Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PAX5 Gene 0 100.74 0.37 12.05 1.79 41.02 2.03 5.93 6.68 3.11 0.13 418.92 166.34 303.91 593.78 412.15 452.84 507.03 30.01 0.09 23.78 0.00 0.02 0.00 2 377840 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.00 6.30 6.66 7.77 0.00 7.35 16.46 1.78 0.00 0.00 0.00 0.00 0.00 3 377852 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 377853 Transcript 0 3.04 0.00 1.69 2.06 0.00 0.00 0.00 0.00 0.00 0.00 9.42 0.00 6.82 4.94 0.00 0.00 4.77 2.03 0.00 0.00 0.00 0.00 0.00 5 358127 Transcript 0 99.12 0.49 17.49 1.95 47.37 2.72 6.35 7.43 3.39 0.17 470.68 186.29 339.54 634.52 448.47 487.96 525.61 32.28 0.15 24.96 0.00 0.04 0.00 6 377849 Transcript 0 0.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.04 0.78 0.99 0.02 2.74 0.59 0.18 0.00 0.00 0.28 0.00 0.00 0.00 7 377847 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 414447 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.82 0.00 0.00 7.69 4.49 0.00 0.00 0.00 0.00 0.00 0.00 9 446742 Transcript 0 6.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 10 432188 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.93 0.00 19.92 6.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 IG49 Intergenic 0 1.97 0.00 0.06 0.06 0.33 0.17 0.12 0.00 0.06 0.00 12.46 4.40 4.21 16.91 10.23 6.08 11.76 0.00 0.00 0.00 0.00 0.00 0.00 12 IG49_AR3 ActiveIntergenicRegion 0 5.89 0.00 0.33 0.56 0.74 1.01 0.36 0.00 0.00 0.00 24.12 20.80 10.17 37.16 10.05 11.92 22.84 0.00 0.00 0.00 0.00 0.00 0.00 13 IG49_SR1 SilentIntergenicRegion 0 1.09 0.00 0.03 0.00 0.24 0.08 0.12 0.00 0.00 0.00 10.40 2.63 3.74 14.60 9.60 5.26 9.35 0.00 0.00 0.00 0.00 0.00 0.00 14 IG49_AR2 ActiveIntergenicRegion 0 3.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.05 0.00 0.00 11.57 11.61 11.89 16.50 0.00 0.00 0.00 0.00 0.00 0.00 15 IG49_AR1 ActiveIntergenicRegion 0 2.89 0.00 0.00 0.00 0.45 0.00 0.00 0.00 0.31 0.00 13.22 1.21 2.53 13.51 12.79 5.48 14.13 0.00 0.00 0.00 0.00 0.00 0.00 16 ER1a ExonRegion 0 294.32 0.55 0.25 0.83 78.81 0.25 8.15 1.76 0.50 0.00 40.33 12.61 31.41 96.90 92.87 123.61 95.42 0.00 0.00 0.00 0.00 0.00 0.00 17 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER1b ExonRegion 1 181.37 0.00 0.54 3.34 57.40 6.23 9.85 9.54 0.30 0.00 92.37 151.24 211.68 210.81 153.19 231.71 215.44 0.00 0.00 0.00 0.00 0.00 0.00 19 E1_Ac KnownBoundary 1 100.91 0.00 1.83 9.02 127.50 0.00 22.61 27.31 1.24 0.00 92.55 188.61 235.54 237.74 214.23 333.67 187.75 0.00 0.00 0.00 0.00 0.00 0.00 20 ER1c ExonRegion 1 60.86 0.00 1.17 6.63 185.52 0.00 14.45 20.78 3.40 0.00 103.22 145.28 239.50 214.24 229.07 414.31 224.75 0.00 0.00 0.38 0.00 0.00 0.00 21 E1_Da NovelBoundary 0 3.78 0.00 0.00 1.93 36.67 0.00 3.80 0.00 0.00 0.00 8.84 5.25 6.49 2.47 9.02 32.30 12.81 0.00 0.00 0.00 0.00 0.00 0.00 22 E1a_E3a KnownJunction 1 47.12 0.00 0.00 3.50 288.96 0.00 10.11 18.77 4.86 0.00 135.67 111.34 290.40 213.55 205.95 453.30 245.54 0.00 0.00 0.00 0.00 0.00 0.00 23 E1a_E4a NovelJunction 0 0.00 0.00 0.00 0.00 12.82 0.00 0.00 0.00 0.00 0.00 8.05 0.00 20.45 7.65 9.52 7.43 16.83 0.00 0.00 0.00 0.00 0.00 0.00 24 I1_SR6 SilentIntronRegion 1 4.82 0.00 2.51 0.36 0.48 0.33 0.24 0.46 0.16 0.00 102.80 13.72 17.39 179.31 91.91 75.12 128.73 13.67 0.00 9.49 0.00 0.00 0.00 25 E2_Aa NovelBoundary 0 17.78 0.00 2.