Dd	NovelBoundary	0	123.95	17.30	70.34	37.06	62.48	25.84	43.28	49.54	33.19	41.34	21.58	26.26	40.58	22.07	26.45	38.54	21.41	32.62	12.05	22.75	0.00	12.98	15.28
57	Ix	Intron	0	57.72	31.59	29.93	18.63	37.63	35.66	31.58	34.34	17.56	23.83	22.45	26.79	22.20	28.92	29.76	25.08	12.11	18.43	9.35	22.38	2.70	4.59	9.70
58	Ix_AR1	ActiveIntronRegion	0	58.00	31.72	30.07	18.72	37.80	35.82	31.72	34.50	17.64	23.93	22.56	26.92	22.31	29.05	29.91	25.20	12.17	18.51	9.39	22.49	2.71	4.61	9.74
59	E6_Aa	NovelBoundary	0	69.94	51.31	58.28	29.33	40.24	67.29	39.44	26.53	22.68	36.08	32.48	17.86	26.46	39.08	36.34	16.32	17.58	33.20	16.47	20.20	3.15	2.51	7.60
60	ER6a	ExonRegion	0	135.16	63.74	137.09	49.05	67.27	71.12	58.20	80.02	64.49	75.01	158.61	57.88	61.66	135.51	251.58	136.15	116.58	65.96	81.06	63.15	95.05	130.00	58.66