Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C9orf122 Gene 0 1.26 14.48 26.26 5.41 3.90 0.56 4.28 7.21 9.91 13.84 0.00 0.72 1.63 1.62 1.22 0.12 0.18 4.99 7.30 21.61 0.00 0.28 0.16 2 471864 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.44 0.05 0.00 0.00 0.00 0.00 0.93 0.00 0.00 0.00 3 484285 Transcript 0 0.00 0.90 6.58 0.54 2.10 0.00 0.82 1.36 4.08 5.24 0.00 0.00 0.00 0.35 0.00 0.00 0.00 2.61 1.69 10.19 0.00 0.00 0.00 4 377680 Transcript 0 0.67 7.67 15.32 2.54 1.78 0.35 2.49 4.90 5.65 7.83 0.00 0.37 0.75 1.00 0.71 0.06 0.09 3.15 5.03 13.43 0.00 0.09 0.08 5 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.40 0.10 0.00 0.00 0.00 0.00 1.86 0.00 0.00 0.00 6 E1_Da NovelBoundary 0 0.00 6.38 10.85 0.00 0.00 0.00 2.21 2.05 4.40 8.14 0.00 0.00 0.00 4.94 0.00 0.00 0.00 7.54 0.00 18.28 0.00 0.00 0.00 7 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E2_Aa NovelBoundary 0 0.00 5.79 6.50 12.19 3.14 2.10 0.00 5.42 10.01 13.08 0.00 0.00 0.00 5.36 0.00 0.00 0.00 14.80 0.00 5.11 0.00 0.00 0.00 9 ER2a ExonRegion 0 0.00 1.81 10.29 1.08 0.47 0.00 1.64 2.73 6.36 8.95 0.00 0.00 0.00 0.71 0.00 0.00 0.00 5.23 3.37 20.38 0.00 0.00 0.00 10 E2_Da NovelBoundary 0 0.00 5.92 13.42 3.53 0.00 0.00 4.24 11.01 19.91 10.50 0.00 0.00 0.00 0.00 4.45 0.00 0.00 11.03 0.00 17.83 0.00 0.00 0.00 11 E2a_E4a KnownJunction 0 0.00 0.00 2.87 0.00 3.74 0.00 0.00 0.00 1.79 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E3_Aa NovelBoundary 0 0.00 11.58 44.14 10.89 0.00 11.13 0.00 17.95 22.60 27.16 10.21 0.00 0.00 6.00 0.00 4.36 0.00 88.09 32.66 62.64 0.00 0.00 0.00 13 ER3a ExonRegion 0 0.39 4.10 16.94 0.75 0.00 0.34 2.19 5.09 7.08 9.09 0.00 0.00 0.00 1.47 1.13 0.00 0.00 7.24 7.60 21.48 0.00 0.00 0.00 14 E3_Da NovelBoundary 0 0.00 19.60 26.55 27.94 11.29 9.82 3.84 2.38 12.36 11.85 7.53 0.00 0.00 9.36 4.45 0.00 3.46 68.77 11.39 69.99 4.82 0.00 0.00 15 E3a_E4a KnownJunction 0 0.00 0.00 1.54 0.00 0.00 0.00 0.00 1.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 I3 Intron 0 0.00 3.56 15.79 0.67 0.88 0.80 1.01 1.69 5.44 11.60 0.00 0.00 0.00 1.20 1.12 0.00 0.00 4.93 6.97 11.64 0.00 0.23 0.00 17 I3_SR1 SilentIntronRegion 0 0.00 3.61 14.94 0.61 0.51 0.77 1.05 1.67 4.18 9.23 0.00 0.00 0.00 2.05 1.15 0.00 0.00 4.91 6.83 11.29 0.00 0.00 0.00 18 I3_AR1 ActiveIntronRegion 0 0.00 3.52 17.16 0.75 1.41 0.86 0.98 1.75 7.30 15.09 0.00 0.00 0.00 0.00 1.09 0.00 0.00 5.00 7.25 12.26 0.00 0.56 0.00 19 E4_Aa NovelBoundary 0 0.00 5.72 31.22 3.53 0.00 0.00 4.50 2.55 11.02 13.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.16 4.61 20.96 0.00 0.00 0.00 20 ER4a ExonRegion 0 0.22 9.20 36.43 5.65 1.36 0.46 3.07 9.30 14.20 18.50 0.00 0.00 0.39 3.00 2.58 0.00 0.00 16.92 10.17 37.59 0.00 0.64 0.00 21 E4_Da KnownBoundary 0 0.00 3.35 57.89 3.60 0.00 2.84 3.75 16.72 23.55 24.20 0.00 0.00 0.00 2.47 4.45 0.00 0.00 27.28 22.02 28.12 0.00 0.00 0.00 22 ER4b ExonRegion 0 4.03 12.84 43.10 0.74 5.09 0.38 3.76 11.80 17.19 18.98 0.00 0.00 3.12 1.36 3.88 0.00 0.00 12.08 7.65 35.28 0.00 0.67 0.00 23 E4_Db KnownBoundary 0 0.00 15.26 38.50 7.19 0.00 0.00 3.89 19.96 15.08 20.90 0.00 0.00 0.00 2.30 5.81 0.00 0.00 19.40 9.04 23.14 0.00 2.39 0.00 24 ER4c ExonRegion 0 1.63 18.90 27.47 6.88 5.35 0.70 5.29 7.64 9.86 14.39 0.00 1.10 2.24 1.54 1.01 0.18 0.27 2.22 7.49 18.81 0.00 0.26 0.24