Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HINT2 Gene 0 21.81 10.35 40.98 12.54 16.52 19.37 16.92 25.56 23.67 30.06 38.40 19.11 15.53 48.02 78.13 38.99 48.71 33.30 48.23 25.24 19.85 10.92 11.32 2 474848 Transcript 0 0.35 0.00 0.00 0.00 1.34 0.00 0.00 0.00 0.00 0.38 0.00 0.00 0.00 0.00 0.48 0.00 0.00 0.31 0.00 0.00 0.00 0.00 0.00 3 474908 Transcript 0 27.97 10.63 13.68 5.45 8.59 22.18 15.13 7.47 6.42 9.78 13.86 8.79 3.39 19.14 42.35 30.11 18.39 13.21 35.24 13.22 5.42 1.20 5.83 4 461169 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 259667 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 472085 Transcript 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 3.24 0.00 0.00 0.00 0.00 0.00 0.00 7.69 4.77 6.26 0.00 2.68 0.00 0.00 0.00 7 490578 Transcript 0 7.08 8.89 17.49 8.12 4.77 4.47 7.25 29.12 18.88 14.79 6.15 5.27 4.75 12.62 19.08 19.13 10.16 16.32 22.30 14.29 1.07 4.17 1.36 8 471774 Transcript 0 0.00 0.00 0.00 0.00 0.00 14.08 0.00 0.00 1.48 1.40 4.95 0.00 7.95 0.00 0.00 4.36 0.00 0.00 4.80 0.00 0.00 3.12 0.00 9 ER1a ExonRegion 0 0.71 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.76 0.00 0.00 0.00 0.00 0.97 0.00 0.00 0.62 0.00 0.00 0.00 0.00 0.00 10 ER1b ExonRegion 0 0.69 1.23 0.59 0.00 0.98 2.15 1.58 0.83 0.24 1.33 1.62 0.00 0.22 1.73 2.63 0.67 2.12 2.28 2.78 1.34 0.19 0.00 0.07 11 E1_Da KnownBoundary 0 3.78 5.39 2.69 0.00 3.14 2.67 6.58 0.00 0.00 1.58 0.00 0.00 0.00 4.18 10.75 0.00 4.77 5.80 0.00 0.00 0.00 0.00 0.00 12 E1a_E1e KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1_Ac KnownBoundary 0 20.97 8.81 8.34 0.00 11.54 53.61 19.52 1.89 1.79 3.01 7.74 0.00 0.00 17.95 108.41 27.43 16.92 18.36 46.87 9.27 5.81 2.33 19.21 14 ER1c ExonRegion 1 53.08 15.33 23.75 2.52 9.67 56.42 31.06 9.17 6.08 11.82 31.97 0.33 4.69 38.60 102.44 69.04 42.40 21.60 84.78 28.15 12.88 0.48 15.36 15 E1_Ad KnownBoundary 1 194.18 65.98 111.14 32.66 91.85 199.77 159.96 61.24 46.76 63.64 173.99 6.30 6.82 121.20 349.47 261.13 186.82 228.24 318.79 94.53 85.62 28.96 117.89 16 ER1d ExonRegion 1 104.29 36.18 49.52 6.72 35.89 129.50 85.78 24.20 13.97 24.64 101.24 4.33 5.50 90.89 291.63 155.47 107.68 25.87 194.97 60.53 52.36 13.08 66.13 17 ER1e ExonRegion 1 45.58 15.15 45.33 8.37 13.58 40.42 38.75 17.56 14.74 23.86 57.47 0.61 4.99 33.01 93.93 44.45 73.72 13.39 74.56 18.99 29.15 16.56 28.51 18 E1_Db KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 1.02 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 3.13 0.00 0.00 0.00 19 E1b_E1e KnownJunction 1 6.67 3.29 40.89 6.46 3.23 2.90 9.01 3.78 16.06 19.61 24.85 0.00 6.82 