Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SIGMAR1 Gene 0 16.52 29.66 60.90 23.49 11.06 18.91 24.17 47.62 21.93 52.71 15.80 4.90 12.23 27.66 42.54 26.58 34.88 133.93 45.20 77.77 101.25 46.45 41.60 2 477726 Transcript 0 4.38 0.29 0.79 1.27 1.91 1.05 4.82 1.11 1.06 3.19 2.90 0.00 0.00 4.29 10.36 1.70 2.83 6.73 0.00 4.56 14.32 3.27 4.82 3 461426 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 277010 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 353468 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 378892 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 442847 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 360710 Transcript 0 3.04 13.35 42.43 5.46 0.00 0.00 0.00 10.10 7.12 23.13 17.06 5.85 0.00 21.31 9.89 17.26 19.17 81.95 22.87 70.56 62.83 19.78 42.68 9 497006 Transcript 0 7.34 17.14 34.19 15.99 6.13 15.62 5.56 18.66 5.25 24.71 3.69 1.49 1.15 9.88 16.50 14.41 9.52 60.48 26.46 43.88 24.01 14.12 10.63 10 478146 Transcript 0 3.08 30.19 34.60 12.96 9.05 15.18 12.97 22.01 12.02 17.55 5.57 0.37 5.53 9.35 12.52 15.79 6.83 53.84 22.69 38.11 11.35 10.46 8.39 11 476705 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER1a ExonRegion 0 4.38 0.29 0.79 1.27 1.91 1.05 4.82 1.11 1.06 3.19 2.90 0.00 0.00 4.29 10.36 1.70 2.83 6.73 0.00 4.56 14.32 3.27 4.82 13 E1_Ac KnownBoundary 0 44.75 13.02 4.73 5.59 21.31 32.54 59.62 25.22 18.11 34.68 31.27 0.00 6.82 32.61 65.89 40.76 50.86 103.26 27.77 24.61 144.99 36.07 84.00 14 ER1b ExonRegion 0 25.91 6.75 2.84 5.07 13.16 11.59 30.24 8.71 3.31 20.83 17.63 0.00 2.63 21.11 45.84 18.78 25.88 45.31 2.55 16.68 86.74 23.59 47.46 15 E1_Ad KnownBoundary 0 39.49 32.30 3.10 5.89 28.27 22.94 53.75 21.48 1.79 20.71 20.64 0.00 0.00 19.01 42.65 33.84 21.69 89.79 4.80 36.30 116.27 42.62 73.58 16 ER1c ExonRegion 0 43.58 30.05 11.35 8.18 25.77 25.94 60.31 19.53 7.00 36.62 26.70 0.00 4.69 36.81 69.31 42.71 36.55 131.81 15.34 35.38 152.79 54.33 93.76 17 E1_Ae KnownBoundary 0 16.82 57.69 10.41 10.39 18.00 25.67 65.67 21.48 6.42 21.52 11.90 0.00 0.00 24.19 54.27 50.24 28.89 159.02 56.47 80.73 67.46 52.42 89.46 18 ER1d ExonRegion 0 31.57 69.48 32.57 13.52 22.52 35.45 71.94 31.26 14.00 53.14 22.71 0.00 0.39 35.46 82.20 58.95 36.31 224.50 39.82 86.70 152.24 68.06 117.22 19 ER1e ExonRegion 0 14.82 72.10 44.60 12.46 8.56 34.89 58.14 28.59 16.16 49.05 14.97 4.21 0.00 37.87 60.35 49.51 36.40 191.27 40.77 117.93 144.50 56.97 103.29 20 E1_Af KnownBoundary 0 3.11 42.95 64.87 15.45 0.00 18.17 25.26 21.81 15.48 35.94 8.84 0.00 0.00 34.08 24.85 34.86 22.35 237.36 25.98 78.81 101.25 35.82 57.02 21 E1_Ag KnownBoundary 0 7.26 2.70 36.16 8.19 0.00 2.78 