Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GLIPR2 Gene 0 136.06 10.32 64.57 13.52 37.93 34.56 23.22 35.86 30.43 26.10 2.29 3.86 2.65 6.13 2.31 2.71 6.87 26.47 1.16 43.29 203.33 75.55 65.32 2 396614 Transcript 0 0.00 0.00 0.61 0.00 0.80 0.55 0.00 0.00 0.86 0.00 0.00 0.00 0.00 0.32 0.00 0.00 0.00 0.37 0.00 0.85 2.64 0.00 0.00 3 377949 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 396613 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 497814 Transcript 0 11.22 0.00 0.12 0.14 1.34 6.60 0.13 0.86 1.36 1.95 0.00 0.00 0.00 0.00 0.29 0.00 0.99 4.43 0.00 1.91 20.49 2.50 6.46 6 377959 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 377960 Transcript 0 8.20 0.00 0.15 1.02 0.00 2.75 0.99 1.94 1.24 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.92 0.00 1.33 5.51 0.00 2.57 8 474050 Transcript 0 5.48 0.45 2.56 0.89 1.56 0.73 1.73 2.16 3.24 2.02 0.06 1.35 1.60 1.04 0.57 0.25 0.05 2.22 0.05 7.39 7.85 3.52 4.13 9 ER1a ExonRegion 0 0.00 0.00 0.61 0.00 0.80 0.55 0.00 0.00 0.86 0.00 0.00 0.00 0.00 0.32 0.00 0.00 0.00 0.37 0.00 0.85 2.64 0.00 0.00 10 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E4_Aa NovelBoundary 0 3.78 0.00 0.00 0.00 0.00 2.61 2.25 0.00 1.74 2.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.52 0.00 6.46 3.15 3.12 0.00 13 E4_Ac NovelBoundary 0 11.71 0.00 8.84 4.46 0.00 17.60 8.70 0.00 2.55 4.73 0.00 0.00 0.00 0.00 5.93 0.00 0.00 17.49 0.00 13.93 55.97 5.63 34.91 14 ER4a ExonRegion 0 11.22 0.00 0.12 0.14 1.34 6.60 0.13 0.86 1.36 1.95 0.00 0.00 0.00 0.00 0.29 0.00 0.99 4.43 0.00 1.91 20.49 2.50 6.46 15 ER4b ExonRegion 0 38.10 0.00 1.23 1.36 8.03 12.84 3.97 4.61 3.71 3.44 0.00 0.00 0.00 0.00 2.90 0.00 3.30 12.93 0.00 8.51 67.58 12.50 20.56 16 ER4c ExonRegion 0 148.52 3.05 17.13 3.44 22.69 44.81 21.10 13.98 16.11 7.93 1.22 0.00 1.73 0.39 6.75 5.43 12.27 34.02 0.76 43.99 269.14 50.91 137.19 17 E4a_E7a KnownJunction 0 337.76 6.58 36.63 7.79 43.21 94.09 44.03 30.97 38.43 16.60 2.68 6.15 6.66 2.24 8.90 17.60 22.53 65.66 3.95 63.98 445.72 95.34 246.87 18 I4_AR6 ActiveIntronRegion 0 15.62 0.56 6.34 2.14 4.18 2.58 2.26 1.75 7.36 5.55 0.00 1.32 0.36 0.69 0.44 0.55 0.61 9.53 0.00 17.63 27.48 9.83 16.31 19 E5_Aa NovelBoundary 0 19.78 0.00 4.38 2.70 28.78 0.00 4.50 3.90 12.67 9.78 2.32 0.00 0.00 0.00 0.00 4.36 4.68 2.57 0.00 21.86 17.36 23.09 11.18 20 ER5a ExonRegion 0 19.73 0.82 7.90 1.63 6.24 2.93 4.32 6.18 7.60 7.16 0.26 3.66 2.63 0.91 0.27 0.99 0.22 7.52 0.21 16.29 19.50 13.04 13.69 21 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER6a ExonRegion 0 2.18 1.00 0.55 1.93 0.00 0.00 2.58 2.44 5.38 0.92 0.00 1.75 3.79 3.25 2.01 0.00 0.00 1.35 0.00 10.64 11.91 1.02 2.82 23 E6a_E7a KnownJunction 0 0.00 0.00 1.