Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-405L18.3 Gene 0 21.64 52.16 76.23 30.00 29.79 31.97 46.07 27.85 19.90 48.94 57.36 39.22 30.59 59.47 62.84 50.37 52.19 69.43 32.36 48.42 33.83 20.56 28.89 2 434871 Transcript 0 8.13 19.61 30.18 11.80 11.20 12.30 17.66 10.54 7.95 19.10 23.33 15.83 12.27 24.30 27.41 21.05 21.85 29.72 13.16 20.08 13.85 8.06 11.89 3 ER1a ExonRegion 0 0.00 0.00 0.08 0.03 0.10 0.05 0.05 0.06 0.03 0.00 0.07 0.00 0.00 0.08 0.14 0.07 0.00 0.00 0.00 0.00 0.03 0.13 0.00 4 E1_Da NovelBoundary 1 41.93 131.42 30.04 13.25 24.96 7.89 36.52 8.13 7.47 26.08 136.03 42.61 52.43 35.02 125.84 101.77 141.19 81.50 50.26 95.81 101.19 28.47 26.55 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 Ix Intron 0 3.58 1.72 2.51 3.43 2.83 2.32 4.33 4.90 2.92 3.43 3.27 2.96 19.67 1.13 3.62 5.34 3.14 0.58 1.01 3.82 0.70 2.86 3.41 7 Ix_AR1 ActiveIntronRegion 0 3.35 1.48 4.30 6.81 4.20 3.49 3.96 6.53 5.01 7.16 7.12 6.78 37.43 2.60 4.00 10.84 3.01 1.24 1.07 4.89 1.00 4.75 3.98 8 I1 Intron 1 8.86 11.61 32.67 7.73 13.24 11.52 12.36 9.31 6.30 17.89 31.63 23.39 15.31 37.20 43.10 37.89 43.34 39.87 27.28 25.51 23.47 11.50 17.32 9 I1_SR1 SilentIntronRegion 1 8.89 11.65 32.79 7.76 13.29 11.56 12.40 9.35 6.33 17.96 31.74 23.48 15.37 37.32 43.24 38.04 43.51 40.02 27.38 25.60 23.56 11.54 17.39 10 E2_Aa NovelBoundary 1 739.17 519.51 731.32 821.91 434.30 342.19 688.50 823.99 863.13 796.67 161.88 86.43 135.38 81.82 222.02 651.54 355.31 1213.34 705.62 671.45 311.91 314.56 586.87 11 ER2a ExonRegion 0 12.68 30.76 60.26 22.87 17.38 21.57 30.50 16.98 16.45 35.95 51.64 34.08 25.86 54.66 75.19 50.99 53.34 77.63 29.13 47.57 31.34 15.22 27.46 12 E2_Da NovelBoundary 0 22.97 46.37 76.11 31.16 10.61 22.15 30.12 20.41 15.31 59.34 39.38 17.86 6.33 59.69 49.57 69.81 87.42 126.85 24.85 41.74 51.34 31.47 35.00 13 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 I2 Intron 1 12.06 23.17 54.30 21.17 18.59 23.95 29.81 18.62 17.14 40.85 48.89 25.80 20.74 57.23 64.53 47.91 47.25 66.75 32.31 43.46 31.54 10.71 20.81 15 I2_AR1 ActiveIntronRegion 1 11.14 24.78 60.67 22.18 17.12 24.89 30.76 19.88 18.10 41.70 48.76 22.08 22.66 54.32 63.81 46.53 46.83 71.92 33.71 46.51 34.58 10.32 20.42 16 I2_SR1 SilentIntronRegion 1 15.71 17.34 30.70 17.57 24.47 20.70 26.51 14.06 13.70 38.15 50.00 40.33 13.70 69.09 68.14 53.81 49.47 47.87 27.41 32.39 20.33 12.36 22.57 17 E3_Aa NovelBoundary 1 632.85 460.58 438.84 453.86 457.98 301.87 399.94 505.29 610.21 438.90 230.06 102.03 138.63 63.51 244.89 522.26 417.48 682.86 516.63 445.57 179.90 201.27 463.18 18 ER3a ExonRegion 0 27.97 67.30 90.59 36.08 38.54 39.87 57.76 35.64 23.28 59.55 64.96 45.05 35.51 66.78 61.71 54.17 55.88 70.95 36.66 52.83 37.87 24.95 31.99 19 IG11 Intergenic 0 11.65 47.86 91.69 28.42 21.60 29.89 28.11 36.72 19.78 54.65 49.85 15.90 14.74 52.22 59.64 41.28 44.12 76.88 35.06 41.60 39.38 20.97 19.86 20 IG11_AR1 ActiveIntergenicRegion 0 11.65 47.86 91.69 28.42 21.60 29.89 28.11 36.72 19.78 54.65 49.85 15.90 14.74 52.22 59.64 41.28 44.12 76.88 35.06 41.60 39.38 20.97 19.86