Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C9orf40 Gene 0 24.03 26.79 16.85 24.57 27.79 27.13 18.86 30.71 17.15 31.99 74.13 59.45 21.65 92.89 63.56 41.17 39.07 15.79 3.42 22.76 7.05 13.06 7.02 2 376854 Transcript 0 19.73 22.83 16.36 17.32 21.22 27.61 14.18 22.95 14.20 28.86 78.27 31.36 13.10 108.80 60.04 54.04 47.26 23.78 3.62 22.16 11.83 7.67 9.32 3 ER1a ExonRegion 1 1.94 4.07 7.89 2.30 3.02 7.85 3.40 3.61 2.76 10.05 42.18 5.52 2.64 79.83 45.90 21.72 30.32 16.66 2.23 9.52 7.82 3.08 4.62 4 E1a_E2a KnownJunction 1 23.71 27.82 20.49 15.48 22.16 39.52 13.60 22.84 16.49 35.08 104.71 5.85 6.82 148.04 63.04 90.83 68.63 39.26 4.71 28.51 20.94 2.57 15.28 5 I1 Intron 0 10.03 5.02 3.66 4.36 8.14 8.36 6.04 5.67 3.42 3.30 17.84 17.98 6.67 20.34 9.12 12.33 10.10 5.10 0.97 5.06 1.22 2.57 2.00 6 I1_SR1 SilentIntronRegion 0 4.90 2.25 2.50 2.67 3.10 3.47 3.28 5.15 3.00 1.89 13.43 9.02 4.09 21.48 6.40 10.32 9.73 7.35 0.84 4.14 2.08 2.08 2.32 7 I1_AR1 ActiveIntronRegion 1 25.40 0.00 0.00 0.00 0.00 0.00 21.18 1.73 0.00 0.00 11.60 82.26 0.00 9.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 I1_AR2 ActiveIntronRegion 1 8.94 3.60 6.61 4.80 7.72 8.36 6.18 7.30 3.87 3.36 25.11 26.57 6.71 20.88 10.56 15.66 14.75 7.10 2.15 5.56 2.15 2.62 1.97 9 I1_SR2 SilentIntronRegion 0 11.28 5.83 4.44 4.52 8.63 8.55 7.42 7.29 2.41 5.85 22.17 24.94 9.73 22.75 12.37 16.01 10.58 0.32 0.52 9.17 0.00 2.48 0.48 10 I1_AR3 ActiveIntronRegion 0 12.82 7.72 2.90 5.91 14.16 13.05 9.68 4.47 4.01 4.58 17.23 18.93 7.80 19.11 10.32 12.68 7.84 3.24 0.49 3.58 0.00 2.58 2.93 11 I1_SR3 SilentIntronRegion 0 25.89 12.44 0.97 5.65 12.97 15.74 4.83 4.39 3.66 2.00 11.07 18.08 10.34 14.54 8.69 5.04 3.82 1.55 0.00 6.42 0.00 4.72 0.00 12 E2_Aa NovelBoundary 1 23.86 3.35 8.16 16.35 17.06 2.73 9.01 6.61 6.45 8.81 11.69 48.17 0.00 23.78 9.64 4.36 13.09 9.04 0.00 3.26 0.00 0.00 0.00 13 ER2a ExonRegion 0 33.55 36.58 20.71 34.16 38.48 35.45 25.53 42.39 23.35 41.45 87.91 82.70 29.84 98.52 71.17 49.55 42.84 15.42 3.93 28.46 6.72 17.36 8.05