Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-125B21.1 Gene 0 3.08 16.51 10.95 12.51 9.71 13.65 4.90 3.86 2.40 3.31 1.75 4.21 4.00 0.78 3.19 2.08 1.10 11.75 12.43 39.40 1.87 1.48 2.52 2 416170 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.29 0.30 0.00 0.00 3 453601 Transcript 0 0.00 9.69 2.45 0.77 7.89 2.58 5.40 1.23 0.90 0.00 0.00 0.00 0.00 0.28 0.00 0.00 0.00 1.22 2.49 8.40 0.00 0.00 0.00 4 416826 Transcript 0 0.00 1.27 0.61 0.20 0.11 0.57 0.06 0.29 0.18 0.31 0.04 0.00 0.00 0.00 0.00 0.00 0.00 0.24 0.07 1.04 0.00 0.00 0.00 5 412595 Transcript 0 2.96 18.17 18.13 11.30 7.89 13.24 5.12 4.45 3.44 2.19 1.87 2.12 3.51 0.74 4.01 1.94 0.55 25.32 13.61 71.00 1.10 0.86 3.64 6 424605 Transcript 0 1.87 0.39 0.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.68 0.00 0.00 0.00 0.00 0.00 0.50 0.00 0.84 0.00 0.00 0.00 7 447278 Transcript 0 1.93 5.79 1.12 2.97 3.97 1.01 0.54 0.00 0.00 0.47 0.00 0.98 0.00 0.18 0.00 0.00 0.00 3.40 2.25 15.37 0.00 1.04 0.00 8 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.85 0.86 0.00 0.00 10 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.90 0.94 0.00 0.00 12 E3a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER4a ExonRegion 0 0.00 0.43 0.00 0.00 0.00 0.00 0.38 0.00 0.00 0.00 0.00 0.00 0.00 0.56 0.00 0.00 0.00 0.00 0.94 1.72 0.00 0.00 0.00 14 E4_Ab KnownBoundary 0 0.00 3.35 0.00 0.00 0.00 0.00 3.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER4b ExonRegion 0 0.64 2.85 1.12 0.12 1.85 0.31 2.33 0.48 0.30 0.04 0.00 0.00 0.00 0.31 0.00 0.00 0.00 0.42 0.60 3.27 0.67 0.00 0.00 16 E4a_E7a KnownJunction 0 0.00 18.94 4.91 1.53 15.79 5.17 10.42 2.46 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.45 4.05 15.08 0.00 0.00 0.00 17 ER4c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 E5_Aa NovelBoundary 0 0.00 3.09 6.68 1.73 3.65 0.00 0.00 0.00 0.00 2.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.01 0.00 0.00 0.00 19 ER5a ExonRegion 0 2.33 11.87 5.54 5.11 2.21 3.09 2.19 0.00 0.00 1.41 0.52 0.00 2.13 0.00 0.00 0.00 0.00 7.64 9.44 27.81 0.00 0.00 0.00 20 E5a_E7a KnownJunction 0 0.00 18.42 11.18 7.96 0.00 2.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.28 8.09 40.52 0.00 0.00 0.00 21 ER6a ExonRegion 0 0.64 0.78 0.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.37 0.00 0.00 0.00 0.00 0.00 1.00 0.00 1.68 0.00 0.00 0.00 22 E6a_E7a KnownJunction 0 3.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER7a ExonRegion 0 3.99 19.24 21.11 21.79 13.76 6.86 5.18 4.95 2.79 3.49 3.24 7.45 5.18 0.49 0.00 0.00 0.49 18.90 27.49 64.69 3.23 1.00 0.00 24 E7_Da NovelBoundary 0 0.00 0.00 6.62 2.