Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CCDC107 Gene 0 13.74 10.84 33.50 11.68 4.34 14.69 5.33 24.54 25.01 14.59 14.53 1.16 2.95 23.89 30.72 16.15 17.13 18.61 10.12 16.29 22.16 18.60 14.82 2 378407 Transcript 0 1.70 1.68 8.54 3.75 2.04 0.50 0.00 3.41 2.05 2.94 3.74 0.00 0.00 2.50 3.10 2.05 2.24 2.32 2.40 4.54 0.00 3.32 0.80 3 447015 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 378409 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 378406 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 426546 Transcript 0 1.00 0.00 0.00 0.00 2.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 327351 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 421582 Transcript 0 0.93 1.21 2.78 0.48 0.28 1.38 0.37 5.64 3.37 1.35 0.52 0.09 0.05 2.40 2.45 3.34 0.58 2.48 1.73 0.47 0.92 2.84 0.24 9 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.00 0.00 0.00 0.00 0.00 1.05 0.00 0.00 0.00 0.26 0.00 0.00 0.00 0.29 0.00 0.00 0.95 1.60 10 ER1b ExonRegion 0 0.71 0.68 0.41 0.45 1.78 3.06 0.44 0.00 0.41 0.00 3.87 0.00 0.00 0.54 6.77 0.00 1.10 1.85 4.25 0.00 0.00 2.08 2.94 11 ER1c ExonRegion 0 19.31 7.54 10.47 2.92 3.22 18.23 6.03 6.41 10.30 7.28 18.68 0.46 4.24 14.67 30.15 16.10 16.64 9.40 10.71 12.96 19.70 8.17 23.65 12 E1a_E2a KnownJunction 0 39.34 6.64 38.05 11.02 0.00 2.78 15.02 16.63 29.34 18.75 35.11 6.15 6.82 22.01 48.71 21.28 25.62 20.64 9.60 14.51 62.52 8.45 3.84 13 ER2a ExonRegion 0 24.92 20.16 63.41 11.66 4.66 17.43 5.81 42.05 44.44 29.06 38.31 3.87 5.99 58.34 95.97 46.58 44.41 26.59 21.38 46.32 59.40 35.42 36.98 14 E2a_E3a KnownJunction 0 46.90 64.92 109.75 17.58 31.83 85.35 36.17 82.85 57.29 44.54 51.86 6.30 0.00 83.53 55.38 77.16 66.01 54.51 13.55 73.44 66.29 44.58 48.23 15 E3_Aa NovelBoundary 0 22.23 3.29 18.95 3.16 8.49 6.64 24.20 22.59 3.15 13.81 13.21 24.46 0.00 19.01 33.75 34.18 20.20 29.68 8.28 32.28 2.35 23.70 11.87 16 ER3a ExonRegion 0 21.20 40.77 101.75 28.75 25.79 78.04 24.00 72.00 86.34 48.02 44.36 4.68 4.46 58.36 71.48 35.23 47.08 55.95 16.76 48.90 67.85 37.16 30.67 17 E3_Da KnownBoundary 1 10.96 9.93 24.30 6.36 13.41 12.83 18.11 9.36 5.15 8.27 7.42 10.65 0.00 4.59 30.04 6.58 3.93 27.65 8.75 27.04 0.00 5.69 0.00 18 E3a_E3b KnownJunction 0 44.60 40.26 121.26 47.75 23.17 87.05 24.02 79.64 112.21 61.43 56.01 11.25 20.13 89.18 132.15 53.75 54.51 97.21 43.95 37.58 95.88 69.38 27.57 19 ER3b ExonRegion 0 0.93 1.21 2.78 0.48 0.28 1.38 0.37 5.64 3.37 1.35 0.52 0.09 0.05 2.40 2.45 3.34 0.58 2.48 1.73 0.47 0.92 2.84 0.24 20 E3_Ab KnownBoundary 0 47.34 18.55 14.16 2.73 12.31 6.87 18.59 16.43 1.74 6.77 4.79 12.60 0.00 7.42 17.80 21.87 0.00 23.05 4.80 9.65 2.35 6.25 4.10 21 ER3c ExonRegion 0 29.89 24.02 136.26 47.34 11.80 24.02 13.43 92.15 85.95 59.59 52.45 4.81 6.67 86.58 104.15 47.88 64.84 76.70 33.20 58.65 73.53 69.59 37.39 22 E3_Db KnownBoundary 0 57.05 9.27 20.64 10.39 6.96 10.79 19.39 7.11 16.20 9.27 0.00 6.30 0.00 4.89 15.33 4.36 3.65 7.13 0.00 5.50 5.44 5.76 0.00 23 E3b_E3c KnownJunction 0 40.97 33.42 176.01 61.46 30.98 42.48 22.21 124.78 102.08 47.01 52.86 6.30 33.28 144.21 115.58 61.61 78.63 68.81 60.52 102.84 109.59 109.49 91.34 24 E3b_E3d KnownJunction 0 3.26 0.00 0.00 1.50 0.00 0.00 0.00 2.26 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 25 E3b_E3e KnownJunction 0 3.41 3.35 17.09 7.49 4.07 0.00 0.00 6.82 4.11 5.88 6.42 0.00 0.00 5.00 5.93 4.10 4.49 4.64 4.52 9.08 0.00 5.69 0.00 26 ER3d ExonRegion 0 7.06 2.71 8.29 5.09 1.51 3.65 2.73 4.66 10.07 6.35 2.62 0.04 0.28 7.51 4.13 0.66 2.67 5.73 3.76 3.80 2.29 4.36 0.80 27 E3_Ac KnownBoundary 0 17.48 12.76 4.26 1.70 7.30 8.29 5.96 3.