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 153.88 40.81 80.51 320.80 147.10 145.94 208.23 16.37 0.00 29.72 0.00 0.00 0.00 26 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.85 0.00 39.85 12.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 E2a_E3a NovelJunction 0 16.67 0.00 7.89 0.00 0.00 0.00 0.00 2.09 0.00 0.00 165.15 48.32 39.93 201.25 85.17 97.41 163.53 10.74 0.00 13.93 0.00 0.00 0.00 28 E2a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER3a ExonRegion 0 127.20 1.23 7.58 4.24 169.76 3.97 16.61 14.65 4.18 0.00 387.07 283.87 462.90 525.78 484.88 574.93 578.05 22.30 0.00 21.94 0.00 0.00 0.00 30 E3a_E4a KnownJunction 1 350.06 0.00 8.52 3.50 75.55 14.93 8.83 18.98 2.72 0.00 396.84 358.47 832.90 481.49 455.28 592.49 510.80 26.28 0.00 21.73 0.00 0.00 0.00 31 E3a_E5a KnownJunction 0 6.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 32 ER4a ExonRegion 0 690.94 0.02 14.30 3.90 57.61 2.16 13.81 16.00 7.44 0.00 505.20 312.62 637.73 735.51 683.29 722.29 841.91 35.55 0.00 42.78 0.00 0.00 0.00 33 E4a_E5a KnownJunction 1 824.22 0.00 11.77 3.33 131.15 2.78 24.47 15.32 11.00 0.00 564.72 387.28 994.90 930.08 940.48 855.76 905.56 44.77 0.00 49.98 0.00 0.00 0.00 34 I4_AR2 ActiveIntronRegion 0 26.55 0.00 5.84 0.88 7.99 0.00 2.49 1.12 0.00 0.00 1.40 9.46 10.66 27.62 23.37 4.03 4.19 0.40 0.00 0.00 0.00 0.00 0.00 35 ER5a ExonRegion 1 222.56 0.00 7.67 2.29 50.84 0.56 9.04 14.68 9.35 0.00 493.84 281.62 663.17 694.87 645.15 563.88 701.57 45.00 0.00 43.67 0.00 0.00 0.00 36 E5_Da NovelBoundary 0 73.27 0.00 1.57 0.00 8.49 0.00 18.81 0.00 0.00 0.00 0.00 0.00 26.78 51.03 39.06 0.00 4.39 0.00 0.00 0.00 0.00 0.00 0.00 37 E5a_E6a KnownJunction 0 59.79 0.00 14.28 0.00 23.09 0.00 6.76 22.02 7.67 0.00 406.10 209.32 523.83 548.00 461.09 455.61 662.46 59.73 0.00 36.18 0.00 0.00 0.00 38 E5a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.82 0.00 0.00 7.69 4.49 0.00 0.00 0.00 0.00 0.00 0.00 39 I5 Intron 0 26.36 0.11 4.49 0.65 12.62 0.48 2.39 1.06 0.31 0.00 1.16 6.11 7.55 27.29 23.37 7.09 9.92 0.31 0.00 0.68 0.00 0.00 0.00 40 I5_SR1 SilentIntronRegion 0 29.80 0.00 4.53 1.04 15.44 0.60 2.79 0.16 0.47 0.00 1.52 6.48 14.56 26.14 24.40 7.16 11.13 0.09 0.00 1.18 0.00 0.00 0.00 41 I5_AR1 ActiveIntronRegion 0 28.77 0.00 6.73 0.83 14.87 0.00 2.90 3.98 0.88 0.00 0.27 14.05 0.52 34.16 25.70 6.63 11.87 0.79 0.00 0.57 0.00 0.00 0.00 42 I5_SR2 SilentIntronRegion 0 23.91 0.27 3.95 0.25 9.99 0.56 1.98 1.04 0.00 0.00 1.15 3.58 3.68 27.41 22.12 7.59 8.74 0.39 0.00 0.19 0.00 0.00 0.00 43 ER6a ExonRegion 0 63.31 0.00 10.13 1.53 22.57 0.81 8.24 12.07 7.31 0.76 435.07 256.61 450.00 677.46 620.24 568.61 664.86 44.44 0.00 39.76 0.00 0.00 0.00 44 E6_Da NovelBoundary 0 35.93 0.00 1.09 1.53 19.19 0.00 1.59 5.46 2.72 0.00 289.97 122.74 225.15 386.19 374.19 301.89 538.10 14.55 0.00 27.23 0.00 0.00 0.00 45 E6b_E7a KnownJunction 0 56.23 0.00 3.64 2.76 10.78 0.00 12.37 8.58 6.25 0.00 607.00 244.73 547.20 714.23 690.53 592.32 997.57 25.45 0.00 50.62 0.00 0.00 0.00 46 ER6b ExonRegion 0 43.69 0.00 4.03 2.73 13.95 0.00 8.04 8.40 5.29 0.00 521.88 223.90 460.29 701.85 636.20 519.70 908.93 16.50 0.00 46.35 0.00 0.00 0.00 47 ER7a ExonRegion 0 