Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KIF24 Gene 0 8.72 14.95 9.27 3.19 11.25 5.84 22.70 15.09 5.44 18.50 35.73 33.97 21.23 47.73 20.65 49.93 40.34 52.41 17.82 32.77 3.50 5.95 6.91 2 420188 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 345050 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 403891 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 379166 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 402558 Transcript 0 0.33 0.00 0.28 0.63 0.00 0.00 0.62 0.80 0.00 0.26 1.80 0.00 0.73 0.00 0.45 1.85 0.00 0.43 0.00 1.32 0.00 0.65 0.00 7 379174 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 443226 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 379171 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ER1a ExonRegion 0 3.41 15.75 0.98 0.77 4.31 1.80 9.42 3.22 0.59 4.60 12.07 0.46 9.63 11.59 3.94 16.52 11.15 4.84 14.52 17.29 0.00 3.93 2.16 11 E1a_E3a KnownJunction 0 0.00 5.26 0.00 1.76 0.00 2.27 9.36 1.97 3.10 2.85 9.42 6.15 13.47 11.42 0.00 10.94 4.30 2.57 4.80 6.52 0.00 3.12 4.35 12 ER2a ExonRegion 0 0.66 0.00 0.57 1.26 0.00 0.00 1.24 1.60 0.00 0.52 3.61 0.00 1.46 0.00 0.90 3.70 0.00 0.86 0.00 2.65 0.00 1.30 0.00 13 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER3a ExonRegion 1 3.31 18.90 4.22 2.18 7.77 3.60 22.51 11.69 4.36 14.66 29.42 56.16 30.20 38.91 11.30 33.34 37.61 27.54 10.33 35.77 2.03 5.86 6.87 15 E3a_E4a KnownJunction 0 2.74 12.56 7.92 1.66 16.04 9.20 34.80 0.00 1.74 14.94 26.01 44.56 18.51 61.57 32.02 42.47 40.02 15.67 18.45 21.16 2.84 2.57 0.00 16 E4_Aa NovelBoundary 0 11.19 0.00 0.00 0.00 0.00 0.00 10.86 8.13 0.00 0.00 0.00 0.00 0.00 5.24 0.00 0.00 4.11 9.00 0.00 3.07 0.00 0.00 0.00 17 ER4a ExonRegion 0 2.34 14.11 10.19 1.99 15.58 6.17 28.12 9.22 2.76 13.24 33.21 54.10 33.00 49.44 11.61 33.73 39.75 25.09 11.65 35.59 3.13 5.83 4.31 18 E4a_E5a KnownJunction 0 0.00 5.46 11.97 0.00 4.33 9.48 24.11 0.00 1.65 9.00 43.80 37.36 27.27 37.97 9.77 18.88 24.12 21.76 11.29 19.11 0.00 3.00 4.35 19 E4a_E7a NovelJunction 1 0.00 0.00 4.49 2.06 0.00 0.00 3.36 2.55 1.22 2.58 0.00 0.00 19.97 2.47 5.19 4.36 0.00 6.30 0.00 4.86 0.00 2.76 0.00 20 E4a_E8a KnownJunction 0 0.00 2.83 0.00 0.00 0.00 0.00 0.00 2.22 1.79 2.20 0.00 6.45 0.00 2.12 0.00 0.00 0.00 2.57 3.67 6.20 0.00 0.00 0.00 21 ER5a ExonRegion 0 5.51 13.32 10.09 1.06 5.35 3.93 32.64 3.07 3.24 11.83 34.52 36.89 31.11 41.63 8.17 36.61 31.32 33.07 6.50 24.99 2.11 4.57 2.43 22 E5a_E6a KnownJunction 0 0.00 6.31 10.88 0.00 12.99 2.90 14.13 4.23 1.22 4.51 25.64 42.91 33.11 48.97 8.90 34.26 34.69 13.85 8.38 11.95 2.41 2.63 7.17 23 ER6a ExonRegion 0 5.38 14.66 4.42 1.01 13.28 3.61 18.92 11.65 3.86 8.81 39.84 48.07 41.10 41.06 10.88 43.85 53.33 42.87 10.75 33.02 2.15 3.66 4.74 24 E6a_E7a KnownJunction 0 3.33 8.49 0.00 1.30 6.96 2.56 35.02 6.49 3.15 8.70 40.12 12.60 31.49 42.56 14.83 53.06 35.06 45.97 4.42 15.47 0.00 5.08 0.00 25 ER7a ExonRegion 1 