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.27 0.00 18.24 3.86 2.43 0.00 2.51 0.00 28 E3_Ad KnownBoundary 0 11.34 6.71 5.50 1.93 8.49 8.18 4.33 2.14 0.00 0.00 2.68 0.00 0.00 2.94 0.00 0.00 4.58 7.25 0.00 0.00 0.00 0.00 0.00 29 E3_Ae KnownBoundary 0 23.78 11.91 79.74 35.93 11.46 19.53 4.06 69.42 71.56 25.25 9.27 0.00 0.00 12.30 22.25 15.81 17.67 21.68 7.53 36.50 30.64 14.57 7.00 30 ER3e ExonRegion 0 39.68 37.32 137.85 54.58 29.57 52.72 19.59 109.24 95.54 43.07 50.26 4.33 23.22 110.28 86.31 49.49 58.76 56.54 35.52 75.64 93.22 81.78 60.94 31 ER3f ExonRegion 0 34.92 33.05 135.10 42.25 22.74 46.99 17.38 99.39 96.18 41.58 42.04 1.08 14.07 75.52 58.03 39.01 43.32 39.96 32.25 62.23 73.55 57.56 41.11 32 ER3g ExonRegion 0 18.62 24.11 92.53 32.49 6.72 32.63 10.16 72.31 73.15 34.38 20.95 0.00 2.68 38.12 52.16 19.77 22.37 32.47 20.93 24.45 36.79 33.46 27.39 33 E3_Dc KnownBoundary 0 23.41 23.22 64.72 24.14 19.02 38.73 9.63 55.57 46.41 35.59 14.27 0.00 6.33 56.57 75.04 12.48 31.04 42.95 20.89 14.38 31.75 45.07 19.29 34 ER3h ExonRegion 0 10.22 10.92 61.55 24.49 6.65 16.87 3.37 59.31 55.23 24.74 15.08 0.00 2.68 49.37 55.12 30.40 43.29 55.17 19.20 20.36 46.91 57.03 21.98 35 E3_Dd KnownBoundary 0 17.56 15.06 19.34 12.39 11.29 7.61 2.25 36.02 26.91 15.34 30.64 5.40 0.00 17.07 19.53 14.61 27.30 54.01 4.14 28.38 16.74 10.53 8.71 36 E3d_E3f KnownJunction 0 15.78 0.00 53.84 20.24 4.33 10.73 4.42 41.90 38.51 18.08 12.48 0.00 8.28 49.56 41.41 29.14 27.02 37.68 26.35 15.47 30.95 53.40 30.13 37 ER3i ExonRegion 0 12.75 14.04 21.58 15.91 2.55 15.27 5.09 35.58 20.51 9.11 13.65 0.84 2.46 23.05 8.77 13.16 11.39 34.07 11.61 13.13 10.78 33.41 10.17 38 E3_Af KnownBoundary 0 30.01 5.53 20.90 6.89 12.14 10.73 7.99 15.20 16.67 11.71 2.42 11.85 0.00 35.91 26.21 16.66 11.69 15.88 17.60 14.89 0.00 20.02 11.52 39 ER3j ExonRegion 0 19.15 10.84 21.37 12.08 1.66 13.42 5.22 11.74 14.55 8.00 1.10 0.47 3.09 10.84 12.40 8.39 4.65 9.51 5.85 2.73 7.73 10.15 8.29 40 E3_De KnownBoundary 0 23.63 17.37 4.08 8.46 11.29 18.34 12.01 19.47 6.34 6.50 4.21 5.55 6.01 6.77 0.00 24.18 3.83 6.96 7.72 5.18 12.66 19.23 24.16 41 E3_Df KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 E3_Dg KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 0.00 0.00 0.00 0.00 0.00 43 ER3k ExonRegion 0 2.12 0.00 0.00 0.00 0.00 3.26 2.50 0.00 0.69 0.00 0.00 0.00 0.00 0.00 0.00 0.99 0.00 1.85 0.00 0.00 0.00 0.00 0.00 44 ER3l ExonRegion 0 2.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 0.00 0.00 0.00 0.00 45 ER3m ExonRegion 0 0.00 0.00 0.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.70 0.00 0.47 0.00 0.00 0.00 0.00 0.00 46 E3_Dh KnownBoundary 0 3.41 13.09 3.46 3.00 20.46 0.00 37.94 4.56 3.27 8.70 2.11 62.72 13.15 23.60 5.81 4.27 4.49 10.65 0.00 3.20 0.00 2.94 0.00 47 ER3n ExonRegion 0 1.00 0.00 0.00 0.00 2.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00