Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-390F4.3 Gene 0 10.89 10.10 10.31 6.58 11.90 8.68 9.51 9.98 10.75 11.07 3.05 9.76 9.64 7.47 21.49 11.19 8.54 6.28 14.43 20.07 5.35 3.52 9.52 2 452643 Transcript 0 5.90 5.19 11.57 3.60 11.59 7.42 2.83 6.63 9.48 8.91 0.84 4.84 2.43 3.42 20.51 4.22 2.47 2.93 10.01 12.18 1.61 0.86 2.82 3 443688 Transcript 0 3.00 0.96 9.54 6.49 3.65 1.30 1.56 9.78 1.66 5.44 0.00 0.70 0.00 3.19 9.79 0.98 0.00 1.41 9.04 4.62 0.00 0.00 0.00 4 451142 Transcript 0 4.33 2.80 2.51 2.40 2.43 2.37 2.99 2.72 4.17 2.77 0.64 3.00 3.34 2.44 5.14 3.70 2.33 2.06 2.85 6.91 1.78 1.29 2.49 5 ER1a ExonRegion 0 1.20 0.41 5.67 0.04 5.93 2.18 0.00 3.66 2.43 4.31 0.00 0.00 0.00 0.12 9.75 0.00 0.00 1.77 2.35 4.35 0.00 0.00 0.00 6 E1a_E2a KnownJunction 0 3.41 5.00 9.58 0.00 0.00 13.12 0.00 7.39 7.55 7.04 0.00 0.00 0.00 0.00 15.08 0.00 0.00 1.70 4.71 12.53 0.00 0.00 0.00 7 ER2a ExonRegion 0 14.34 14.59 10.56 5.24 16.30 11.12 13.52 9.80 11.46 11.03 4.21 11.67 12.15 7.59 20.94 13.96 10.73 4.63 21.70 25.41 6.95 4.31 14.10 8 E2_Ab KnownBoundary 0 71.35 112.48 28.09 30.80 69.19 59.85 95.39 21.97 43.89 33.42 17.85 0.00 26.46 11.77 26.82 59.98 48.81 51.90 75.67 88.65 33.24 24.37 55.83 9 ER2b ExonRegion 0 14.38 14.51 16.40 13.02 14.38 12.00 9.23 22.93 26.65 26.72 9.22 17.29 16.59 15.51 54.70 23.46 20.00 23.02 19.73 30.09 7.87 5.62 15.59 10 E2_Da NovelBoundary 0 14.08 0.00 7.57 4.46 0.00 0.00 0.00 2.18 4.75 6.04 0.00 0.00 0.00 2.47 13.35 0.00 4.30 4.73 0.00 0.00 0.00 0.00 0.00 11 E2a_E3b KnownJunction 0 7.56 2.63 1.60 0.00 0.00 2.04 0.00 2.09 13.66 1.67 0.00 0.00 0.00 2.47 0.00 0.00 0.00 2.32 0.00 2.56 0.00 0.00 0.00 12 ER3a ExonRegion 0 2.12 0.51 0.92 0.34 0.00 0.46 0.00 0.43 3.40 0.29 0.00 0.00 0.00 0.81 0.00 1.49 0.00 0.46 0.80 0.53 0.00 0.00 0.00 13 ER3b ExonRegion 0 3.70 3.48 4.80 4.43 5.35 2.01 0.00 5.29 8.82 5.25 0.00 1.77 0.00 2.15 6.71 2.11 2.03 3.65 7.68 5.87 0.00 0.00 0.00 14 E3_Da KnownBoundary 0 0.00 0.00 14.99 9.76 3.90 0.00 0.00 13.60 1.22 7.82 0.00 7.05 0.00 2.35 20.52 4.36 0.00 4.39 12.33 3.00 0.00 0.00 0.00 15 E3a_E4a KnownJunction 0 0.00 5.99 0.00 0.00 0.00 4.66 0.00 1.77 6.94 0.00 0.00 6.30 0.00 0.00 0.00 4.36 0.00 0.00 0.00 5.43 0.00 0.00 0.00 16 ER3c ExonRegion 0 3.00 0.96 9.54 6.49 3.65 1.30 1.56 9.78 1.66 5.44 0.00 0.70 0.00 3.19 9.79 0.98 0.00 1.41 9.04 4.62 0.00 0.00 0.00 17 E3_Db NovelBoundary 0 0.00 0.00 8.34 1.86 0.00 6.36 0.00 9.24 1.10 2.34 0.00 0.00 0.00 0.00 30.41 4.36 3.74 0.00 7.72 8.25 0.00 0.00 0.00 18 E4_Aa NovelBoundary 0 0.00 0.00 18.60 7.56 0.00 10.62 0.00 9.36 4.25 9.64 0.00 0.00 0.00 4.41 26.70 0.00 0.00 0.00 4.42 0.00 0.00 0.00 0.00 19 ER4a ExonRegion 0 4.04 1.85 16.17 5.20 15.42 11.52 1.00 8.18 12.38 13.66 0.00 4.33 0.00 5.40 30.93 3.02 2.49 4.42 10.24 20.22 0.83 0.00 1.11 20 E4a_E5a KnownJunction 0 7.48 3.35 18.15 6.56 29.54 8.23 0.00 6.70 17.39 9.70 0.00 6.30 0.00 5.47 30.78 0.00 0.00 4.60 9.60 8.82 0.00 0.00 0.00 21 E4a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER5a ExonRegion 0 3.05 2.60 13.88 6.16 6.17 2.43 0.65 5.58 8.59 12.47 0.00 6.24 0.00 3.90 25.97 7.12 1.62 1.94 11.70 9.80 1.08 0.00 0.00 23 E5_Da NovelBoundary 0 812.59 515.83 291.53 236.33 583.28 320.55 630.16 328.80 257.93 228.78 165.67 109.39 118.17 57.15 134.50 400.32 302.20 224.35 298.36 436.87 208.25 215.66 358.01 24 E6_Aa NovelBoundary 0 11.04 0.00 7.39 9.22 3.65 5.79 0.00 6.74 19.91 13.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.07 9.60 11.70 0.00 0.00 0.00 25 ER6a ExonRegion 0 5.54 0.89 2.35 1.77 1.03 0.80 0.00 2.25 7.14 2.23 0.00 0.22 0.00 0.00 4.84 2.59 0.00 0.03 5.55 12.02 0.00 0.00 0.00 26 E6_Da NovelBoundary 0 6.89 0.00 14.04 3.30 4.24 0.00 0.00 2.34 8.01 2.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.94 0.00 0.00 0.00 27 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 E7_Aa NovelBoundary 0 1508.71 1190.64 411.96 541.36 1206.11 800.62 1487.27 521.11 494.56 420.04 463.59 479.86 464.26 419.74 573.58 1509.69 837.40 760.88 1239.38 1589.94 639.58 706.76 1424.97 29 ER7a ExonRegion 0 14.01 12.61 9.26 9.87 11.11 10.62 14.93 10.92 10.31 11.32 3.20 14.76 16.71 11.39 20.89 14.44 11.63 9.79 7.90 22.00 8.89 6.47 12.46