Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C9orf61 Gene 0 29.42 1.05 1.95 1.27 5.44 4.49 12.90 9.89 8.68 1.16 0.05 0.00 0.05 0.00 0.12 0.07 0.08 0.03 0.08 0.35 0.06 0.55 0.44 2 455972 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 1.44 0.10 1.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 457148 Transcript 0 7.66 0.00 0.59 0.00 8.29 0.44 2.75 0.31 1.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.88 0.00 4 377218 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 257515 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 303068 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.33 0.00 0.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 377225 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 460871 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 469179 Transcript 0 10.20 0.40 0.44 0.37 3.26 2.69 6.88 4.64 8.89 0.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 0.00 0.06 0.18 10 377216 Transcript 0 49.13 1.67 1.18 1.35 9.65 3.89 15.71 9.56 4.31 0.03 0.01 0.00 0.83 0.00 0.00 0.00 0.00 0.00 0.00 1.45 0.00 0.00 0.44 11 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.63 0.21 0.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.25 0.00 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER2a ExonRegion 0 0.58 0.00 0.00 0.00 0.36 0.00 0.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 14 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER3a ExonRegion 0 3.01 0.00 2.09 0.00 0.00 0.16 8.87 2.58 2.60 0.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.83 0.00 16 E3a_E5a KnownJunction 0 6.59 0.00 6.24 0.00 0.00 0.00 23.76 4.19 3.91 1.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 1.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER4b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E4b_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER4c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER5a ExonRegion 0 11.25 1.94 3.31 0.93 3.69 2.73 7.40 6.34 8.60 0.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.15 1.03 22 E5a_E6a KnownJunction 0 5.93 0.00 5.47 0.00 0.00 5.45 3.58 15.90 13.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.39 3.59 23 ER6a ExonRegion 0 8.42 1.99 4.65 1.08 0.00 8.67 9.71 10.91 13.79 1.15 0.00 0.00 0.00 0.00 2.18 0.00 0.00 0.00 0.00 0.00 0.00 1.87 0.73 24 E6_Ab KnownBoundary 0 12.00 0.00 6.42 2.06 0.00 12.21 19.70 4.27 18.20 1.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER6b ExonRegion 0 16.88 0.00 3.66 0.64 0.00 6.75 11.47 10.07 14.39 0.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.54 26 E6_Da NovelBoundary 0 0.00 0.00 0.00 2.06 0.00 0.00 20.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 E6a_E7a KnownJunction 0 20.97 0.00 1.36 0.00 0.00 5.34 19.25 11.42 15.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.93 28 ER7a ExonRegion 0 12.68 1.88 3.63 0.80 0.40 3.99 17.49 8.82 15.23 0.00 0.00 0.00 0.00 0.00 0.97 0.00 0.00 0.00 0.00 0.00 0.00 1.97 0.98 29 E7a_E8a KnownJunction 0 34.23 5.53 0.00 1.47 3.99 8.46 16.25 6.78 6.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 ER8a ExonRegion 0 12.07 0.80 1.38 1.65 3.10 9.07 18.75 10.02 13.39 0.64 0.00 0.00 0.00 0.00 0.00 1.11 0.00 0.00 0.00 0.00 0.00 2.33 0.00 31 E8a_E9a KnownJunction 0 28.67 0.00 0.00 1.60 4.16 0.00 7.33 7.11 1.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.25 0.00 32 ER9a ExonRegion 0 16.95 0.05 1.41 0.37 2.26 6.23 11.29 8.30 9.01 0.39 0.00 0.00 0.00 0.00 0.00 1.19 0.00 0.00 0.00 0.00 0.00 1.68 0.00 33 E9a_E10a KnownJunction 0 20.97 0.00 0.00 2.06 7.47 0.00 23.41 7.43 7.35 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER10a ExonRegion 0 17.12 2.55 2.11 1.71 6.13 6.48 17.93 9.36 10.71 0.54 0.