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.77 6.26 3.67 29.21 0.00 0.00 0.00 25 E7a_E8a KnownJunction 0 3.19 20.92 20.79 21.58 0.00 23.51 7.99 13.55 3.94 8.49 8.05 7.50 0.00 0.00 0.00 0.00 4.77 18.20 16.38 63.41 3.15 3.12 0.00 26 ER8a ExonRegion 0 6.91 27.21 22.96 22.64 5.52 17.70 9.02 6.08 2.74 5.73 7.45 17.18 14.71 0.72 1.56 0.00 0.97 25.21 38.39 66.29 4.01 3.99 0.00 27 E8a_E9a KnownJunction 0 3.56 11.38 4.58 4.49 8.40 0.00 2.25 0.00 1.24 9.99 0.00 6.30 11.85 0.00 0.00 0.00 0.00 4.23 43.20 0.00 2.41 0.00 0.00 28 E8a_E10a KnownJunction 0 2.74 11.58 20.93 6.99 3.31 0.00 3.62 4.72 3.30 1.64 2.47 0.00 0.00 0.00 0.00 0.00 0.00 4.56 0.00 32.21 0.00 0.00 0.00 29 E8a_E11a NovelJunction 0 0.00 3.35 8.78 13.62 3.90 8.57 2.25 3.12 1.16 3.41 0.00 0.00 0.00 2.30 0.00 0.00 0.00 10.11 3.58 38.80 0.00 0.00 0.00 30 ER9a ExonRegion 0 2.17 9.86 5.16 2.17 1.31 0.02 1.20 0.00 1.07 5.63 2.98 7.28 3.17 0.64 0.57 0.83 0.46 5.74 16.29 9.76 2.52 0.00 0.41 31 ER10a ExonRegion 0 3.36 16.98 16.17 9.41 6.93 8.45 3.18 6.15 2.66 2.89 0.98 10.87 11.86 0.38 1.40 0.00 0.00 9.73 9.29 50.78 0.64 1.96 0.00 32 E10_Da NovelBoundary 0 0.00 12.37 8.72 24.21 0.00 12.49 20.84 6.08 14.90 4.84 4.84 5.85 6.49 0.00 0.00 0.00 0.00 6.01 0.00 26.27 7.97 0.00 0.00 33 E10a_E11a KnownJunction 0 3.78 25.06 26.52 6.46 8.49 20.61 8.21 7.02 3.33 3.28 0.00 7.65 13.64 0.00 0.00 0.00 4.77 11.77 4.33 55.61 0.00 2.94 0.00 34 ER11a ExonRegion 0 0.91 23.86 24.43 24.13 11.34 16.12 7.73 8.16 2.06 6.56 2.65 14.68 9.29 0.00 0.52 0.00 0.00 28.65 26.06 72.93 0.00 1.01 0.00 35 E11a_E12a KnownJunction 0 3.70 32.82 21.11 37.52 12.05 10.11 0.00 16.55 6.39 4.97 7.11 6.00 0.00 0.00 9.64 0.00 0.00 26.70 23.91 75.74 0.00 2.69 0.00 36 E12_Ab NovelBoundary 0 0.00 32.56 28.98 29.83 7.72 19.02 0.00 4.48 6.08 4.22 4.32 0.00 14.45 0.00 5.19 0.00 0.00 26.94 8.66 107.25 0.00 2.20 0.00 37 ER12a ExonRegion 0 2.12 25.35 23.98 33.83 8.41 14.60 0.43 11.73 4.94 4.83 5.80 2.63 9.05 0.00 5.80 0.00 0.00 25.14 14.45 97.19 0.00 2.08 0.00 38 ER12b ExonRegion 0 0.86 24.37 18.68 21.04 11.81 16.88 4.11 4.69 3.68 5.97 3.10 8.17 7.44 0.57 0.30 1.31 0.00 22.91 20.84 92.79 0.00 1.90 0.00 39 E12a_E13a KnownJunction 0 0.00 24.34 23.03 16.31 3.48 15.45 4.28 8.63 5.93 5.96 7.26 6.00 5.84 0.00 0.00 0.00 0.00 18.36 16.94 52.86 0.00 0.00 0.00 40 ER13a ExonRegion 0 1.11 15.00 21.04 11.57 4.78 11.92 4.92 3.41 4.72 3.99 1.58 1.17 4.19 0.56 0.05 0.00 0.00 23.41 25.12 71.50 0.00 1.38 0.05 41 E13_Da KnownBoundary 0 0.00 0.00 1.