0.00 12.77 9.55 32.69 5.11 0.00 6.01 0.00 0.00 3.93 0.00 0.00 0.00 39.37 14.15 3.12 0.00 22 ER1f ExonRegion 0 4.69 32.83 47.44 9.44 1.15 15.85 18.63 18.15 15.79 40.39 7.32 8.66 0.00 20.07 18.03 16.13 18.63 126.17 13.42 86.02 93.34 25.45 45.10 23 ER1g ExonRegion 1 1.48 2.68 31.91 12.28 2.68 1.52 2.35 23.79 20.18 50.10 27.57 1.25 0.00 12.33 24.70 8.53 40.78 52.27 11.90 46.00 158.52 14.75 9.20 24 E1_Da KnownBoundary 1 7.56 5.46 56.44 35.03 7.47 10.68 6.14 57.83 36.14 94.42 42.06 0.00 0.00 48.97 88.51 30.68 114.73 134.68 57.98 108.72 291.59 45.80 35.60 25 E1a_E1h KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.07 0.00 0.00 0.00 26 ER1h ExonRegion 0 2.43 19.79 105.63 40.39 4.28 22.13 13.02 87.46 36.56 113.58 45.84 3.54 11.10 77.28 103.38 70.29 98.64 292.65 96.78 179.33 259.41 104.04 109.29 27 E1_Db KnownBoundary 0 0.00 0.00 3.13 0.00 0.00 0.00 2.16 0.00 0.00 2.71 0.00 0.00 0.00 0.00 5.44 3.67 9.54 2.57 0.00 7.99 0.00 2.39 0.00 28 E1b_E1h KnownJunction 0 6.82 28.55 193.13 54.17 15.28 19.42 18.06 148.77 41.81 136.62 43.80 12.60 19.15 82.47 102.97 124.50 96.96 535.91 100.71 251.51 253.72 143.41 156.98 29 ER1i ExonRegion 0 0.05 0.24 3.86 0.35 0.04 2.12 0.45 2.93 2.10 4.17 1.92 0.07 0.11 2.31 4.27 2.86 5.82 8.69 2.16 7.35 1.96 3.81 3.65 30 E1_Ah KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.11 5.10 0.00 3.26 0.00 3.12 0.00 31 E1_Ai KnownBoundary 0 2.96 4.93 14.58 7.92 0.00 6.81 3.53 11.34 5.61 10.64 4.16 0.00 5.68 20.60 26.70 26.40 18.70 47.30 18.82 72.61 46.09 33.37 13.57 32 ER1j ExonRegion 0 8.20 33.05 174.92 42.42 5.35 21.09 12.58 106.30 38.60 128.60 50.01 12.99 12.90 80.60 126.57 96.59 98.61 523.38 94.76 235.64 246.54 129.96 158.58 33 E1_Dc KnownBoundary 0 17.34 59.00 179.74 53.71 0.00 13.74 12.63 88.60 42.22 126.73 52.33 18.46 12.99 62.75 140.43 76.82 68.35 568.28 109.46 203.58 237.23 94.67 160.99 34 E1c_E1j KnownJunction 0 3.04 13.35 42.43 5.46 0.00 0.00 0.00 10.10 7.12 23.13 17.06 5.85 0.00 21.31 9.89 17.26 19.17 81.95 22.87 70.56 62.83 19.78 42.68 35 ER1k ExonRegion 0 12.70 40.52 166.98 42.41 1.96 16.43 10.08 91.21 34.39 118.00 48.77 11.16 17.14 77.77 138.93 92.02 86.33 520.64 88.33 218.74 243.26 116.20 151.46 36 ER1l ExonRegion 0 12.50 43.04 147.73 30.46 9.02 20.34 15.95 59.57 34.04 104.34 30.57 9.57 24.87 52.50 99.38 50.18 81.06 381.97 57.78 149.88 202.90 94.49 104.56 37 E1_Aj KnownBoundary 0 20.74 73.47 134.65 42.95 43.55 39.13 36.43 80.42 42.94 100.28 27.48 18.31 45.13 64.87 105.20 35.12 90.79 274.26 39.44 182.61 203.49 119.65 64.28 38 ER1m ExonRegion 0 11.89 69.60 195.19 78.24 46.44 69.03 110.20 120.90 55.09 147.57 71.01 8.32 25.67 92.45 128.95 68.05 133.99 346.21 