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.62 0.00 0.00 0.00 24 ER7a ExonRegion 0 98.84 1.64 42.52 4.45 19.05 23.65 15.00 19.89 28.58 16.03 0.98 3.69 2.88 5.24 1.84 6.24 13.63 50.13 2.66 39.94 260.24 40.52 67.89 25 E7a_E8a KnownJunction 0 34.90 0.00 69.34 3.23 11.38 12.55 7.33 21.44 41.26 30.38 5.00 7.05 0.00 4.59 0.00 3.25 23.75 40.54 0.00 62.13 489.89 29.64 34.49 26 ER8a ExonRegion 0 40.80 5.04 78.86 10.42 21.35 15.68 12.20 36.58 44.93 28.17 4.98 3.33 1.89 7.45 8.37 8.23 13.90 57.48 1.32 69.03 408.36 85.04 159.14 27 E8a_E9a KnownJunction 0 64.75 8.68 68.06 11.35 23.26 18.74 16.08 42.47 53.82 41.66 4.47 5.40 0.00 20.13 5.69 11.54 3.46 86.51 3.67 66.73 282.08 101.28 126.85 28 E8a_E10a KnownJunction 0 2.74 0.00 5.50 1.33 0.00 0.00 2.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.62 2.53 0.00 3.84 29 ER9a ExonRegion 0 54.72 6.85 74.11 12.01 27.15 43.26 20.79 43.28 45.24 35.47 7.16 2.08 0.00 17.14 0.32 7.27 8.31 83.97 0.94 61.70 360.02 118.76 120.62 30 ER9b ExonRegion 0 74.08 7.26 81.86 14.19 46.06 98.31 35.18 42.03 40.40 38.43 5.53 7.89 1.56 9.74 0.40 5.24 17.22 60.50 0.00 75.09 537.96 90.41 99.15 31 E9b_E10a KnownJunction 0 105.50 9.01 89.12 17.15 36.08 119.08 42.35 47.97 50.93 43.19 7.37 24.91 6.49 7.30 4.70 8.37 14.31 41.66 0.00 76.64 633.47 60.56 107.05 32 I9_AR1 ActiveIntronRegion 0 8.97 1.55 11.32 3.25 4.07 2.42 2.16 5.64 6.32 4.28 0.13 1.73 0.92 0.64 0.14 0.62 2.06 10.33 0.00 11.25 22.50 8.38 14.85 33 ER10a ExonRegion 0 252.54 23.25 113.15 25.56 68.88 66.88 51.56 61.79 54.10 47.64 5.98 3.30 3.54 11.40 3.91 2.46 10.66 45.61 1.22 79.81 385.42 144.42 116.61 34 E10_Ab KnownBoundary 0 290.05 47.03 77.32 18.48 160.36 114.99 82.98 46.41 42.27 42.36 0.00 0.00 6.82 4.83 0.00 4.36 9.44 8.42 0.00 52.80 52.82 103.18 39.44 35 E10_Da KnownBoundary 0 171.96 6.58 149.91 46.55 122.33 62.69 34.01 54.01 60.33 46.23 2.16 6.30 0.00 9.65 0.00 0.00 0.00 9.33 0.00 23.97 54.92 78.32 37.39 36 ER10b ExonRegion 0 239.17 25.42 157.39 43.61 153.56 107.48 63.18 74.61 74.52 60.47 1.61 4.81 3.91 8.39 0.00 2.97 7.52 16.01 0.00 49.53 70.15 116.68 50.90 37 ER10c ExonRegion 0 202.82 14.16 93.34 19.54 54.47 45.07 27.03 52.05 37.43 33.63 1.87 4.86 2.42 7.71 2.56 3.28 8.79 25.58 1.99 45.79 229.45 100.71 71.53 38 ER10d ExonRegion 0 28.04 2.20 12.56 4.54 4.24 11.00 3.97 8.50 4.94 2.87 1.77 0.00 1.56 0.00 2.90 0.00 0.00 3.54 0.00 9.93 37.65 8.16 8.81 39 ER10e ExonRegion 0 19.05 0.00 4.90 1.36 1.78 9.78 3.09 4.03 2.88 1.15 0.00 0.00 0.00 0.00 1.93 0.00 0.00 1.85 0.00 7.09 13.96 0.00 6.85 40 ER10f ExonRegion 0 8.20 0.00 0.15 1.02 0.00 2.75 0.99 1.94 1.24 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.92 0.00 1.33 5.51 0.00 2.57 41 IG42_AR2 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 1.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.87 13.51 2.84 0.67