Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 EXOSC3 Gene 0 48.41 52.77 44.48 36.26 53.51 27.70 61.63 49.58 44.56 97.05 86.65 88.01 59.30 105.35 121.83 66.89 81.84 31.57 42.06 64.32 23.97 43.76 28.07 2 482614 Transcript 0 0.63 0.00 0.55 0.00 0.00 0.01 0.01 0.01 0.05 0.47 2.33 0.00 0.00 1.60 4.70 0.89 3.96 1.93 2.64 1.28 0.04 0.63 0.00 3 489414 Transcript 0 0.10 4.80 0.00 0.00 0.00 0.00 0.00 0.00 2.09 0.16 0.02 0.00 0.00 0.00 2.97 3.01 0.00 0.02 0.00 5.55 0.03 0.02 0.00 4 396521 Transcript 0 7.41 0.51 1.23 0.00 1.34 1.83 1.99 1.30 0.93 0.29 6.28 0.00 0.00 10.15 17.41 3.72 4.95 6.01 1.59 4.26 7.16 0.52 0.00 5 465229 Transcript 0 22.27 12.56 9.26 9.12 14.86 6.55 12.72 11.32 8.80 10.90 4.57 8.86 12.63 10.57 11.96 13.20 8.61 5.11 9.54 9.65 5.96 6.23 11.06 6 327304 Transcript 1 29.64 41.31 45.43 62.57 71.10 41.02 81.50 72.80 81.80 131.10 12.40 74.08 60.78 21.83 25.15 21.00 8.93 19.24 33.63 80.02 2.87 48.24 16.36 7 496910 Transcript 0 2.17 0.15 0.00 1.14 0.00 0.70 3.66 1.60 1.68 3.90 6.21 0.72 12.17 4.37 0.14 4.60 4.56 5.59 0.00 5.78 3.36 0.00 3.36 8 465860 Transcript 0 8.66 15.75 6.17 6.34 5.07 7.60 14.99 14.26 13.18 13.05 13.50 22.17 32.88 12.87 13.84 7.12 19.46 8.11 8.86 28.89 3.22 9.78 15.39 9 490516 Transcript 0 1.31 0.78 0.57 1.15 0.83 1.68 1.13 1.20 1.78 2.50 1.49 4.55 1.02 1.11 0.16 0.92 2.04 1.42 3.22 2.63 1.87 0.32 3.16 10 ER1a ExonRegion 0 1.27 0.00 1.10 0.00 0.00 0.02 0.02 0.02 0.10 0.94 4.66 0.00 0.00 3.19 3.72 1.78 3.15 3.87 0.67 2.55 0.08 1.25 0.00 11 E1_Da NovelBoundary 0 10.30 28.48 31.90 15.25 0.00 20.73 28.62 31.13 36.40 47.81 60.86 19.06 32.47 86.64 35.23 66.31 89.85 155.20 37.93 75.87 70.67 50.52 56.08 12 E1a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.69 0.00 4.77 0.00 4.61 0.00 0.00 0.00 0.00 13 ER2a ExonRegion 0 0.20 3.88 0.00 0.00 0.00 0.00 0.00 0.00 0.98 0.32 0.04 0.00 0.00 0.00 1.48 1.66 0.00 0.04 0.00 3.12 0.05 0.05 0.00 14 E2_Da NovelBoundary 1 0.00 5.66 8.75 1.40 4.33 0.00 1.72 3.98 1.59 1.58 7.58 0.00 0.00 9.59 6.30 33.32 0.00 11.94 9.22 12.72 0.00 3.00 0.00 15 E2a_E5a KnownJunction 0 0.00 5.72 0.00 0.00 0.00 0.00 0.00 0.00 3.21 0.00 0.00 0.00 0.00 0.00 4.45 4.36 0.00 0.00 0.00 7.99 0.00 0.00 0.00 16 E3_Ac NovelBoundary 0 18.00 0.00 3.43 1.47 3.82 10.45 12.81 1.81 0.00 8.46 12.21 0.00 0.00 14.89 8.90 21.79 33.38 17.53 