104.57 267.66 358.13 116.49 105.02 39 E1_Dd KnownBoundary 0 26.52 111.76 244.40 112.91 92.28 83.70 161.99 153.74 75.17 190.40 79.13 6.60 33.28 110.31 161.57 106.21 125.57 421.91 128.47 312.81 443.25 120.87 116.44 40 E1d_E1k KnownJunction 0 0.00 3.29 7.63 2.00 0.00 0.00 8.48 4.64 2.75 5.05 5.21 0.00 0.00 0.00 0.00 3.76 4.68 21.35 0.00 11.95 2.84 2.69 0.00 41 ER1n ExonRegion 0 36.34 80.48 257.38 95.60 46.46 64.10 83.94 146.44 82.04 199.83 52.52 7.19 45.90 105.78 150.68 81.32 134.42 385.08 133.65 304.71 431.93 153.60 96.60 42 E1_De KnownBoundary 0 3.63 15.85 19.10 11.09 0.00 13.91 9.19 10.39 2.86 13.70 0.00 0.00 6.66 11.71 0.00 0.00 4.21 25.83 17.04 28.51 17.73 13.90 11.87 43 E1e_E1k KnownJunction 0 54.01 103.86 262.03 78.38 25.64 48.78 62.89 166.80 85.88 213.28 39.48 12.60 52.43 100.01 206.19 86.90 130.15 495.66 129.89 303.41 363.81 172.62 104.57 44 E1e_E2a KnownJunction 0 7.56 0.00 21.23 2.06 4.24 0.00 2.25 3.82 3.59 3.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.25 4.24 5.56 0.00 2.51 4.10 45 ER1o ExonRegion 0 7.34 17.14 34.19 15.99 6.13 15.62 5.56 18.66 5.25 24.71 3.69 1.49 1.15 9.88 16.50 14.41 9.52 60.48 26.46 43.88 24.01 14.12 10.63 46 E1_Ak KnownBoundary 0 23.41 29.01 65.73 32.73 28.27 29.70 12.37 28.79 6.45 35.67 2.00 0.00 0.00 7.42 19.53 19.91 21.22 96.54 24.47 61.49 30.21 20.08 30.30 47 ER1p ExonRegion 0 93.70 144.38 297.79 112.56 53.81 80.79 85.55 236.16 108.45 268.08 84.12 51.01 92.22 145.73 228.82 121.02 185.14 678.43 238.49 387.28 528.24 260.35 214.25 48 E1_Df KnownBoundary 0 0.00 61.24 46.39 12.52 10.27 2.38 20.71 17.05 9.92 12.06 5.37 6.30 13.15 10.18 14.59 12.73 11.50 45.35 23.06 38.16 12.29 5.88 3.59 49 E1f_E2a KnownJunction 0 122.69 118.93 313.50 121.00 54.07 70.75 101.00 253.30 105.79 238.56 45.12 52.82 116.39 134.26 212.87 117.15 186.26 667.28 379.02 411.56 594.36 314.62 234.07 50 ER1q ExonRegion 0 3.08 30.19 34.60 12.96 9.05 15.18 12.97 22.01 12.02 17.55 5.57 0.37 5.53 9.35 12.52 15.79 6.83 53.84 22.69 38.11 11.35 10.46 8.39 51 E1_Dg NovelBoundary 0 3.78 30.13 48.64 17.21 7.89 33.90 10.07 41.94 10.21 21.41 6.26 0.00 0.00 22.43 13.97 19.48 4.77 57.29 21.46 32.47 3.15 0.00 0.00 52 I1 Intron 0 12.29 49.27 35.79 17.69 14.33 20.14 15.26 20.34 6.85 14.58 5.44 2.59 5.61 13.13 14.03 19.15 11.98 29.62 23.13 38.23 6.40 9.83 8.53 53 I1_AR1 ActiveIntronRegion 0 18.62 52.33 10.84 1.26 10.83 25.76 24.35 7.45 3.44 5.45 1.90 2.77 14.36 13.22 12.60 23.36 7.32 20.61 22.15 35.41 9.16 7.29 2.25 54 I1_SR1 SilentIntronRegion 0 5.72 22.15 6.56 0.66 3.62 13.98 7.30 5.14 1.67 4.71 2.04 0.00 1.77 8.12 6.98 4.66 5.53 7.49 5.51 12.25 2.38 1.75 0.16 55 I1_AR2 ActiveIntronRegion 