Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MCART1 Gene 0 22.33 30.29 34.99 21.88 22.44 25.40 27.95 32.40 35.40 43.10 40.99 28.41 38.75 40.41 39.92 45.06 39.69 49.63 34.73 31.78 27.82 19.19 30.27 2 496760 Transcript 0 9.90 14.56 16.37 9.15 8.99 11.81 11.88 16.57 14.60 29.32 38.75 16.94 26.96 34.46 43.29 33.92 30.46 42.93 33.46 17.20 25.30 12.67 12.85 3 242275 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 377716 Transcript 0 10.52 18.11 14.20 7.66 10.14 24.41 19.39 10.45 13.75 18.69 18.69 4.51 17.07 19.53 16.35 34.85 28.71 24.24 28.93 8.83 9.32 10.57 18.95 5 IG18 Intergenic 0 2.89 12.91 8.91 2.84 2.60 6.68 4.53 4.42 5.35 3.82 0.08 0.62 0.32 0.95 2.95 0.03 0.35 27.03 16.30 8.40 7.68 4.28 7.52 6 IG18_AR5 ActiveIntergenicRegion 0 4.52 11.39 8.18 1.24 2.72 7.28 5.93 6.81 11.98 5.57 0.00 0.00 0.39 3.13 7.59 0.00 1.01 51.31 34.04 15.17 15.91 8.06 17.34 7 IG18_AR4 ActiveIntergenicRegion 0 4.95 18.35 14.38 6.11 4.51 10.91 8.87 7.68 9.15 7.41 0.00 0.08 0.48 2.16 6.58 0.00 0.14 50.22 26.45 14.96 14.15 9.30 12.37 8 IG18_SR3 SilentIntergenicRegion 0 1.69 11.39 2.70 2.18 0.00 7.70 11.39 9.68 2.47 1.84 0.00 0.00 0.00 0.00 1.16 0.00 0.00 14.04 24.85 4.26 2.64 0.00 0.00 9 IG18_AR3 ActiveIntergenicRegion 0 2.33 14.71 8.84 1.58 1.73 8.63 4.81 4.43 4.65 4.09 0.00 0.08 0.10 0.28 1.13 0.00 0.00 29.61 17.98 9.21 6.64 2.86 7.42 10 IG18_AR2 ActiveIntergenicRegion 0 2.54 42.29 25.14 5.23 7.83 10.55 5.83 6.53 10.72 4.53 0.00 0.00 0.00 0.37 0.99 0.00 0.00 37.11 26.07 11.26 6.70 4.18 8.40 11 IG18_AR1 ActiveIntergenicRegion 0 3.26 3.07 4.66 2.38 1.43 3.11 2.10 2.76 2.25 1.88 0.53 3.14 1.06 0.95 2.44 0.33 2.35 6.51 2.44 3.61 8.32 2.39 4.66 12 ER1a ExonRegion 0 3.54 5.24 6.09 2.81 10.50 24.49 16.13 0.00 3.17 9.69 8.94 0.00 0.89 7.02 11.96 7.34 12.95 15.35 16.09 7.80 3.93 1.76 5.16 13 E1_Ab KnownBoundary 0 0.00 2.57 22.53 6.86 0.00 2.21 6.01 2.18 4.75 20.12 7.21 0.00 0.00 22.43 14.09 20.59 0.00 33.49 30.49 30.17 5.56 6.12 11.87 14 E1_Ac KnownBoundary 0 0.00 11.97 13.31 1.70 0.00 0.00 12.28 4.23 7.67 11.98 8.42 0.00 0.00 19.48 28.06 27.34 17.58 44.85 13.27 12.21 11.86 2.76 22.79 15 ER1b ExonRegion 0 2.48 8.40 21.31 5.93 0.70 2.15 9.90 1.43 8.70 16.75 6.98 0.00 0.00 25.92 24.47 26.75 10.62 33.58 26.45 21.28 10.92 2.90 18.90 16 ER1c ExonRegion 0 18.44 25.13 18.96 6.13 13.00 58.07 26.73 26.75 22.11 34.87 23.01 0.00 6.14 36.00 27.56 61.78 36.62 47.69 28.52 28.72 33.16 27.33 72.51 17 E1_Da KnownBoundary 0 2.82 0.00 0.00 1.43 0.00 5.79 0.00 0.00 0.00 1.67 0.00 0.00 0.00 0.00 0.00 7.95 4.68 5.14 0.00 2.94 0.00 0.00 0.00 18 E1a_E2a KnownJunction 0 30.67 35.65 20.02 12.15 26.57 102.78 37.71 50.40 34.03 62.19 30.48 6.60 6.66 36.49 19.28 68.87 47.31 55.05 27.20 38.03 34.29 48.62 85.02 19 ER1d ExonRegion 0 1.70 3.74 7.24 2.62 2.75 5.04 4.52 4.28 7.94 8.14 12.87 1.98 6.14 8.01 9.44 11.50 20.27 17.52 6.85 5.90 6.76 1.86 7.65 20 E1b_E2a KnownJunction 0 14.37 6.18 16.03 7.56 17.32 46.45 38.38 14.62 15.13 33.68 33.90 6.30 32.30 41.38 31.40 59.47 63.67 47.51 62.12 12.40 15.44 15.37 34.40 21 I1_AR1 ActiveIntronRegion 0 4.49 15.58 13.26 