0.00 7.80 25.14 0.00 0.00 17 ER3a ExonRegion 0 7.41 0.51 1.23 0.00 1.34 1.83 1.99 1.30 0.93 0.29 6.28 0.00 0.00 10.15 17.41 3.72 4.95 6.01 1.59 4.26 7.16 0.52 0.00 18 ER3b ExonRegion 0 11.11 2.54 1.23 0.00 5.35 1.83 4.63 5.19 1.24 1.43 14.98 0.00 0.00 30.05 37.72 8.17 10.73 12.47 7.17 7.45 9.92 2.08 0.00 19 ER3c ExonRegion 1 21.59 26.27 24.56 6.01 14.45 13.51 26.08 13.93 15.29 60.55 102.90 13.97 15.63 168.71 190.18 93.25 113.15 57.86 41.41 71.49 40.68 26.08 32.73 20 E3a_E5a KnownJunction 0 62.83 62.36 76.55 39.16 111.38 143.61 154.53 65.14 50.78 109.89 161.15 43.96 47.40 247.93 297.05 82.71 203.18 48.17 68.24 102.59 50.16 42.62 27.91 21 ER3d ExonRegion 1 32.19 28.39 49.32 25.89 63.99 86.88 77.12 44.36 34.43 81.57 108.40 45.28 24.43 170.46 193.54 48.17 151.43 42.73 46.45 63.39 31.77 25.09 17.74 22 ER4a ExonRegion 0 2.62 1.56 1.14 0.90 1.65 0.47 2.25 2.39 1.82 5.01 2.99 1.46 2.05 2.21 0.33 1.84 4.08 2.84 6.45 5.26 3.75 0.64 2.40 23 E4a_E5a KnownJunction 0 0.00 0.00 0.00 1.40 0.00 2.90 0.00 0.00 1.74 0.00 0.00 7.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.93 24 ER5a ExonRegion 0 128.23 147.49 119.51 52.26 92.60 68.34 151.28 104.74 96.08 212.63 285.04 170.55 147.92 379.33 354.36 186.85 271.51 116.68 123.55 162.47 93.58 71.49 59.79 25 E5_Da KnownBoundary 0 3.33 0.00 0.00 4.06 0.00 2.67 7.60 7.72 4.57 11.63 9.11 0.00 21.26 4.65 0.00 16.06 8.88 13.22 0.00 8.50 6.18 0.00 6.74 26 E5a_E6a KnownJunction 0 166.99 63.08 133.02 77.25 86.16 50.65 101.31 62.72 85.94 224.75 266.33 260.48 196.25 319.15 350.33 137.57 246.19 62.88 68.90 65.20 105.70 68.83 44.22 27 E5a_E7a KnownJunction 0 43.12 84.26 28.62 20.91 45.08 6.87 42.75 51.59 35.21 32.05 49.49 25.51 41.39 54.68 34.49 28.54 39.08 37.27 4.80 100.09 9.14 28.53 0.00 28 ER5b ExonRegion 0 2.17 0.15 0.00 1.14 0.00 0.70 3.66 1.60 1.68 3.90 6.21 0.72 12.17 4.37 0.14 4.60 4.56 5.59 0.00 5.78 3.36 0.00 3.36 29 I5 Intron 0 3.03 6.86 3.04 1.88 6.67 2.03 7.83 7.14 8.50 5.45 4.82 10.98 9.23 4.03 2.37 4.67 7.78 9.55 3.24 18.09 3.36 4.04 2.99 30 I5_SR1 SilentIntronRegion 0 3.47 8.63 4.35 2.42 8.17 1.64 7.49 9.20 9.87 6.11 5.04 14.07 10.85 4.78 3.23 4.43 8.85 12.59 3.32 21.71 3.77 4.81 2.19 31 E6_Aa NovelBoundary 0 0.00 9.34 3.46 1.66 15.79 4.66 8.57 18.32 14.67 6.37 4.53 12.60 6.01 9.83 4.45 16.15 8.42 11.32 4.61 31.38 5.19 0.00 