Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AL365202.3 Gene 0 23.19 18.73 5.52 10.33 21.26 16.02 34.71 4.91 7.90 5.70 7.98 25.79 38.15 18.45 37.47 26.92 24.63 15.78 31.38 29.07 11.55 7.28 18.67 2 366116 Transcript 0 0.00 0.00 0.18 0.56 0.00 0.00 0.00 0.00 0.00 0.25 0.00 0.48 1.04 0.00 0.00 0.00 0.73 0.00 0.00 0.00 0.00 0.00 0.00 3 366159 Transcript 0 1.19 0.00 0.31 0.34 0.00 0.00 3.39 0.00 0.00 0.29 0.00 1.08 1.17 0.00 1.63 0.00 0.83 0.00 0.00 0.00 0.00 0.00 0.00 4 ER1a ExonRegion 0 0.00 0.00 0.18 0.56 0.00 0.00 0.00 0.00 0.00 0.25 0.00 0.48 1.04 0.00 0.00 0.00 0.73 0.00 0.00 0.00 0.00 0.00 0.00 5 Ix Intron 0 4.37 8.77 3.89 7.68 7.61 1.81 8.47 10.28 6.50 9.06 1.68 15.84 20.38 3.99 3.35 7.16 8.25 3.04 5.11 8.93 0.35 1.19 2.63 6 Ix_AR3 ActiveIntronRegion 0 2.05 15.25 5.12 12.63 1.50 1.29 6.97 13.22 8.21 7.39 0.00 21.90 14.07 2.87 3.16 5.86 2.52 1.47 0.75 4.13 0.00 0.00 0.00 7 Ix_AR2 ActiveIntronRegion 0 4.82 9.86 4.82 7.91 8.72 2.19 7.10 12.06 4.23 10.16 2.37 13.84 24.76 4.05 3.98 5.11 7.54 2.25 6.75 9.05 0.27 0.70 2.56 8 Ix_SR1 SilentIntronRegion 0 3.96 7.94 3.42 7.10 6.95 1.80 8.28 8.51 7.72 9.22 1.15 13.90 15.42 3.75 2.33 9.59 9.60 4.35 3.98 8.83 0.43 1.12 2.88 9 Ix_AR1 ActiveIntronRegion 0 5.29 6.79 3.53 10.11 9.00 1.20 15.23 12.48 9.19 7.07 2.06 33.47 29.83 5.52 5.96 6.12 6.01 1.09 5.51 10.55 0.00 3.89 2.45 10 Ix Intron 0 3.96 3.70 3.42 3.58 4.79 1.41 6.20 6.78 4.69 5.05 1.43 10.71 19.07 1.80 3.20 3.71 5.43 0.77 1.58 4.85 0.20 0.75 0.72 11 Ix_AR4 ActiveIntronRegion 0 10.19 7.24 4.99 5.52 9.83 1.93 8.46 6.22 5.78 4.93 1.39 17.25 16.18 2.99 4.39 6.28 6.83 2.15 0.22 3.92 0.00 0.37 1.27 12 Ix_SR2 SilentIntronRegion 0 7.51 4.70 6.40 5.65 6.90 0.96 6.99 5.40 4.74 3.47 2.61 14.63 12.65 2.16 4.79 7.53 4.13 0.94 2.33 5.07 0.62 1.88 0.99 13 Ix_AR3 ActiveIntronRegion 0 0.00 0.00 4.90 5.11 5.13 3.97 4.08 3.17 2.98 0.00 0.00 15.15 8.60 0.00 2.90 0.00 6.60 0.00 0.00 2.13 0.00 1.56 0.00 14 Ix_AR1 ActiveIntronRegion 0 1.64 0.13 2.27 3.51 2.92 1.50 3.73 1.83 2.45 1.51 2.00 17.47 13.43 2.47 1.91 1.31 8.56 0.93 0.00 2.91 0.00 1.28 0.00 15 Ix_SR1 SilentIntronRegion 0 2.53 3.24 2.66 2.85 4.06 1.38 6.06 7.80 4.84 5.90 1.14 8.57 21.91 1.48 2.77 2.68 5.56 0.57 1.65 5.07 0.12 0.46 0.64 16 ER2a ExonRegion 0 0.26 0.00 0.00 0.00 0.00 0.00 1.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 Ix Intron 0 5.85 9.71 0.92 1.53 12.77 0.92 7.32 2.59 3.24 1.72 0.49 10.24 21.69 0.34 3.30 1.49 1.66 0.69 0.00 3.74 0.00 0.00 0.00 18 Ix_SR1 SilentIntronRegion 0 5.88 9.76 0.92 1.54 12.84 0.93 7.35 2.60 3.25 1.73 0.49 10.29 21.80 0.34 3.32 1.50 1.67 0.70 0.00 3.76 0.00 0.00 0.00 19 E3_Ab NovelBoundary 0 6.52 11.45 4.55 16.22 0.00 0.00 0.00 2.09 12.50 6.77 0.00 6.15 12.99 0.00 0.00 12.48 8.13 6.30 0.00 0.00 0.00 3.06 0.00 20 ER3a ExonRegion 0 2.12 0.00 0.61 0.68 0.00 0.00 5.30 0.00 0.00 0.57 0.00 2.16 2.35 0.00 2.90 0.00 1.65 0.00 0.00 0.00 0.00 0.00 0.00 21 ER3b ExonRegion 0 37.05 30.86 9.67 16.84 35.02 26.88 56.57 7.84 11.64 8.55 13.82 38.82 61.90 28.14 54.33 44.61 40.79 25.15 51.12 45.27 17.27 12.36 31.32 22 E3_Da NovelBoundary 1 176.99 91.17 331.51 447.96 96.94 78.31 146.13 540.99 427.08 373.89 67.49 20.41 24.02 7.06 69.97 101.68 89.20 696.00 159.44 116.58 51.34 66.50 158.35 23 E3a_E4a KnownJunction 0 2120.30 2574.21 8088.36 9917.05 1607.56 1698.85 2634.66 9758.86 8525.90 8314.04 661.11 334.76 340.56 202.07 526.73 1877.97 1453.29 10767.39 1732.38 2620.35 915.85 1129.15 1883.79 24 E4_Aa NovelBoundary 0 3.19 8.55 0.00 7.36 4.33 0.00 11.53 7.68 5.87 4.65 0.00 0.00 31.82 2.30 9.64 12.56 22.44 0.00 7.81 11.44 0.00 0.00 0.00 25 ER4a ExonRegion 0 6.81 3.89 0.05 2.28 4.43 2.46 8.09 1.44 4.10 2.61 0.47 11.72 9.29 7.85 20.91 5.10 4.50 4.78 7.53 10.72 5.53 0.86 2.88