Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GNE Gene 0 48.71 141.65 81.77 74.32 79.21 113.14 77.21 81.82 93.27 98.01 116.98 95.50 125.81 87.77 96.68 94.68 84.56 127.67 82.47 142.11 54.86 93.02 84.23 2 447283 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 396594 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 339267 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 377902 Transcript 0 2.46 23.00 2.26 3.34 5.14 14.41 6.28 9.75 8.60 11.17 21.26 0.00 12.08 7.81 7.29 12.30 13.26 9.92 10.24 21.06 20.47 9.38 21.60 6 486079 Transcript 0 3.78 3.35 0.00 0.00 0.00 2.21 2.25 8.71 4.48 2.61 9.79 0.00 0.00 0.00 4.45 4.36 0.00 8.21 9.60 3.26 8.96 5.88 8.11 7 ER1a ExonRegion 0 2.14 2.09 0.02 4.22 0.90 0.00 3.68 5.16 3.06 2.26 0.65 1.46 2.42 0.00 0.98 1.00 1.11 1.62 3.33 2.16 4.47 2.11 6.57 8 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 1.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.91 9 E2_Aa NovelBoundary 0 14.00 6.18 5.06 3.60 0.00 15.62 11.22 0.00 3.41 3.04 25.95 0.00 13.64 41.38 13.35 28.80 18.33 29.93 9.41 9.78 38.86 15.43 36.62 10 E2_Ab NovelBoundary 0 2.96 25.39 8.63 1.96 30.98 20.50 27.03 11.99 8.36 7.92 39.06 0.00 0.00 26.08 0.00 62.29 21.79 65.95 31.15 42.89 31.14 27.13 114.13 11 ER2a ExonRegion 0 1.55 3.93 0.00 0.00 6.24 8.07 4.15 1.15 0.66 2.06 2.71 0.00 0.00 6.17 0.97 9.91 2.86 1.85 7.86 6.38 0.00 4.86 18.40 12 ER2b ExonRegion 0 11.68 38.69 13.30 6.18 14.85 64.26 24.73 13.56 11.58 19.08 22.34 3.41 5.88 22.13 27.14 39.75 26.46 27.65 29.34 50.31 27.77 17.97 51.07 13 E2a_E3a KnownJunction 1 3.70 58.21 5.88 9.39 7.22 32.65 13.12 24.81 22.89 26.03 61.07 0.00 20.45 17.25 20.64 27.00 36.93 27.90 22.87 53.12 61.41 23.27 45.33 14 E2a_E4a KnownJunction 0 3.78 3.35 0.00 0.00 0.00 2.21 2.25 8.71 4.48 2.61 9.79 0.00 0.00 0.00 4.45 4.36 0.00 8.21 9.60 3.26 8.96 5.88 8.11 15 E3_Aa NovelBoundary 0 24.00 9.01 15.70 7.33 3.82 7.27 24.07 13.31 4.60 9.54 0.00 0.00 13.64 4.71 0.00 11.45 7.39 4.56 4.52 11.70 2.84 3.12 12.38 16 ER3a ExonRegion 0 14.01 47.37 29.15 30.82 30.91 49.40 30.33 58.00 58.69 81.25 88.93 77.93 72.04 63.13 47.69 96.38 70.47 91.13 51.92 147.60 48.65 63.32 109.14 17 E3a_E4a KnownJunction 0 0.00 65.58 26.70 44.45 79.20 114.20 61.65 49.04 74.59 80.59 115.66 105.78 97.40 70.05 51.92 69.38 90.04 106.83 28.89 123.36 63.94 77.09 67.27 18 E4_Aa NovelBoundary 0 12.74 5.99 25.49 12.59 19.35 14.14 11.22 9.65 8.28 5.64 2.16 6.30 12.82 2.35 0.00 3.42 4.77 7.34 7.53 19.49 5.81 0.00 3.33 19 ER4a ExonRegion 0 20.40 94.57 52.08 69.52 47.67 95.00 60.90 64.61 95.31 91.96 144.01 120.43 134.12 