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.28 0.00 3.12 0.00 42 E13a_E14a NovelJunction 0 0.00 15.13 12.30 18.15 11.46 5.05 5.39 7.60 4.89 0.00 0.00 0.00 0.00 0.00 0.00 4.36 0.00 10.11 4.80 20.01 0.00 0.00 3.16 43 E13a_E15a KnownJunction 0 0.00 5.79 14.10 4.93 0.00 6.98 0.00 6.53 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.77 34.82 68.01 0.00 0.00 0.00 44 E13_Db KnownBoundary 0 0.00 2.57 0.00 1.80 3.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 0.00 0.00 0.00 45 E13b_E16a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46 ER13b ExonRegion 0 0.00 2.03 1.23 1.36 2.68 0.00 0.33 0.00 0.00 0.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.39 1.99 15.43 0.00 2.08 0.00 47 ER13c ExonRegion 0 0.37 5.67 0.35 1.42 2.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.82 8.27 0.00 0.56 0.00 48 E13c_E14a KnownJunction 0 2.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 0.00 0.00 0.00 49 ER14a ExonRegion 0 2.46 11.71 3.00 7.50 9.90 3.02 1.63 0.00 0.00 1.41 0.00 2.93 0.00 0.55 0.00 0.00 0.00 10.21 3.93 34.59 0.00 2.57 0.00 50 E14_Da NovelBoundary 0 0.00 12.10 3.96 10.06 0.00 0.00 0.00 1.68 5.32 3.81 2.16 0.00 0.00 0.00 0.00 0.00 0.00 8.37 7.72 35.09 0.00 0.00 4.10 51 ER15a ExonRegion 0 8.28 27.11 27.45 11.55 9.99 19.28 14.31 9.56 4.61 6.02 6.93 10.59 10.71 3.72 20.03 9.71 2.74 31.95 11.94 71.41 5.48 4.32 18.19 52 E15_Da NovelBoundary 0 607.14 708.82 1613.60 1667.55 582.51 426.69 948.44 1642.76 1641.79 1375.47 330.40 75.62 118.34 130.14 253.66 505.76 696.68 1471.18 328.57 775.83 507.38 168.82 558.96 53 E15a_E17a KnownJunction 0 3.78 20.13 33.82 21.41 10.78 22.77 7.42 4.19 5.67 2.69 2.42 0.00 6.82 0.00 0.00 0.00 0.00 47.96 17.04 118.25 0.00 0.00 0.00 54 E16_Aa NovelBoundary 0 35.86 25.13 68.63 68.79 15.11 14.88 45.53 62.60 47.60 38.49 2.58 10.80 0.00 2.47 33.75 34.01 33.19 71.09 35.39 40.59 9.08 11.94 44.64 55 ER16a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.04 0.00 0.00 0.00 0.00 0.00 56 E16_Da NovelBoundary 0 303.31 192.14 232.69 303.79 174.96 100.23 186.32 237.28 223.29 181.00 54.54 116.44 138.14 143.51 109.15 198.84 180.08 373.25 171.96 214.31 79.14 68.52 144.01 57 E16a_E17a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58 E17_Aa NovelBoundary 0 3.78 33.42 0.00 16.08 4.07 0.00 0.00 10.64 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 4.93 0.00 9.14 0.00 0.00 0.00 59 ER17a ExonRegion 0 4.55 42.61 23.83 22.50 13.43 19.60 7.22 6.46 3.22 5.14 2.21 1.84 6.59 0.00 0.08 0.17 0.00 31.55 25.36 83.62 2.12 1.00 0.00 60 E17a_E18b KnownJunction 0 0.00 9.08 5.32 10.82 7.47 7.61 3.89 1.97 1.53 1.