16.22 32 ER6a ExonRegion 0 113.07 70.24 98.28 56.55 85.20 36.70 93.34 76.85 58.13 201.81 261.37 260.71 154.71 338.20 356.28 186.77 234.41 44.97 104.51 81.23 80.52 96.36 60.16 33 E6_Da KnownBoundary 1 3.70 17.69 12.45 5.33 7.64 5.17 24.29 20.17 21.76 15.07 14.32 12.30 20.29 9.95 23.73 7.26 41.05 7.17 8.56 30.68 5.93 19.10 25.35 34 E6a_E7a KnownJunction 0 69.72 71.17 84.41 64.69 114.35 71.04 135.89 60.58 43.29 249.31 308.45 320.20 221.90 310.79 340.19 201.83 224.40 46.68 96.38 67.88 72.09 72.44 69.57 35 ER6b ExonRegion 1 8.66 15.75 6.17 6.34 5.07 7.60 14.99 14.26 13.18 13.05 13.50 22.17 32.88 12.87 13.84 7.12 19.46 8.11 8.86 28.89 3.22 9.78 15.39 36 E6_Db NovelBoundary 0 20.45 23.48 6.06 6.13 11.71 5.22 16.34 27.23 30.01 22.75 18.79 11.25 20.29 29.96 0.00 21.53 33.57 4.23 4.80 30.55 6.12 8.94 27.32 37 I6 Intron 0 14.06 16.67 8.75 7.16 13.45 6.88 17.58 16.81 17.33 18.16 11.61 28.90 30.40 13.68 6.79 17.34 17.73 9.40 10.30 28.75 6.23 8.30 11.87 38 I6_SR1 SilentIntronRegion 0 11.45 22.20 6.94 8.75 12.56 6.32 17.55 16.94 16.62 19.23 8.63 29.77 43.12 18.14 6.09 15.56 19.36 8.85 9.58 28.93 9.15 6.10 15.88 39 I6_AR1 ActiveIntronRegion 0 16.13 19.77 7.51 7.39 13.80 11.38 12.28 26.42 16.72 22.12 14.07 29.83 31.53 17.62 6.29 21.82 21.46 17.47 8.67 36.19 9.12 9.95 13.38 40 I6_AR2 ActiveIntronRegion 0 13.10 15.19 8.02 7.52 9.05 4.68 14.71 15.45 16.08 16.83 12.99 30.86 22.85 11.19 6.59 19.73 14.95 6.58 10.85 27.02 4.05 9.45 6.33 41 I6_SR2 SilentIntronRegion 0 15.82 9.59 7.88 7.46 9.81 8.47 12.42 17.53 21.94 24.19 16.20 37.11 57.84 16.47 9.12 13.02 33.79 5.28 15.47 28.67 4.41 11.61 18.04 42 I6_AR3 ActiveIntronRegion 0 17.32 11.74 12.67 4.72 20.95 8.26 25.12 13.75 19.94 16.32 11.45 24.11 23.49 9.96 7.95 14.33 16.39 10.38 10.78 27.43 4.70 8.12 13.86 43 E7_Aa NovelBoundary 1 3.11 14.08 10.94 4.59 20.37 0.00 33.48 13.97 15.16 29.44 2.68 27.46 26.95 2.12 15.33 23.07 34.13 4.10 3.67 44.42 0.00 0.00 3.24 44 ER7a ExonRegion 0 85.85 154.25 137.08 95.64 164.43 64.92 164.14 134.82 96.40 266.45 350.96 359.23 243.07 396.83 436.46 229.96 260.99 106.23 122.83 168.51 56.91 147.35 91.74 45 E7_Da KnownBoundary 0 133.80 250.15 210.52 148.30 240.49 109.94 220.68 168.81 117.45 346.87 395.63 327.41 186.84 481.37 496.82 341.71 331.56 117.85 261.75 246.21 59.49 190.93 173.80 46 ER7b ExonRegion 0 