122.87 69.82 114.95 99.61 232.65 75.01 213.18 92.44 83.35 92.00 20 E4_Da NovelBoundary 0 38.67 127.94 49.76 38.12 57.47 124.30 69.29 62.97 76.97 87.95 169.04 72.47 123.21 93.71 84.80 94.68 118.65 138.08 73.41 171.43 59.12 97.06 73.07 21 E4b_E5a KnownJunction 0 17.04 158.72 60.55 57.04 66.72 162.80 76.98 61.16 85.18 100.03 128.51 86.73 149.67 98.36 58.84 113.22 100.79 165.03 124.90 135.31 48.06 92.65 93.22 22 E4b_E6a NovelJunction 0 0.00 24.34 1.36 11.05 7.89 5.74 0.00 7.19 8.83 6.15 11.79 0.00 0.00 14.36 0.00 0.00 0.00 39.21 14.31 61.30 0.00 5.27 8.62 23 ER4b ExonRegion 0 22.14 124.30 50.80 47.53 61.10 148.92 64.16 52.50 83.68 96.29 148.35 83.88 119.79 98.94 58.03 101.80 109.07 176.15 78.44 147.25 53.99 97.23 85.04 24 ER5a ExonRegion 0 19.08 162.39 66.16 58.80 70.67 149.74 79.54 62.34 88.85 107.73 150.22 148.98 164.15 118.08 71.75 112.30 119.91 171.70 90.50 168.60 65.26 83.98 110.94 25 E5_Da NovelBoundary 0 29.19 13.62 6.83 8.96 24.79 14.48 40.41 14.91 14.18 9.08 7.48 13.20 38.63 4.77 0.00 0.00 13.00 6.51 4.52 18.86 2.84 3.12 10.93 26 E5a_E6a KnownJunction 0 25.56 171.09 56.33 45.12 51.61 99.54 103.87 62.51 86.92 100.38 102.03 156.20 116.88 87.29 58.59 91.51 104.82 163.08 84.99 125.85 55.29 51.44 106.87 27 ER6a ExonRegion 0 27.69 165.94 62.72 77.59 71.05 114.86 81.42 85.74 95.35 108.26 134.33 176.86 153.19 129.94 66.27 111.74 112.48 223.86 82.54 195.47 81.65 105.09 116.45 28 E6a_E7a KnownJunction 1 33.12 262.85 55.23 95.09 80.81 186.77 92.26 115.62 112.50 105.03 166.04 175.26 113.14 139.56 48.83 166.88 109.02 280.35 151.35 265.13 76.79 178.62 117.63 29 E7_Aa NovelBoundary 0 31.64 22.82 7.39 8.46 62.65 13.34 24.16 10.76 2.46 13.75 8.05 18.61 6.82 2.35 5.32 3.93 8.98 3.61 8.47 14.25 4.88 13.96 3.33 30 ER7a ExonRegion 0 30.71 224.53 61.76 67.90 68.93 168.23 98.03 77.19 90.14 100.80 163.64 108.29 104.51 121.07 62.94 118.75 125.85 185.30 90.06 169.03 83.32 118.45 107.69 31 E7a_E8a KnownJunction 0 38.82 248.44 67.56 59.43 65.03 110.05 77.68 48.84 87.76 112.98 108.03 93.18 108.60 100.65 64.03 71.69 80.60 135.72 83.20 129.82 65.18 96.32 103.80 32 E8_Aa NovelBoundary 0 7.56 5.79 8.60 3.23 11.46 12.89 35.33 5.54 0.00 10.42 2.16 0.00 0.00 0.00 4.45 11.79 7.67 1.66 0.00 3.20 0.00 3.12 4.01 33 ER8a ExonRegion 0 36.71 259.04 71.13 82.39 85.79 139.64 93.91 77.31 105.55 121.51 124.61 118.17 119.90 127.71 71.27 105.76 75.01 122.53 78.92 155.02 51.98 100.27 99.14 34 E8_Da NovelBoundary 0 33.64 15.00 4.49 20.34 15.03 2.27 20.27 12.08 1.19 6.93 0.00 18.16 0.00 0.00 12.24 11.71 26.09 3.52 3.67 11.89 0.00 0.00 21.51 35 E8a_E9a