12.45 11.19 4.04 8.66 9.88 8.21 7.85 0.00 5.14 6.67 0.18 2.73 0.49 1.81 2.64 3.67 6.82 0.36 2.71 1.68 22 ER2a ExonRegion 0 23.84 29.72 44.68 29.73 47.09 122.67 77.39 57.28 60.75 95.00 106.02 45.10 69.85 56.19 56.65 84.73 119.43 71.40 79.01 47.21 47.05 41.38 71.08 23 E2_Da NovelBoundary 0 0.00 0.00 9.79 14.72 12.65 0.00 15.10 3.70 4.40 1.45 0.00 6.30 0.00 2.47 5.69 0.00 19.07 0.00 18.82 6.39 0.00 0.00 0.00 24 E2a_E3a KnownJunction 1 14.89 5.85 45.98 24.97 25.47 32.14 27.16 55.41 41.90 74.54 81.39 31.36 106.65 31.61 13.35 52.21 51.05 43.07 11.95 30.74 40.22 8.02 46.35 25 E2a_E4a KnownJunction 0 0.00 8.88 16.03 9.32 0.00 5.45 1.99 20.04 14.50 39.43 58.49 23.71 26.46 49.74 80.85 46.65 65.64 43.11 40.00 18.15 29.10 14.02 3.50 26 E3_Aa NovelBoundary 1 10.00 2.96 2.93 0.00 4.33 8.06 10.07 5.91 18.08 3.33 2.58 0.00 26.62 10.30 0.00 15.38 9.16 10.94 8.66 3.20 0.00 0.00 14.08 27 ER3a ExonRegion 0 16.95 48.59 58.63 36.73 29.75 29.71 36.03 57.12 58.84 66.08 57.13 58.07 71.60 63.74 45.85 66.43 62.87 66.84 32.70 57.56 44.31 33.45 53.81 28 E3_Da KnownBoundary 1 36.60 154.84 63.75 45.62 30.73 57.98 50.17 39.64 58.74 45.64 16.27 12.60 35.55 28.78 38.32 76.05 4.77 23.34 44.24 24.35 17.85 35.27 38.93 29 ER3b ExonRegion 1 15.49 44.39 19.32 12.82 10.36 21.73 15.27 12.43 18.19 14.25 9.29 5.25 12.77 9.19 8.21 33.58 2.18 7.71 17.82 8.19 5.77 14.50 14.81 30 E3_Db NovelBoundary 1 2.96 106.10 20.16 26.90 29.54 24.47 20.27 36.80 37.90 31.21 48.01 18.76 19.48 42.91 14.83 11.45 55.63 12.27 21.08 30.68 12.11 35.58 43.71 31 I3_SR1 SilentIntronRegion 0 2.42 7.74 9.73 10.44 6.11 8.03 7.55 14.70 17.86 18.22 11.77 9.55 7.72 7.71 9.06 20.93 13.19 20.29 10.30 9.72 7.11 5.15 16.21 32 I3 Intron 0 56.68 57.40 45.27 35.61 63.21 46.00 64.14 53.29 52.44 55.73 37.67 46.84 49.46 32.18 42.55 28.79 28.74 21.70 20.89 43.52 14.23 33.09 34.50 33 I3_AR3 ActiveIntronRegion 0 61.11 61.28 48.75 38.17 68.06 49.50 68.74 57.24 56.20 59.73 40.58 50.18 53.26 34.66 45.56 30.96 30.82 23.09 22.20 46.23 15.37 35.54 37.19 34 ER4a ExonRegion 0 6.63 9.60 15.06 6.38 7.16 3.56 5.70 19.74 16.36 34.95 54.65 14.70 25.67 47.09 49.45 45.42 29.68 52.08 32.02 19.34 26.27 17.38 20.58 35 E4_Da NovelBoundary 1 261.90 66.57 214.07 174.27 86.59 54.34 106.12 206.56 166.84 213.63 30.38 0.00 8.12 3.00 60.33 76.73 174.29 190.48 54.59 80.09 66.78 41.21 67.27 36 E4a_E5a KnownJunction 0 0.00 15.06 8.34 3.23 0.00 2.38 3.80 11.21 2.92 18.35 30.27 21.61 45.94 26.49 22.25 23.93 12.90 48.46 31.72 11.95 39.35 12.86 11.52 37 I4 Intron 0 10.55 13.57 10.24 9.58 15.96 7.18 13.79 10.77 8.02 5.48 2.41 4.03 9.04 2.52 6.17 6.08 3.82 5.15 3.69 7.76 0.59 1.85 3.66 38 I4_SR1 SilentIntronRegion 0 10.55 13.57 10.24 9.58 15.96 7.18 13.79 10.77 8.02 5.48 2.41 4.03 9.04 2.52 6.17 6.08 3.82 5.15 3.69 7.76 0.59 1.85 3.66 39 E5_Aa NovelBoundary 0 0.00 16.38 4.20 4.73 4.33 0.00 4.33 3.98 6.77 2.85 10.06 0.00 0.00 0.00 6.30 4.19 3.65 6.63 0.00 9.14 0.00 6.25 4.01 40 ER5a ExonRegion 0 39.31 34.05 36.34 23.99 27.28 23.19 31.78 31.86 36.03 44.16 41.39 24.69 35.85 41.97 51.95 46.26 31.11 55.64 47.48 28.76 27.88 17.31 23.48