Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-460N11.2 Gene 0 1.65 1.36 0.29 0.76 0.75 3.28 1.69 0.44 2.69 0.59 0.06 0.36 1.79 0.30 1.73 0.93 8.28 0.32 0.60 1.36 0.55 0.75 0.55 2 455242 Transcript 0 1.04 0.70 0.13 0.24 0.23 0.78 0.53 0.09 0.63 0.16 0.08 0.46 0.99 0.42 1.82 0.97 5.19 0.45 0.67 0.97 0.35 0.16 0.74 3 356190 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 IG7_SR5 SilentIntergenicRegion 0 2.14 3.90 0.00 0.52 0.00 1.85 0.24 0.00 0.78 0.00 0.27 1.31 1.93 0.00 0.51 1.67 12.09 0.00 0.88 0.52 0.00 0.00 0.00 5 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.53 0.00 0.00 0.00 0.00 0.00 0.00 3.92 0.00 1.71 2.48 11.04 0.00 0.00 1.78 0.00 0.00 0.00 6 E1_Da NovelBoundary 0 7.19 0.00 0.00 7.69 0.00 0.00 8.04 2.34 5.90 5.16 0.00 6.00 0.00 0.00 0.00 8.12 26.74 10.78 0.00 19.94 2.47 0.00 0.00 7 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E2_Aa NovelBoundary 0 7.04 0.00 0.00 0.00 8.66 2.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.90 1.66 0.00 3.07 0.00 0.00 3.59 9 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.94 1.02 0.04 0.00 12.56 0.00 0.00 0.00 0.00 0.00 0.00 10 E2_Da NovelBoundary 0 0.00 0.00 1.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.38 4.27 9.54 0.00 0.00 3.07 0.00 0.00 0.00 11 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 I2 Intron 0 1.03 1.11 1.44 0.99 1.14 2.68 1.53 0.00 2.01 0.73 0.59 1.15 5.32 0.36 1.44 1.99 17.28 0.45 0.58 2.72 0.00 0.51 0.18 13 I2_SR1 SilentIntronRegion 0 1.03 1.12 1.45 0.99 1.14 2.68 1.53 0.00 2.01 0.73 0.59 1.15 5.33 0.36 1.45 1.99 17.29 0.45 0.58 2.73 0.00 0.51 0.18 14 E3_Aa NovelBoundary 0 497.27 501.42 285.94 400.55 677.50 361.33 725.64 378.91 294.82 272.30 198.16 108.64 123.37 117.25 106.81 450.57 362.51 404.67 343.45 510.31 381.04 301.70 544.62 15 ER3a ExonRegion 0 7.47 2.46 0.72 0.80 1.05 0.00 2.60 0.00 0.72 0.67 0.76 4.20 0.00 1.50 14.10 5.83 6.50 2.17 2.55 5.84 2.59 0.00 6.91 16 E3_Da NovelBoundary 0 6.22 6.25 2.54 1.93 0.00 2.38 1.72 2.55 0.00 3.09 0.00 0.00 0.00 2.47 0.00 16.06 14.21 5.84 0.00 2.81 0.00 0.00 0.00 17 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 I3_AR1 ActiveIntronRegion 0 1.74 1.60 0.00 0.62 1.63 1.22 0.66 0.80 0.61 0.00 0.32 1.78 3.61 0.22 1.93 0.00 20.38 0.00 0.00 0.73 1.15 0.00 0.49 19 I3_SR2 SilentIntronRegion 0 2.32 0.00 0.00 0.17 1.44 0.00 0.00 0.18 0.99 0.00 1.04 1.91 2.07 0.00 0.00 0.00 14.14 0.00 0.00 1.08 0.00 0.00 1.58 20 E4_Aa NovelBoundary 0 0.00 3.22 0.00 0.00 0.00 0.00 6.54 0.00 0.00 1.67 0.00 0.00 0.00 0.00 5.56 0.00 31.14 0.00 4.05 5.31 0.00 3.06 0.00 21 ER4a ExonRegion 0 0.00 1.95 0.00 0.00 0.00 0.00 0.03 0.00 0.00 0.00 0.00 0.00 0.00 1.39 0.00 0.00 6.60 1.85 3.19 0.00 0.00 0.00 0.00 22 E4_Da NovelBoundary 0 24.30 16.31 0.00 0.00 0.00 0.00 2.12 0.00 4.43 0.00 0.00 0.00 8.28 0.00 0.00 0.00 13.65 4.48 0.00 18.92 5.81 11.57 0.00 23 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER5a ExonRegion 0 2.48 1.66 0.54 1.06 1.05 5.50 0.69 0.44 5.28 0.95 0.06 0.40 3.01 0.21 2.25 1.36 13.37 0.30 0.83 1.88 0.93 1.43 0.48 25 E5_Ab KnownBoundary 0 2.89 3.35 6.98 10.52 12.82 28.62 35.37 17.66 7.99 13.30 0.00 0.00 0.00 0.00 0.00 0.00 15.90 3.73 4.80 24.67 0.00 0.00 0.00 26 ER5b ExonRegion 0 0.00 1.32 0.00 0.53 1.61 4.76 7.18 0.93 0.37 1.36 0.00 0.00 2.73 0.81 0.41 0.00 5.38 0.00 0.00 1.66 0.00 0.00 0.59 27 E5_Da KnownBoundary 0 3.78 10.59 9.55 17.98 46.26 39.58 52.07 11.46 25.72 16.25 5.37 6.00 32.14 7.06 0.00 8.72 27.02 4.39 7.34 48.45 0.00 5.57 0.00 28 ER5c ExonRegion 0 0.47 0.97 0.00 0.51 0.24 0.73 2.00 0.46 0.33 0.00 0.00 0.00 0.02 0.12 0.09 0.00 1.87 0.16 0.14 0.19 0.00 0.18 0.00