KnownJunction 0 41.19 250.61 74.15 98.29 63.50 99.15 95.04 78.12 110.76 130.36 143.46 156.20 85.38 127.08 101.98 137.57 71.81 165.48 85.56 178.39 36.02 106.85 168.51 36 ER9a ExonRegion 0 38.54 197.96 98.16 97.36 138.58 171.98 114.31 110.93 106.58 143.40 179.00 188.43 134.35 126.47 96.81 151.14 96.77 195.04 123.91 180.29 75.93 134.21 127.72 37 E9_Da NovelBoundary 0 19.11 11.84 18.54 16.65 36.16 4.66 10.11 17.21 16.35 5.86 12.53 6.30 41.39 12.13 19.28 14.18 11.97 13.27 31.91 15.98 5.93 8.39 7.94 38 E9a_E10a KnownJunction 0 28.08 203.38 112.59 83.47 87.69 139.24 101.93 116.12 93.69 131.38 125.14 168.05 148.53 139.74 98.77 137.49 77.70 201.59 111.53 188.24 55.72 74.09 113.02 39 E9a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 E10_Aa NovelBoundary 0 22.15 12.70 4.41 16.12 8.66 0.00 15.32 24.64 14.06 3.30 7.58 12.60 13.64 2.35 17.80 14.44 9.16 33.12 26.73 14.96 12.11 0.00 0.00 41 ER10a ExonRegion 0 48.17 227.26 120.86 98.88 82.88 154.52 91.97 117.42 120.97 135.20 173.32 124.85 103.37 118.46 117.97 173.00 117.00 260.59 123.50 195.83 114.53 114.57 144.37 42 E10a_E11a KnownJunction 0 32.82 206.67 123.98 100.59 50.68 128.51 105.99 94.84 102.78 120.61 133.14 37.06 32.95 94.00 128.81 81.26 111.64 185.26 106.45 158.13 99.59 70.42 87.24 43 ER11a ExonRegion 1 36.05 190.57 98.89 85.47 69.89 139.90 78.48 76.88 99.01 116.63 134.61 41.52 52.64 102.65 108.96 123.38 107.78 226.13 105.06 167.01 101.30 94.45 96.32 44 E11_Da NovelBoundary 0 10.37 9.14 10.97 9.42 24.96 10.73 8.44 21.81 15.77 20.84 13.32 12.15 0.00 11.89 4.45 7.26 30.76 13.31 18.54 14.51 8.22 11.57 4.10 45 E11a_E12a KnownJunction 1 20.97 126.62 93.58 122.36 51.53 119.25 66.82 87.90 100.58 117.74 164.46 6.30 6.66 116.84 122.01 79.72 93.88 206.44 94.03 181.21 93.65 117.20 64.53 46 ER12a ExonRegion 1 13.15 112.39 96.00 93.91 55.12 108.90 46.41 77.71 90.92 101.40 129.37 39.19 53.19 89.78 95.87 94.04 114.09 215.74 75.80 156.06 79.18 92.16 88.48 47 E12a_E13a KnownJunction 0 17.63 159.77 152.21 113.14 62.48 107.15 57.06 91.92 112.56 119.56 116.03 36.91 67.04 97.83 106.93 146.80 67.88 312.43 122.64 162.29 84.26 135.94 157.49 48 E13_Aa NovelBoundary 0 16.08 21.38 9.61 15.42 11.21 10.51 24.69 14.70 9.78 7.82 8.74 6.30 0.00 4.65 4.45 20.25 20.76 15.25 31.06 16.30 11.37 8.33 22.71 49 ER13a ExonRegion 0 65.68 143.07 94.97 80.64 93.08 115.70 85.08 90.65 100.04 99.74 112.37 91.45 145.05 79.28 115.50 86.15 80.77 95.29 85.90 129.52 42.49 99.30 75.11 50 ER13b ExonRegion 0 2.12 6.84 0.89 0.62 1.95 2.50 1.56 3.30 2.25 5.42 0.00 0.00 15.78 0.00 0.26 0.00 0.00 0.00 0.00 3.68 0.00 0.00 1.07