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.29 1.90 35 E10a_E11a KnownJunction 0 28.23 0.00 4.52 1.73 12.82 13.29 19.12 6.61 18.11 0.00 2.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 E11_Ab NovelBoundary 0 19.34 0.00 5.14 0.00 11.38 0.00 22.70 6.24 9.17 1.56 2.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 ER11a ExonRegion 0 19.78 0.55 3.77 1.10 10.91 5.85 21.29 8.71 12.02 1.15 1.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.16 0.00 38 ER11b ExonRegion 0 17.48 0.70 2.10 1.22 4.38 8.61 22.10 5.36 8.52 0.42 0.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.88 0.10 0.30 39 E11_Da KnownBoundary 0 31.86 0.00 1.63 0.00 7.64 4.20 8.17 1.56 2.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 3.40 4.54 4.33 0.00 4.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 E11a_E13b KnownJunction 0 0.00 0.00 0.00 1.96 0.00 5.05 10.78 1.60 0.00 0.00 2.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.76 42 E11a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 ER11c ExonRegion 0 7.66 0.00 0.59 0.00 8.29 0.44 2.75 0.31 1.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.88 0.00 44 E11_Db NovelBoundary 0 13.56 0.00 0.00 0.00 4.16 7.44 14.66 9.08 1.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 I11 Intron 0 12.26 0.62 1.67 0.21 6.25 2.05 8.07 6.55 2.25 0.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.64 0.00 46 I11_AR2 ActiveIntronRegion 0 15.73 0.89 1.87 0.30 8.59 2.40 8.68 8.65 2.69 1.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.91 0.00 47 E12_Aa NovelBoundary 0 24.08 2.83 0.00 0.00 12.73 2.33 31.22 9.82 8.07 1.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.12 0.00 48 ER12a ExonRegion 0 27.73 1.20 1.32 1.10 6.39 3.51 14.31 10.39 10.90 2.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.10 0.00 0.19 0.53 49 E12_Da NovelBoundary 0 36.90 3.09 1.51 0.00 7.64 0.00 34.09 5.71 3.44 1.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50 E12a_E13b KnownJunction 0 2.89 0.00 0.00 0.00 0.00 0.00 1.99 3.53 11.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 I12 Intron 0 42.80 0.88 1.18 0.87 5.76 4.74 15.95 8.87 2.77 1.10 0.00 0.00 0.83 0.00 0.00 0.00 0.00 0.00 0.00 0.46 0.47 0.90 0.63 52 I12_SR1 SilentIntronRegion 0 43.16 0.88 1.19 0.88 5.81 4.78 16.09 8.94 2.80 1.11 0.00 0.00 0.84 0.00 0.00 0.00 0.00 0.00 0.00 0.46 0.48 0.90 0.64 53 E13_Aa NovelBoundary 0 122.69 5.53 3.78 3.66 7.39 2.90 26.63 14.42 8.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 54 ER13a ExonRegion 0 49.13 1.67 1.18 1.35 9.65 3.89 15.71 9.56 4.31 0.03 0.01 0.00 0.83 0.00 0.00 0.00 0.00 0.00 0.00 1.45 0.00 0.00 0.44 55 E13_Ab KnownBoundary 0 71.35 2.70 0.00 0.00 15.79 0.00 14.44 17.62 7.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.49 0.00 0.00 4.10 56 ER13b ExonRegion 0 70.97 2.10 3.45 1.75 9.65 7.69 19.03 19.38 12.75 2.34 0.23 0.00 0.00 0.00 0.00 0.00 1.15 0.48 0.00 0.31 0.38 0.00 1.05 57 E13a_E14a KnownJunction 0 146.84 6.45 2.19 3.23 4.24 5.79 32.95 20.41 5.61 1.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58 ER14a ExonRegion 0 61.10 3.08 5.42 1.86 4.59 9.59 14.55 13.90 4.71 1.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.36 0.00 59 E14_Da KnownBoundary 0 75.27 6.58 5.71 2.06 8.23 7.95 20.05 9.20 6.54 2.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.12 0.00 60 ER14b ExonRegion 0 48.59 0.83 2.96 2.72 8.44 6.10 15.66 15.86 10.63 1.32 0.00 0.00 0.00 0.00 0.40 0.00 0.00 0.00 0.44 1.17 0.00 0.94 0.40 61 ER14c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62 IG43_AR8 ActiveIntergenicRegion 0 11.59 75.85 63.85 38.44 33.49 75.30 24.65 107.39 251.43 90.11 2.57 0.00 0.00 10.41 0.91 0.00 4.91 32.77 11.97 19.47 50.32 54.59 30.78