3.97 7.83 1.02 1.22 9.33 4.31 24.21 6.58 5.82 11.83 37.89 45.12 33.31 46.49 7.91 50.80 53.71 69.77 5.86 27.59 1.30 6.04 5.11 26 E7a_E8a KnownJunction 1 3.19 6.12 0.00 1.40 18.25 0.00 25.79 9.12 5.73 16.49 35.38 12.60 20.45 68.10 0.00 53.83 43.95 82.08 8.09 37.39 0.00 6.00 0.00 27 ER8a ExonRegion 0 1.82 9.35 3.02 3.24 11.27 3.14 14.95 7.00 6.89 15.94 34.51 52.20 33.45 55.45 15.86 46.90 51.11 72.90 19.29 30.41 3.99 3.16 7.46 28 E8a_E9a KnownJunction 0 0.00 10.72 1.09 1.27 8.49 2.27 15.10 16.47 7.84 19.37 29.43 37.06 20.45 60.39 18.30 57.59 52.27 70.55 11.95 45.45 3.15 5.88 8.62 29 E9_Aa NovelBoundary 0 13.56 0.00 0.00 0.00 4.33 0.00 3.62 2.55 1.71 1.34 0.00 0.00 6.33 0.00 4.45 0.00 0.00 0.00 3.58 0.00 0.00 0.00 0.00 30 ER9a ExonRegion 1 7.15 7.10 5.03 3.41 5.50 1.87 15.63 9.13 5.32 16.85 41.32 43.87 32.87 61.53 7.01 38.67 44.87 66.55 9.20 35.69 1.77 2.00 7.18 31 E9_Da NovelBoundary 0 0.00 0.00 8.66 3.93 0.00 0.00 21.02 7.27 1.79 7.95 0.00 0.00 6.17 2.24 0.00 12.13 4.77 2.57 4.80 3.00 0.00 3.12 4.10 32 E9a_E10a KnownJunction 1 7.56 3.29 2.99 6.19 3.82 0.00 18.95 6.78 5.67 2.58 47.06 93.93 47.40 59.16 11.50 54.77 54.23 85.52 21.08 30.17 0.00 0.00 20.40 33 E10_Aa NovelBoundary 0 3.70 9.14 5.50 9.29 11.12 2.50 24.38 16.27 1.79 3.33 7.26 13.50 0.00 2.41 6.18 35.29 12.62 28.77 17.60 37.90 0.00 0.00 8.11 34 ER10a ExonRegion 0 1.47 3.62 3.86 3.35 7.95 5.63 13.35 8.38 4.97 6.87 44.59 53.52 34.72 69.88 22.57 51.15 47.31 63.03 19.95 31.65 3.12 4.11 16.36 35 E10a_E11a KnownJunction 1 0.00 0.00 1.71 1.60 0.00 5.45 15.02 6.41 7.70 14.77 27.32 68.27 12.50 64.16 4.45 60.92 26.46 32.29 25.60 27.74 0.00 5.45 7.43 36 E11_Aa NovelBoundary 0 10.37 13.35 3.46 1.63 0.00 0.00 4.02 8.38 2.46 3.09 1.95 0.00 0.00 8.48 0.00 8.37 15.52 18.32 0.00 5.62 0.00 0.00 4.10 37 ER11a ExonRegion 1 3.91 8.50 7.36 5.08 5.59 1.42 20.15 16.45 4.17 18.56 33.21 56.09 33.98 59.07 10.31 60.36 41.68 49.74 13.35 40.56 2.74 6.48 4.75 38 E11_Da NovelBoundary 0 0.00 6.38 1.57 0.00 0.00 0.00 9.98 0.00 0.00 1.13 2.32 0.00 0.00 5.06 0.00 4.10 8.60 16.42 3.86 8.76 0.00 0.00 4.10 39 E11a_E12a KnownJunction 1 0.00 16.12 4.38 5.66 8.32 0.00 20.93 23.00 1.74 14.99 19.64 55.82 20.94 68.46 4.45 77.33 15.80 62.35 20.89 41.16 5.75 5.63 4.35 40 ER12a ExonRegion 0 4.37 10.65 6.07 3.53 9.52 6.31 20.08 13.58 4.22 19.78 41.55 35.74 27.66 53.30 16.63 55.43 38.92 55.59 23.44 36.32 4.14 6.75 8.31 41 E12_Ab KnownBoundary 0 0.00 3.29 1.51 0.00 0.00 0.00 14.04 7.72 10.39 11.09 14.06 0.00 0.00 17.36 0.00 10.42 21.04 43.98 8.09 12.98 0.00 2.51 0.00 42 E12_Ac KnownBoundary 0 2.96 5.66 1.80 0.00 0.00 5.62 14.35 12.45 1.24 5.69 11.69 12.00 0.00 7.00 0.00 25.72 31.32 15.92 7.81 16.94 0.00 2.94 3.41 43 ER12b ExonRegion 1 8.47 8.13 2.45 1.36 2.68 9.17 26.48 15.56 12.35 17.20 30.93 56.28 4.69 56.84 14.51 50.53 52.81 66.52 12.74 38.30 4.41 4.17 8.81 44 ER12c ExonRegion 0 6.67 9.53 7.85 3.25 4.46 5.66 20.17 11.02 6.97 18.89 31.97 