110.39 164.70 149.73 116.79 185.25 78.36 188.43 156.24 103.12 301.95 386.92 354.68 150.90 315.95 440.31 237.25 310.28 83.87 132.54 175.52 53.90 155.09 67.47 47 E7_Db KnownBoundary 1 197.07 152.54 160.67 85.24 147.71 57.47 234.90 185.41 127.31 285.92 306.81 381.27 201.45 247.63 389.89 119.63 323.61 51.15 50.17 179.74 37.31 165.02 53.27 48 ER7c ExonRegion 0 192.25 183.72 138.28 114.68 178.77 68.07 185.04 140.33 115.84 273.65 299.58 379.96 213.62 271.60 373.33 209.64 287.26 55.41 109.71 145.62 46.93 169.09 87.40 49 E7_Dc KnownBoundary 0 110.83 134.12 90.74 82.94 123.34 55.71 109.17 75.74 73.41 173.93 167.57 156.20 96.26 133.91 219.92 100.57 87.24 21.14 68.99 81.94 20.02 109.06 28.08 50 E7_Dd KnownBoundary 1 139.88 136.62 49.55 42.79 138.29 18.63 134.87 73.73 57.96 138.20 94.92 247.13 123.86 110.19 302.37 82.71 109.86 12.39 69.37 102.01 21.25 87.81 21.08 51 ER7d ExonRegion 0 134.68 152.73 98.55 76.47 150.83 43.43 133.23 104.80 95.88 220.02 175.28 272.07 116.76 148.48 271.50 117.79 123.00 28.49 84.33 115.68 26.33 130.71 38.18 52 ER7e ExonRegion 1 55.04 83.91 48.29 60.78 78.16 41.05 93.67 78.14 82.32 149.69 37.68 101.58 57.79 47.09 77.06 38.82 43.20 22.47 27.59 88.40 9.10 57.21 19.27 53 E7_De KnownBoundary 1 32.60 61.11 37.28 59.00 67.40 40.32 105.28 71.55 88.54 151.45 25.27 115.24 73.05 19.60 30.41 34.86 46.38 9.66 51.77 117.80 15.38 71.52 32.52 54 E7e_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55 ER7f ExonRegion 1 29.64 41.31 45.43 62.57 71.10 41.02 81.50 72.80 81.80 131.10 12.40 74.08 60.78 21.83 25.15 21.00 8.93 19.24 33.63 80.02 2.87 48.24 16.36 56 E7_Df NovelBoundary 1 53.05 67.49 44.17 56.20 103.65 44.86 118.71 96.77 95.66 150.94 14.79 82.38 93.83 45.56 19.16 25.81 13.09 22.76 64.66 78.04 6.05 31.41 4.35 57 I7 Intron 0 43.29 73.29 44.46 67.62 72.97 48.88 81.01 70.71 67.63 127.57 16.09 52.86 40.23 20.61 27.21 24.47 16.96 21.12 35.55 81.20 8.19 32.47 19.51 58 I7_AR1 ActiveIntronRegion 0 37.39 47.65 32.55 50.48 65.39 50.60 81.85 58.52 67.24 119.56 14.44 49.65 28.93 23.30 14.62 25.68 21.11 16.06 38.86 65.22 9.24 30.85 14.61 59 I7_SR1 SilentIntronRegion 0 18.63 26.28 14.40 32.40 31.77 27.46 46.74 24.37 26.37 73.92 13.00 28.79 15.36 22.01 16.10 10.77 22.28 15.29 17.52 47.66 7.00 16.36 7.05 60 I7_AR2 ActiveIntronRegion 0 51.61 100.56 58.32 86.49 84.99 50.70 