Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FXN Gene 0 30.42 20.71 24.49 10.92 15.07 9.17 17.22 11.70 12.53 8.35 85.24 31.53 31.16 55.24 66.94 46.37 40.02 18.65 26.88 21.15 27.30 27.44 22.15 2 377270 Transcript 0 7.74 7.22 6.87 4.95 6.98 3.12 8.48 3.91 5.97 4.23 7.82 11.18 12.28 7.46 10.74 9.13 6.53 6.56 8.54 9.86 5.36 4.47 9.02 3 396364 Transcript 0 0.64 0.00 0.00 0.00 0.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.29 0.08 0.00 0.00 0.00 0.00 0.26 4 396366 Transcript 1 17.86 0.00 11.21 3.86 0.00 2.10 7.86 1.85 9.29 1.58 39.64 0.00 0.00 23.78 31.40 11.79 11.59 12.27 7.34 6.20 18.84 14.63 0.00 5 498653 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.18 0.00 0.00 0.12 0.00 0.00 0.00 6 484259 Transcript 0 0.00 2.89 7.69 3.66 0.00 0.00 0.00 0.00 2.72 0.00 2.68 0.00 0.00 0.00 11.87 0.00 0.00 0.00 9.41 0.00 2.41 3.12 3.33 7 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER1b ExonRegion 0 0.22 0.26 0.00 0.00 0.02 0.37 0.09 0.00 0.01 0.00 1.01 0.00 0.00 0.21 1.45 0.53 0.21 0.16 0.15 0.00 0.19 0.02 0.12 10 E1_Ac KnownBoundary 0 2.89 5.79 0.00 0.00 0.00 2.44 0.00 0.00 0.00 0.00 22.53 0.00 0.00 4.65 22.62 9.91 3.65 3.48 4.05 0.00 0.00 0.00 0.00 11 ER1c ExonRegion 1 26.90 17.88 9.13 2.30 5.83 9.44 15.89 1.21 4.83 1.74 83.32 4.61 5.10 41.43 42.81 33.08 38.47 10.54 18.44 8.92 28.83 17.41 18.76 12 E1a_E3a KnownJunction 1 20.82 2.89 34.12 14.52 0.00 0.00 0.00 10.60 12.44 8.57 169.36 20.11 6.49 106.66 113.11 83.40 95.93 12.15 13.37 24.80 42.63 25.90 12.38 13 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.37 0.00 0.00 0.24 0.00 0.00 0.00 14 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 I2_AR2 ActiveIntronRegion 0 9.86 5.19 5.55 3.62 1.76 0.00 1.78 4.28 2.15 0.91 1.73 2.16 4.07 0.00 6.80 1.80 0.00 5.35 15.68 2.02 3.65 0.00 3.48 16 E3_Ab NovelBoundary 1 19.93 10.79 42.84 16.35 4.16 4.77 5.48 12.53 13.14 13.97 139.14 6.00 19.64 108.19 101.12 75.79 77.98 27.40 54.21 55.48 42.44 53.89 33.97 17 ER3a ExonRegion 1 17.67 5.22 37.99 16.89 3.14 1.91 0.92 8.79 14.39 11.22 174.38 13.18 8.56 118.07 116.55 91.88 93.72 20.57 31.16 40.89 47.62 42.58 24.39 18 ER3b ExonRegion 0 25.91 19.79 55.83 20.19 11.74 4.62 5.23 18.39 21.36 21.00 196.12 46.59 42.46 137.29 143.59 118.21 73.50 45.09 65.53 38.58 52.77 86.04 47.57 19 E3a_E4a KnownJunction 0 48.38 36.44 69.66 19.71 4.16 10.68 16.34 48.34 34.35 19.96 175.36 31.96 26.13 113.07 155.39 72.97 51.99 51.19 33.79 50.17 46.39 56.46 36.79 20 E3a_E5a KnownJunction 0 0.00 2.89 7.69 3.66 0.00 0.00 0.00 0.00 2.72 0.00 2.68 0.00 0.00 0.00 11.87 0.00 0.00 0.00 9.41 0.00 2.41 3.12 3.33 21 ER4a ExonRegion 1 76.37 51.63 68.40 20.13 24.28 20.82 30.10 35.57 31.10 21.61 272.00 76.28 43.72 162.12 171.13 118.81 109.34 46.99 45.15 64.11 89.73 61.54 35.22 22 E4_Da NovelBoundary 0 24.60 0.00 0.00 2.06 8.49 0.00 4.11 0.00 3.47 0.00 0.00 0.00 0.00 0.00 0.00 8.