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.83 0.00 36.69 0.00 0.00 0.00 61 E17b_E18a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62 ER17b ExonRegion 0 0.00 6.10 2.45 0.00 0.00 1.83 0.00 1.73 1.24 2.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.13 0.00 0.00 0.00 63 I17_AR1 ActiveIntronRegion 0 0.00 15.42 5.24 5.22 1.88 0.00 7.18 1.12 1.00 1.39 0.16 0.00 0.00 0.00 0.00 0.00 1.79 0.00 5.90 26.46 0.05 0.00 0.00 64 I17_SR1 SilentIntronRegion 0 0.70 16.64 7.89 5.36 3.36 0.82 1.96 1.75 0.73 1.75 0.16 0.64 2.26 0.00 0.00 0.00 0.41 2.05 2.96 14.90 0.13 0.00 0.37 65 I17_AR2 ActiveIntronRegion 0 3.53 24.37 21.43 13.07 6.24 1.67 3.29 5.56 0.99 1.82 0.63 0.31 2.03 0.00 0.44 0.00 0.00 6.96 4.78 14.61 0.00 0.39 0.00 66 I17_AR3 ActiveIntronRegion 0 3.05 48.09 12.09 13.32 7.83 2.66 3.98 0.72 0.00 1.43 0.00 4.85 1.80 0.00 0.00 0.00 0.00 1.21 1.77 13.65 0.00 0.00 0.77 67 I17_AR4 ActiveIntronRegion 0 0.23 17.91 11.85 8.68 4.61 1.20 2.95 3.46 0.20 0.56 0.00 0.78 1.36 0.00 0.00 0.65 0.00 7.32 8.18 26.84 0.00 0.00 0.96 68 I17_SR4 SilentIntronRegion 0 2.27 19.03 19.49 12.01 9.40 2.52 3.58 2.66 0.71 1.42 0.00 3.31 4.66 0.00 0.14 0.00 0.00 4.07 3.31 28.59 0.00 0.14 0.00 69 I17_AR5 ActiveIntronRegion 0 4.71 10.90 26.76 17.62 9.27 1.60 6.14 4.63 1.54 0.98 0.00 1.77 3.93 0.00 0.92 0.00 0.00 2.35 2.02 28.38 0.00 0.00 0.00 70 I17_AR7 ActiveIntronRegion 0 0.71 3.86 5.91 5.67 4.18 2.25 2.66 1.15 0.82 2.29 0.00 2.56 0.00 0.30 0.00 0.00 0.00 10.55 4.27 23.74 0.49 0.23 0.33 71 I17_AR9 ActiveIntronRegion 0 1.97 15.44 6.65 12.91 2.41 6.97 1.81 1.64 2.29 0.90 0.10 0.97 0.42 0.00 0.00 0.00 0.00 5.03 4.21 21.65 0.00 0.23 0.32 72 I17_SR8 SilentIntronRegion 0 0.86 16.44 2.85 9.99 1.24 5.64 1.24 0.00 0.10 1.68 0.00 1.68 0.00 0.00 0.00 0.00 0.00 5.24 1.39 15.25 0.00 0.98 0.00 73 ER18a ExonRegion 0 0.00 4.07 2.45 1.59 0.89 1.83 0.44 0.58 0.21 0.19 0.32 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.53 5.67 0.00 0.00 0.00 74 ER18b ExonRegion 0 2.18 17.99 7.88 12.98 6.59 10.87 2.13 1.11 2.53 2.51 0.62 1.27 0.00 0.00 0.00 0.00 0.00 13.77 8.26 55.20 0.79 0.74 0.00 75 E18a_E19a KnownJunction 0 2.74 28.74 9.93 7.79 11.21 9.54 0.00 0.00 3.59 0.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.08 4.24 60.66 0.00 0.00 0.00 76 E18b_E19a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 77 ER18c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.53 0.00 0.00 0.00 78 ER19a ExonRegion 0 4.36 21.24 12.08 18.10 16.50 24.32 7.41 5.81 3.57 3.86 1.69 3.55 4.04 1.26 6.01 4.19 2.33 12.06 12.91 44.22 2.80 2.23 4.88