42.79 42.28 7.35 74.71 8.71 43.20 17.77 24.28 0.00 0.00 20 ER1f ExonRegion 0 12.64 6.30 5.62 4.33 9.30 4.28 6.86 5.60 5.21 7.97 4.46 15.77 5.04 6.68 7.47 6.00 5.37 4.48 5.86 4.53 0.54 0.47 0.27 21 E1_Ae KnownBoundary 0 7.56 3.35 2.54 7.09 0.00 0.00 1.68 7.02 8.91 3.17 0.00 0.00 0.00 2.47 23.12 3.16 3.83 1.53 0.00 0.00 0.00 2.27 0.00 22 E1_Af KnownBoundary 1 33.86 14.27 60.44 14.82 11.12 0.00 16.12 38.45 27.60 44.35 93.18 6.30 25.97 48.62 83.32 31.10 140.16 20.93 43.86 60.72 47.75 8.51 3.93 23 ER1g ExonRegion 1 26.46 12.20 59.17 21.22 7.64 1.83 11.92 41.11 31.94 44.24 87.53 8.66 21.78 70.65 107.76 22.93 139.11 24.55 51.65 49.09 48.80 7.29 2.94 24 ER1h ExonRegion 1 48.60 19.67 130.70 37.52 23.69 25.24 19.20 84.26 66.09 112.85 204.23 33.61 27.71 149.83 271.00 99.88 212.86 121.03 155.58 106.41 95.92 27.06 36.09 25 E1_Ag KnownBoundary 0 70.23 15.98 198.93 62.86 46.60 42.48 41.65 96.73 87.64 169.58 205.42 68.57 53.24 188.89 556.15 286.76 227.40 204.82 379.87 129.50 122.26 42.43 90.40 26 ER1i ExonRegion 0 54.86 25.38 182.90 50.15 51.05 45.29 48.30 95.62 98.78 154.63 155.37 36.89 43.71 227.60 460.20 243.71 149.27 270.51 262.54 95.32 73.38 51.92 112.00 27 E1_Dc KnownBoundary 0 35.12 11.18 3.19 11.69 0.00 4.77 18.77 5.91 7.78 11.39 7.84 12.60 0.00 16.48 15.20 18.88 0.00 16.25 12.89 2.94 0.00 0.00 4.35 28 E1c_E1h KnownJunction 0 26.00 23.88 213.48 42.55 87.78 48.49 59.88 107.00 112.30 139.17 137.56 43.51 27.60 247.04 332.90 246.60 154.93 304.27 280.01 83.67 64.62 66.25 129.41 29 E1c_E1i KnownJunction 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 3.24 0.00 0.00 0.00 0.00 0.00 0.00 7.69 4.77 6.26 0.00 2.68 0.00 0.00 0.00 30 ER1j ExonRegion 0 18.18 10.25 11.65 9.50 6.79 5.85 7.48 7.64 7.96 9.56 5.15 10.25 0.44 12.14 17.13 15.30 7.40 13.56 15.09 6.99 2.83 2.65 1.85 31 E1_Ah KnownBoundary 0 6.89 5.46 12.27 9.86 3.82 12.89 14.75 1.89 5.21 6.53 6.84 0.00 0.00 14.77 25.96 7.60 9.07 3.98 8.75 11.51 6.05 2.94 0.00 32 E1_Ai KnownBoundary 0 34.01 20.85 188.02 44.08 133.19 91.48 78.39 119.53 109.08 131.25 178.68 74.12 97.56 149.63 256.01 141.76 190.65 201.13 105.98 137.17 97.67 41.88 37.73 33 ER1k ExonRegion 0 26.60 18.17 186.58 50.65 96.33 69.75 67.04 109.30 107.08 137.55 160.95 53.54 56.28 194.08 261.98 189.23 178.25 249.88 172.43 115.60 81.98 53.41 77.72 34 ER1l ExonRegion 0 18.05 24.73 196.80 54.48 94.74 158.67 98.62 111.53 109.98 144.35 179.55 78.40 85.05 269.10 395.98 158.97 233.47 155.61 205.03 124.78 109.20 54.28 30.72 35 E1_Dd KnownBoundary 0 9.93 15.66 26.64 9.32 3.57 11.98 15.55 19.59 22.37 14.56 2.68 6.30 7.63 12.36 8.90 7.09 