28.93 10.11 51.52 22.49 61.85 41.07 88.86 20.24 39.58 4.33 7.25 7.98 45 E12_Da KnownBoundary 0 3.11 3.09 6.33 3.03 0.00 2.56 5.79 9.94 2.63 5.67 21.06 6.30 0.00 5.06 4.45 32.73 20.66 39.30 8.28 13.81 0.00 2.88 4.27 46 E12a_E12e KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 E12_Db KnownBoundary 0 3.33 5.46 10.17 1.37 0.00 2.38 10.11 10.72 2.55 10.05 2.42 7.50 0.00 4.71 0.00 11.36 3.83 32.79 8.19 19.81 5.07 2.63 0.00 48 E12b_E12d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49 ER12d ExonRegion 0 8.47 20.34 13.48 5.45 0.00 12.84 17.21 20.74 4.94 19.50 42.52 21.65 14.07 35.73 14.51 50.53 42.91 88.69 19.11 36.17 4.41 14.58 0.00 50 ER12e ExonRegion 0 5.60 11.61 10.81 2.58 9.60 7.66 17.62 22.33 5.63 27.31 29.76 11.14 8.63 49.40 20.87 50.15 53.07 60.18 15.37 33.97 4.15 6.98 3.88 51 E12_Ad KnownBoundary 0 7.19 10.06 9.82 0.00 0.00 4.83 15.06 9.57 4.25 18.99 23.48 6.30 13.64 17.54 4.45 38.02 37.21 31.34 28.05 23.59 3.15 6.25 3.33 52 E12_Ae KnownBoundary 0 5.93 2.76 8.07 3.80 0.00 0.00 17.14 18.44 1.22 16.84 29.95 11.70 0.00 14.66 28.56 28.03 23.38 44.44 22.97 31.83 3.15 6.00 4.18 53 ER12f ExonRegion 0 6.53 10.00 10.93 2.73 0.00 3.21 22.62 23.77 5.46 25.71 40.11 20.93 10.55 30.45 17.41 50.28 44.01 62.05 36.90 40.07 2.20 8.33 6.12 54 ER12g ExonRegion 0 6.67 22.19 16.19 3.09 2.81 7.61 25.71 34.15 6.08 27.83 50.67 31.57 7.54 57.13 21.37 62.90 59.75 71.10 15.32 38.67 0.56 2.93 4.76 55 E12_Dc KnownBoundary 0 0.00 20.33 17.95 3.83 7.81 22.26 9.80 20.62 2.49 34.36 27.22 22.96 20.94 71.75 16.56 62.97 41.89 75.28 14.40 35.92 0.00 3.12 0.00 56 ER12h ExonRegion 0 8.63 14.75 14.69 1.69 12.49 4.32 19.01 16.72 6.12 24.55 40.79 18.52 10.16 51.12 14.62 39.49 49.41 81.43 33.55 31.41 4.70 6.71 2.61 57 E12d_E13a KnownJunction 1 6.67 14.01 20.43 1.56 6.45 0.00 14.93 13.10 1.42 16.14 29.48 12.45 0.00 50.74 30.66 70.07 12.44 66.33 27.29 39.18 2.78 5.39 16.99 58 ER13a ExonRegion 0 2.21 9.24 13.40 3.38 9.59 9.99 16.55 12.01 4.27 20.82 31.69 14.78 6.54 52.97 14.32 44.93 34.38 63.08 27.65 34.18 2.06 4.57 9.25 59 E13_Da NovelBoundary 0 6.22 6.25 3.67 0.00 4.33 0.00 0.00 0.00 1.48 1.67 2.00 0.00 0.00 0.00 4.45 0.00 4.77 34.57 0.00 16.30 0.00 0.00 0.00 60 E13a_E14a KnownJunction 0 7.04 5.66 8.54 2.80 14.94 5.79 29.99 11.30 1.77 19.74 35.01 0.00 14.61 48.62 4.45 50.59 56.29 46.34 4.80 9.59 0.00 3.12 0.00 61 I13 Intron 0 0.78 1.13 2.54 1.32 0.50 0.17 4.54 2.63 0.68 2.53 1.07 5.56 2.50 2.92 3.95 7.98 5.19 21.59 3.54 7.68 0.00 0.58 1.36 62 I13_SR1 SilentIntronRegion 0 0.79 1.13 2.54 1.32 0.50 0.17 4.55 2.64 0.68 2.54 1.08 5.58 2.51 2.93 3.96 8.01 5.21 21.66 3.55 7.71 0.00 0.58 1.36 63 E14_Aa NovelBoundary 1 3.78 3.35 4.85 2.06 0.00 0.00 5.56 6.86 0.00 2.71 2.58 30.76 6.82 0.00 10.75 4.36 7.76 10.40 9.22 15.08 3.15 0.00 0.00 64 ER14a ExonRegion 0 17.20 21.00 14.63 4.10 17.17 7.47 28.75 20.60 7.17 21.50 38.14 29.21 16.58 49.03 32.51 57.03 41.02 52.87 19.48 30.69 4.25 6.33 7.70