85.48 87.15 73.95 142.04 17.92 58.99 52.87 18.41 38.95 25.52 13.04 26.08 35.59 99.01 7.57 36.14 25.22 61 Ix Intron 0 22.22 37.81 7.67 9.73 119.50 86.93 92.51 15.46 8.28 18.97 13.91 17.55 26.65 19.89 18.23 16.94 14.85 16.01 22.93 31.25 8.59 8.75 11.45 62 Ix_SR1 SilentIntronRegion 0 22.48 38.23 7.75 9.84 120.92 87.96 93.59 15.62 8.37 19.20 14.06 17.73 26.94 20.12 18.44 17.14 15.03 16.20 23.19 31.59 8.70 8.85 11.57 63 Ix Intron 0 36.28 49.48 44.06 47.14 54.32 28.74 49.83 49.66 40.94 71.22 9.47 22.15 19.25 15.21 20.35 19.52 12.48 39.76 31.06 38.48 12.11 16.85 15.92 64 Ix_SR4 SilentIntronRegion 0 78.20 103.41 92.86 93.77 110.21 57.67 100.99 107.43 84.98 153.36 20.55 42.76 36.07 31.03 40.60 41.76 26.02 92.57 72.70 82.57 23.91 30.52 33.82 65 Ix_AR8 ActiveIntronRegion 0 32.62 62.12 52.70 65.16 67.11 37.00 63.07 54.13 48.99 82.85 8.94 17.59 22.34 14.56 21.90 12.49 6.47 39.79 27.67 38.75 9.57 21.91 13.58 66 Ix Intron 0 40.23 13.20 8.47 9.42 17.37 6.23 9.00 8.76 10.81 12.15 2.39 2.87 6.40 4.31 12.42 10.11 7.65 7.81 5.91 4.93 4.43 6.76 7.26 67 Ix_SR1 SilentIntronRegion 0 40.48 13.28 8.52 9.47 17.47 6.27 9.06 8.81 10.88 12.22 2.40 2.89 6.43 4.34 12.50 10.17 7.70 7.86 5.94 4.96 4.45 6.80 7.31 68 Ix Intron 0 50.63 24.61 20.40 22.41 27.42 7.99 13.93 20.06 14.59 17.27 5.91 12.26 11.61 9.26 12.31 15.85 7.65 7.20 11.22 11.25 5.82 10.24 10.08 69 Ix_SR1 SilentIntronRegion 0 50.91 24.73 20.52 22.53 27.54 8.04 14.01 20.17 14.67 17.37 5.94 12.32 11.67 9.31 12.37 15.94 7.69 7.24 11.29 11.31 5.86 10.30 10.13 70 Ix Intron 0 42.26 26.94 14.51 21.33 32.41 11.63 10.02 18.77 17.94 24.10 6.22 23.40 20.49 13.08 12.26 17.15 10.31 6.96 9.34 11.48 6.67 11.43 8.06 71 Ix_SR1 SilentIntronRegion 0 37.21 26.36 13.63 20.71 31.64 10.17 7.53 22.98 23.53 21.74 8.67 31.62 26.80 13.97 20.10 24.84 9.82 8.67 7.84 17.92 8.57 12.06 7.80 72 Ix_AR2 ActiveIntronRegion 0 44.60 27.27 14.94 21.66 32.83 12.31 11.15 16.96 15.51 25.20 5.15 19.83 17.75 12.72 8.82 13.80 10.55 6.23 10.03 8.65 5.85 11.19 8.20 73 E8_Aa NovelBoundary 0 37.19 17.83 88.97 60.86 35.99 23.91 25.61 73.15 62.27 73.82 2.32 18.46 13.31 0.00 5.07 27.34 4.77 66.04 22.40 31.77 18.16 16.66 27.06 74 ER8a ExonRegion 1 44.55 25.12 18.52 18.24 29.71 13.10 25.44 22.64 17.59 21.79 9.15 17.72 25.26 21.15 23.92 26.40 17.21 10.21 19.08 19.30 11.92 12.47 22.12