Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-195F19.3 Gene 0 2.82 6.78 21.15 7.65 4.21 20.98 8.27 9.82 9.65 12.30 0.00 0.00 0.00 0.25 0.24 0.14 0.00 20.23 17.92 13.99 25.21 17.78 15.81 2 423809 Transcript 0 0.00 2.77 0.88 1.35 0.00 2.14 0.54 1.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.74 1.24 0.00 2.02 0.84 0.00 3 325151 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 416454 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 421828 Transcript 0 2.10 5.93 10.84 4.51 2.53 11.77 5.65 9.27 6.40 10.03 0.00 0.00 0.00 0.33 0.00 0.25 0.00 14.26 11.16 9.86 14.89 8.79 11.32 6 ER1a ExonRegion 0 0.00 3.10 0.35 0.67 0.00 4.28 1.07 1.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.91 2.48 0.00 1.33 1.69 0.00 7 E1_Da NovelBoundary 0 0.00 3.22 5.20 5.69 0.00 9.82 0.00 0.00 1.79 4.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.87 4.80 3.13 3.15 0.00 4.35 8 E1a_E2c KnownJunction 0 0.00 2.43 1.42 2.03 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 2.72 0.00 0.00 9 E2_Aa NovelBoundary 0 10.74 15.66 2.66 2.93 0.00 30.66 11.35 2.42 8.94 15.90 0.00 0.00 6.82 0.00 0.00 0.00 0.00 3.77 16.00 10.42 16.93 15.98 10.59 10 ER2a ExonRegion 0 0.00 9.07 25.71 9.92 23.01 98.73 46.26 11.86 6.99 10.87 0.00 0.00 0.00 0.10 0.00 0.00 0.00 19.51 41.54 26.47 56.02 53.80 22.61 11 E2_Ab NovelBoundary 0 3.11 5.59 5.20 9.36 3.48 29.19 9.23 5.01 4.75 8.06 0.00 0.00 0.00 0.00 0.00 4.02 0.00 1.70 0.00 5.56 10.63 10.47 7.34 12 E2a_E2c KnownJunction 0 0.00 20.92 83.76 48.94 41.60 173.65 75.03 34.79 33.97 37.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59.57 52.24 45.57 71.60 63.19 19.80 13 ER2b ExonRegion 0 0.00 14.24 41.66 13.63 32.11 148.54 64.87 15.56 11.12 17.20 0.00 0.00 0.00 1.62 0.00 0.00 0.00 35.11 57.34 40.43 83.74 68.76 46.99 14 ER2c ExonRegion 0 2.88 7.04 17.34 7.39 1.79 12.65 5.54 8.11 7.13 11.80 0.00 0.00 0.00 0.20 0.00 0.51 0.00 19.02 19.01 14.59 21.58 12.46 16.09 15 E2_Ac KnownBoundary 0 46.67 73.74 42.78 29.73 31.15 103.35 38.42 19.55 18.34 38.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50.57 69.84 40.65 113.86 17.57 51.13 16 ER2d ExonRegion 0 19.59 28.80 66.01 24.33 11.06 86.41 31.99 22.21 24.09 31.75 0.00 0.00 0.00 0.90 0.00 0.00 0.00 64.51 42.27 37.28 74.43 26.28 46.46 17 E2_Db NovelBoundary 0 3.33 2.50 4.44 2.96 0.00 5.39 1.94 4.23 0.00 4.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.52 8.47 5.75 21.99 0.00 3.84 18 E2b_E3a KnownJunction 0 0.00 3.16 46.24 14.78 0.00 17.89 2.12 20.41 30.99 19.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27.03 12.42 26.33 59.24 22.72 11.27 19 ER3a ExonRegion 0 3.60 3.80 73.81 19.76 5.57 24.94 3.49 19.16 36.13 31.18 0.00 0.00 0.00 0.00 0.58 0.00 0.00 36.62 49.05 34.47 104.09 50.42 31.32 20 E3_Da KnownBoundary 0 3.48 0.00 20.11 3.43 4.24 12.89 0.00 7.68 4.37 5.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.76 14.31 6.52 8.96 2.69 0.00 21 E3a_E3b KnownJunction 0 3.11 3.35 68.86 35.29 0.00 5.00 2.25 17.58 36.31 36.18 0.00 0.00 0.00 0.00 4.45 0.00 0.00 55.75 75.11 62.38 75.92 98.83 81.52 22 ER3b ExonRegion 0 0.61 0.51 13.65 1.06 0.60 2.99 0.45 3.09 2.86 4.00 0.00 0.00 0.00 0.00 1.22 0.00 0.00 7.48 6.83 7.69 6.22 5.26 2.51 23 E3_Ab KnownBoundary 0 0.00 3.35 4.55 0.00 0.00 2.73 1.68 2.34 7.81 1.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.74 4.24 2.43 8.71 3.12 3.93 24 ER3c ExonRegion 0 1.48 6.75 28.12 13.02 5.07 18.21 5.69 11.33 14.40 15.99 0.00 0.00 0.00 0.14 0.42 0.00 0.00 31.87 23.65 15.44 22.20 35.88 25.14 25 E3_Db KnownBoundary 0 0.00 2.57 4.32 0.00 13.07 19.99 3.62 2.18 4.17 3.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.73 0.00 2.62 2.29 0.00 0.00 26 E3_Dc KnownBoundary 0 0.00 8.62 1.39 1.43 0.00 4.43 2.08 6.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.97 0.00 11.76 0.00 0.00 8.28 27 ER3d ExonRegion 0 0.00 8.13 4.90 1.36 13.38 43.09 9.27 8.64 4.94 3.44 0.00 0.00 0.00 1.62 0.00 0.00 0.00 14.78 0.00 8.51 4.41 4.17 8.81 28 ER3e ExonRegion 0 1.32 4.81 4.34 1.62 3.27 10.88 5.76 10.42 5.67 8.26 0.00 0.00 0.00 0.45 0.00 0.00 0.00 9.50 3.32 5.12 8.19 5.13 6.54 29 IG45 Intergenic 0 3.51 4.76 9.77 4.06 11.30 10.65 7.95 11.38 9.48 12.26 0.28 0.34 0.38 0.07 0.12 0.07 0.24 10.99 4.90 9.66 8.23 5.80 6.67 30 IG45_AR2 ActiveIntergenicRegion 0 3.86 4.92 8.82 4.17 12.07 12.72 9.13 12.61 10.23 13.05 0.33 0.29 0.52 0.09 0.00 0.10 0.34 11.41 4.75 11.05 9.34 6.68 7.86