0 11.99 51.24 41.79 21.44 15.74 19.94 14.70 23.45 7.77 16.71 6.23 2.77 4.72 13.58 14.85 19.81 13.20 32.78 24.78 40.88 6.37 10.88 10.12 56 E2_Aa NovelBoundary 0 28.08 38.68 79.92 23.37 15.03 18.80 21.37 18.28 9.75 13.24 0.00 6.30 12.01 9.83 17.80 10.94 17.58 51.98 17.04 48.39 5.81 7.65 4.35 57 ER2a ExonRegion 0 80.69 92.26 286.39 117.51 38.39 62.24 81.03 240.93 99.14 238.53 47.45 22.18 64.70 115.58 162.29 97.35 166.46 539.96 244.56 341.60 456.57 183.90 186.27 58 E2_Da KnownBoundary 0 56.08 59.20 102.89 53.34 29.54 16.35 52.55 99.81 34.20 97.13 19.74 12.75 0.00 23.78 5.56 36.06 38.62 180.90 132.62 135.38 213.38 66.32 71.62 59 E2a_E2b NovelJunction 0 27.63 36.38 234.32 120.33 8.40 13.29 46.72 184.13 89.87 229.40 23.16 7.05 0.00 8.30 29.54 44.52 89.95 385.81 117.27 210.73 250.63 69.13 63.85 60 E2_Ab KnownBoundary 0 3.70 11.25 43.20 21.08 4.07 0.00 2.21 53.07 34.00 61.81 9.74 0.00 0.00 14.30 11.99 18.46 32.26 120.63 34.64 67.11 75.06 44.46 22.79 61 ER2b ExonRegion 0 55.03 66.09 238.95 104.26 21.41 31.17 52.96 210.01 94.49 213.90 46.39 17.32 14.07 82.83 108.80 83.22 110.58 423.13 183.16 240.42 355.90 130.22 98.38 62 ER2c ExonRegion 0 12.22 34.10 80.21 33.73 14.29 27.60 41.76 78.14 34.60 77.03 13.37 7.29 16.24 33.55 51.86 34.64 37.52 202.04 77.19 90.41 106.93 78.38 59.50 63 E2_Db KnownBoundary 0 75.94 63.87 8.54 15.25 23.34 24.87 66.46 12.03 9.00 8.78 2.68 5.40 7.79 4.53 0.00 4.36 22.53 20.44 27.20 9.33 16.56 22.35 7.94 64 E2_Dc KnownBoundary 0 41.19 89.59 24.95 7.33 11.88 5.68 29.28 18.07 7.38 13.22 4.84 0.00 0.00 4.77 10.63 7.52 11.69 8.75 9.22 15.60 19.52 2.94 3.76 65 ER2d ExonRegion 0 48.08 64.35 0.00 1.36 7.26 16.11 53.24 1.73 1.24 1.15 0.00 2.78 0.00 1.74 5.80 2.97 0.00 1.19 0.00 2.13 2.20 6.70 2.94 66 ER2e ExonRegion 0 58.06 53.52 0.00 0.22 2.07 4.44 9.60 0.69 0.45 0.98 0.00 0.00 0.11 0.00 1.19 1.99 0.00 1.57 3.19 0.70 1.73 0.40 0.50 67 E2_Dd KnownBoundary 0 68.31 47.75 22.77 18.05 28.10 10.33 4.28 10.19 2.63 16.98 2.53 0.00 0.00 0.00 0.00 7.95 4.39 41.83 36.61 21.80 43.55 16.96 12.55 68 E2d_E2c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 69 ER2f ExonRegion 0 6.74 2.40 2.08 1.60 0.94 1.29 2.44 5.65 2.59 1.98 0.34 0.00 0.69 1.08 1.62 1.57 0.00 2.67 2.59 2.24 6.08 2.19 0.77 70 E2_Ac KnownBoundary 0 13.11 19.27 1.33 4.33 3.48 7.10 7.07 1.60 0.00 1.10 1.84 0.00 18.34 4.47 0.00 18.80 0.00 1.78 15.91 7.67 12.97 7.90 17.58 71 ER2g ExonRegion 0 18.82 15.93 15.35 9.09 8.97 10.28 13.36 37.53 13.41 15.33 3.25 0.00 17.63 4.50 8.70 8.33 1.85 16.97 8.93 17.89 7.39 14.01 4.94 72 ER2h ExonRegion 0 0.00 2.03 0.00 1.36 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 0.00 2.20 0.00 0.00