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 E4a_E5a KnownJunction 1 188.26 82.75 83.94 33.00 28.01 18.46 22.96 58.00 33.45 29.06 341.67 101.28 39.12 184.65 162.56 134.58 69.10 53.02 103.91 76.96 93.28 101.77 31.33 24 ER5a ExonRegion 0 129.84 82.38 84.63 37.33 23.43 22.77 33.64 43.78 36.79 23.84 365.55 80.05 73.51 193.15 252.17 146.54 149.89 59.03 89.61 70.45 116.66 100.48 41.71 25 E5_Da NovelBoundary 0 19.04 0.00 2.25 1.30 0.00 2.21 4.20 1.68 5.61 5.91 10.84 6.30 12.17 15.42 14.09 13.07 15.90 6.47 16.09 9.33 12.66 6.67 3.50 26 E5a_E7a KnownJunction 1 121.13 42.36 77.02 28.30 43.89 29.81 60.41 36.39 27.98 16.28 357.93 101.58 93.34 170.11 308.43 84.34 185.97 50.95 82.07 58.68 139.43 61.48 13.06 27 E5b_E7a KnownJunction 0 17.86 0.00 11.21 3.86 0.00 2.10 7.86 1.85 9.29 1.58 39.64 0.00 0.00 23.78 31.40 11.79 11.59 12.27 7.34 6.20 18.84 14.63 0.00 28 ER5b ExonRegion 1 15.34 2.80 8.88 2.90 2.68 1.83 5.13 2.59 9.57 1.15 41.32 0.00 4.69 31.47 29.01 15.98 14.85 15.47 9.56 4.79 21.76 12.50 4.77 29 ER6a ExonRegion 0 0.64 0.00 0.00 0.00 0.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.29 0.08 0.00 0.00 0.00 0.00 0.26 30 ER7a ExonRegion 0 61.36 37.96 81.85 31.02 35.97 24.65 37.87 38.07 28.52 14.87 324.61 104.09 84.70 207.97 261.96 177.25 150.49 60.05 89.95 44.19 94.88 102.57 65.02 31 E7_Da KnownBoundary 0 55.94 46.37 101.00 38.79 38.79 24.42 41.20 49.45 33.25 20.84 310.82 89.13 64.44 161.99 223.01 152.27 128.38 51.78 92.71 32.34 107.86 67.66 60.10 32 ER7b ExonRegion 0 82.23 48.90 47.72 13.39 39.34 20.70 35.36 17.96 16.61 11.18 191.37 62.32 64.42 126.23 155.38 104.73 86.63 27.57 50.82 23.15 45.47 67.30 43.66 33 E7_Db KnownBoundary 0 104.54 43.87 36.90 11.02 30.56 30.15 30.52 19.43 7.78 11.93 127.72 42.76 33.76 53.98 67.99 56.99 49.37 9.74 9.41 40.14 11.98 20.51 23.05 34 ER7c ExonRegion 1 60.77 26.24 14.50 13.55 25.63 17.06 24.85 14.74 13.14 7.66 55.66 57.85 112.62 62.48 74.17 19.48 31.34 8.75 20.11 15.64 7.91 18.22 18.40 35 E7_Dc KnownBoundary 0 23.41 12.10 8.57 17.25 12.65 0.00 18.77 8.79 9.29 4.35 16.48 38.86 40.09 16.95 17.80 8.72 18.23 8.04 4.80 24.42 2.84 7.96 13.06 36 ER7d ExonRegion 0 15.49 14.44 13.73 9.91 13.97 6.24 16.96 7.82 11.93 8.46 15.64 22.35 24.56 14.91 20.00 18.26 13.06 13.11 17.08 19.73 10.71 8.94 18.05 37 IG40_AR1 ActiveIntergenicRegion 0 7.23 8.91 9.02 6.81 8.74 1.68 9.86 5.17 8.14 3.93 7.73 15.68 13.29 4.66 5.93 2.73 3.57 4.50 13.67 8.94 1.57 8.63 4.64 38 IG40_SR2 SilentIntergenicRegion 0 3.90 5.17 6.81 4.70 6.29 1.48 6.95 2.45 5.46 2.47 3.26 7.55 2.76 3.88 4.14 3.58 0.00 4.13 14.52 4.37 1.85 4.38 9.67 39 IG40_AR3 ActiveIntergenicRegion 0 19.96 15.80 15.93 6.41 6.78 2.26 8.55 9.16 7.36 4.34 7.54 17.10 16.28 5.79 5.86 9.44 6.35 12.08 8.76 10.67 4.77 5.83 14.42