4.49 14.47 20.89 8.69 0.00 3.12 0.00 36 E1d_E1j KnownJunction 0 0.00 0.00 0.00 0.00 0.00 14.08 0.00 0.00 1.48 1.40 4.95 0.00 7.95 0.00 0.00 4.36 0.00 0.00 4.80 0.00 0.00 3.12 0.00 37 E1d_E1k KnownJunction 1 6.67 18.62 231.84 38.29 65.62 131.52 112.88 135.54 112.27 146.88 214.00 50.42 62.82 243.92 294.83 124.92 315.01 90.00 121.42 96.13 127.26 53.70 32.44 38 ER1m ExonRegion 0 7.08 8.89 17.49 8.12 4.77 4.47 7.25 29.12 18.88 14.79 6.15 5.27 4.75 12.62 19.08 19.13 10.16 16.32 22.30 14.29 1.07 4.17 1.36 39 E1_Aj KnownBoundary 0 10.37 0.00 10.73 7.82 0.00 4.83 6.27 26.37 12.76 13.46 2.37 0.00 6.82 21.01 30.66 15.04 8.04 24.58 43.20 19.49 2.78 4.90 4.01 40 E1_Ak KnownBoundary 0 10.15 2.89 19.22 5.96 7.89 21.35 0.00 9.73 19.10 6.80 19.27 0.00 0.00 24.72 35.11 15.30 9.26 9.66 7.81 15.34 0.00 0.00 3.84 41 ER1n ExonRegion 0 4.31 1.54 25.06 8.74 6.64 22.95 6.57 23.90 23.51 17.72 23.66 1.79 9.87 33.49 42.92 21.42 20.83 25.23 34.27 19.00 5.70 5.10 4.66 42 ER1o ExonRegion 0 33.39 31.86 212.50 43.48 30.36 64.06 55.05 117.56 121.26 156.31 196.11 53.88 60.58 240.10 363.34 145.76 239.96 104.81 169.97 109.60 110.74 55.16 46.09 43 E1_De KnownBoundary 0 34.97 11.91 51.27 13.09 3.06 20.84 5.61 27.48 37.73 48.97 23.01 6.15 6.66 41.97 36.84 41.27 56.29 41.20 55.44 44.04 19.95 9.31 3.76 44 E1e_E1l KnownJunction 0 56.97 19.14 158.07 39.92 7.81 0.00 12.14 97.59 72.71 123.67 119.77 69.77 95.45 205.25 314.11 129.28 105.47 63.76 203.77 99.71 76.23 110.89 42.08 45 ER1p ExonRegion 0 25.43 13.97 44.70 17.73 11.32 24.40 10.01 40.83 42.57 27.30 28.37 4.83 2.79 36.63 36.47 50.03 62.06 39.76 48.89 35.13 11.55 13.34 8.57 46 E1_Al KnownBoundary 0 7.26 12.83 26.37 9.86 0.00 13.00 6.54 18.03 36.98 22.67 19.11 6.30 6.33 21.96 15.08 41.87 25.15 20.73 50.73 17.32 10.38 12.31 8.45 47 ER1q ExonRegion 0 41.92 20.96 152.08 41.33 10.36 17.36 19.58 91.30 81.86 93.71 123.21 72.62 71.86 151.70 233.64 116.92 166.91 92.92 154.90 94.82 79.87 68.25 22.55 48 E1_Df KnownBoundary 0 146.25 34.01 164.99 47.31 56.11 24.59 26.01 79.64 71.53 58.02 136.98 63.17 91.88 91.41 235.74 108.01 234.88 125.44 191.44 75.87 83.77 46.66 35.51 49 ER1r ExonRegion 0 89.26 20.76 107.69 28.63 59.33 38.24 40.18 53.96 46.50 43.33 74.02 51.64 76.33 151.49 243.60 105.01 124.83 73.21 141.94 39.04 49.37 24.37 24.62 50 ER1s ExonRegion 0 62.52 10.79 46.00 18.77 16.47 20.17 21.69 24.46 19.86 15.53 18.73 2.00 5.05 42.23 90.16 45.04 33.01 22.17 75.47 17.68 5.76 8.98 12.65 51 ER1t ExonRegion 0 2.12 2.03 0.00 1.36 0.00 0.00 2.65 5.19 1.24 1.15 0.00 0.00 0.00 6.50 14.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00