68.09 0.00 6.36 2.47 12.51 0.53 5.29 9.56 6.20 0.00 511.05 207.99 448.96 643.80 624.91 525.53 738.20 37.97 0.00 29.91 0.00 0.00 0.00 48 E7a_E10a KnownJunction 0 66.83 0.00 6.50 1.50 4.24 0.00 8.30 3.90 1.30 0.00 546.03 131.29 373.84 668.73 629.21 431.17 675.17 29.56 0.00 33.11 0.00 0.00 0.00 49 E7a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.00 6.30 6.66 7.77 0.00 7.35 16.46 1.78 0.00 0.00 0.00 0.00 0.00 50 E7b_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 ER7b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.33 5.94 0.00 15.67 2.97 1.10 0.00 0.00 1.70 0.00 0.00 0.00 52 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53 ER8a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.36 0.00 0.00 0.36 0.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54 E9a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55 ER9a ExonRegion 0 0.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.26 0.00 0.00 0.11 0.39 0.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56 ER10a ExonRegion 0 60.73 0.00 3.04 3.59 14.57 0.00 4.56 3.90 3.60 0.00 450.96 186.77 446.74 609.59 540.55 503.64 551.20 46.28 0.00 22.42 0.00 0.00 0.00 57 E10a_E11a KnownJunction 0 16.45 0.00 1.71 3.16 19.10 0.00 0.00 2.55 3.47 0.00 404.42 230.93 402.08 569.72 589.16 596.17 505.47 47.13 0.00 26.85 0.00 0.00 0.00 58 E10a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.37 0.00 6.49 14.60 10.75 3.59 9.16 1.82 0.00 0.00 0.00 0.00 0.00 59 E10a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 60 ER11a ExonRegion 0 28.90 0.00 3.57 1.79 7.74 0.00 2.78 1.34 3.16 0.56 348.02 156.84 347.25 572.45 462.61 402.40 509.76 25.54 0.00 25.57 0.00 0.00 0.00 61 E11a_E12a KnownJunction 0 31.64 0.00 2.54 0.00 7.64 0.00 6.49 4.35 2.89 1.53 324.92 172.26 433.41 481.20 366.65 324.10 356.71 35.98 0.00 33.81 0.00 0.00 0.00 62 E11a_E13a KnownJunction 0 3.04 0.00 1.69 2.06 0.00 0.00 0.00 0.00 0.00 0.00 9.42 0.00 6.82 4.94 0.00 0.00 4.77 2.03 0.00 0.00 0.00 0.00 0.00 63 ER12a ExonRegion 0 25.30 0.00 3.18 0.00 5.44 0.00 2.28 2.11 1.11 0.94 345.79 141.38 332.72 632.68 467.47 466.38 443.76 39.69 0.00 27.34 0.00 0.00 0.00 64 E12a_E13a KnownJunction 0 63.49 0.00 4.76 0.00 12.48 0.00 2.16 0.00 1.48 1.67 385.83 130.84 258.42 629.82 400.64 414.25 634.03 35.48 0.00 24.03 0.00 0.00 0.00 65 ER13a ExonRegion 0 23.13 0.00 1.60 0.59 5.82 0.79 1.32 0.00 2.05 0.41 269.17 91.93 216.07 370.96 286.68 213.61 353.04 17.64 0.00 11.70 0.00 0.00 0.00 66 E13_Da KnownBoundary 1 19.93 0.00 3.08 1.76 4.24 2.33 4.37 0.00 3.50 0.00 198.68 49.97 262.65 496.09 267.38 291.21 300.70 20.31 0.00 21.16 0.00 0.00 0.00 67 ER13b ExonRegion 0 25.60 0.15 4.02 1.03 13.07 0.99 3.11 4.07 1.95 0.00 386.29 117.86 192.00 616.45 329.36 408.22 505.71 30.35 0.00 24.07 0.00 0.00 0.00 68 E13_Db KnownBoundary 1 14.15 0.00 6.06 0.00 28.35 0.00 6.23 10.31 1.19 0.00 338.35 118.54 88.79 520.04 274.43 402.20 561.38 25.45 0.00 27.48 0.00 0.00 0.00 69 ER13c ExonRegion 0 99.12 0.49 17.49 1.95 47.37 2.72 6.35 7.43 3.39 0.17 470.68 186.29 339.54 634.52 448.47 487.96 525.61 32.28 0.15 24.96 0.00 0.04 0.00 70 IG48_AR1 ActiveIntergenicRegion 0 9.59 29.02 10.42 6.05 23.91 8.76 54.95 21.89 6.96 60.01 7.91 54.16 24.47 20.79 18.23 15.12 13.30 16.39 7.31 45.67 0.14 6.08 1.64