Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KIAA2026 Gene 0 89.27 72.28 31.36 45.27 54.94 30.33 27.68 36.36 37.96 34.18 28.77 67.54 80.90 39.23 20.32 30.05 49.75 36.93 31.31 48.98 27.63 33.97 32.83 2 399933 Transcript 0 177.99 97.10 42.12 53.11 57.90 33.33 35.87 33.67 38.73 35.31 31.61 47.18 60.80 53.15 24.20 35.98 61.88 49.55 37.43 57.62 42.63 28.49 47.36 3 381461 Transcript 0 141.23 11.97 3.51 4.52 14.94 1.45 3.70 4.40 3.46 3.53 10.12 21.12 39.16 22.02 10.70 14.93 34.93 2.72 4.69 5.81 9.32 14.35 4.79 4 ER1a ExonRegion 0 11.60 8.35 11.51 7.64 4.92 6.79 4.36 11.22 13.74 18.26 17.79 2.50 5.01 35.65 15.81 15.40 28.17 35.08 18.71 34.09 30.04 9.20 22.84 5 E1a_E2a KnownJunction 0 84.39 38.87 32.79 22.44 8.57 13.29 15.99 28.05 37.15 50.61 56.91 0.00 26.62 79.52 17.80 44.09 67.13 88.21 47.53 75.04 61.90 26.51 84.08 6 ER2a ExonRegion 0 98.70 77.43 56.66 76.41 70.71 42.86 48.97 44.01 62.42 41.73 42.90 27.31 58.15 73.14 31.41 51.89 81.06 81.07 52.87 74.44 62.07 32.92 63.51 7 E2a_E3a KnownJunction 0 129.36 157.60 67.00 73.52 76.49 81.54 64.08 27.56 51.59 34.22 30.90 55.67 47.24 83.70 35.60 58.79 112.67 67.53 39.53 61.55 77.59 44.64 71.88 8 ER3a ExonRegion 0 287.71 232.19 94.31 155.16 151.72 65.10 77.23 90.46 82.65 74.96 55.06 145.89 182.77 76.17 48.28 63.80 95.13 60.39 79.08 100.13 44.48 61.98 65.90 9 E3_Ab KnownBoundary 0 532.39 365.72 173.94 221.02 267.49 122.94 129.53 157.97 104.51 102.48 64.28 168.81 182.46 100.01 41.91 39.22 106.78 15.75 77.56 135.31 30.46 56.52 30.47 10 ER3b ExonRegion 1 488.44 210.45 129.93 163.33 266.40 90.16 107.40 100.75 71.48 74.36 39.14 180.22 221.37 58.03 39.93 40.46 72.39 23.16 40.79 75.59 19.37 46.45 35.10 11 E3_Da NovelBoundary 0 29.63 25.46 6.36 14.32 11.97 2.84 2.25 15.03 8.65 8.00 0.00 6.00 34.09 0.00 11.37 0.00 13.28 3.61 0.00 11.25 2.35 2.33 7.85 12 E3a_E4a KnownJunction 0 94.39 146.88 60.38 75.51 165.87 59.34 54.06 49.82 32.00 27.43 47.64 215.92 155.02 40.67 39.80 46.83 53.95 8.54 21.65 48.64 12.36 41.94 19.97 13 E3a_E5a NovelJunction 0 3.78 0.00 1.74 3.80 0.00 0.00 0.00 2.55 2.55 0.00 2.68 5.70 20.45 2.30 0.00 4.36 0.00 2.07 0.00 6.33 2.59 0.00 0.00 14 I3_SR1 SilentIntronRegion 0 25.60 16.64 9.29 12.46 43.41 6.12 14.69 8.50 3.27 5.10 0.51 5.07 25.50 1.14 3.10 1.58 3.51 1.09 4.15 5.24 1.12 0.55 3.12 15 I3_AR1 ActiveIntronRegion 1 7.14 15.25 13.17 17.38 13.38 4.13 5.13 5.83 4.94 3.01 0.00 8.66 23.45 0.00 11.61 0.00 0.00 1.85 1.99 4.26 4.41 0.00 0.00 16 ER4a ExonRegion 0 107.47 126.51 75.93 67.72 134.09 34.77 49.35 66.37 47.15 35.87 53.59 198.88 196.57 56.30 43.52 46.77 94.86 22.40 25.01 77.39 21.68 66.85 42.43 17 E4_Da NovelBoundary 1 10.00 5.66 17.00 5.76 11.88 2.56 4.50 22.71 10.24 7.82 19.48 86.13 6.01 2.47 6.30 0.00 9.54 1.62 4.52 5.56 0.00 2.51 0.00 18 E4a_E5a KnownJunction 0 178.55 89.06 80.36 31.16 171.99 21.46 38.60 30.60 26.68 37.88 40.06 162.05 198.85 61.75 47.84 39.73 118.09 31.79 27.29 81.43 25.14 73.54 51.82 19 E4a_E6a NovelJunction 0 14.22 2.63 0.00 0.00 0.00 0.00 0.00 0.00 1.79 2.58 0.00 6.30 0.00 0.00 0.00 0.00 4.39 0.00 0.00 2.94 0.00 0.00 0.00 20 E4a_E7a NovelJunction 0 29.63 43.41 17.59 23.64 60.95 41.11 20.67 14.99 30.12 39.70 4.74 25.21 13.31 16.60 4.45 4.36 8.23 8.42 0.00 20.39 19.83 25.17 4.35 21 I4_AR1 ActiveIntronRegion 0 10.73 3.79 12.13 3.76 4.89 0.79 3.72 12.75 1.70 4.69 5.77 30.16 11.16 0.00 8.90 0.00 4.44 0.00 2.64 3.67 3.88 1.58 2.48 22 I4_AR2 ActiveIntronRegion 1 15.87 20.34 24.38 6.81 5.89 1.83 6.36 24.20 4.82 6.88 9.86 8.66 21.57 0.00 20.31 0.00 4.29 0.00 12.74 12.77 0.00 6.25 9.40 23 I4_SR1 SilentIntronRegion 0 12.70 8.35 9.94 4.71 5.50 1.01 4.38 16.32 2.62 4.76 6.83 12.18 6.55 2.42 7.21 0.51 2.68 0.75 2.65 4.67 0.37 4.09 2.63 24 I4_AR3 ActiveIntronRegion 0 3.19 3.05 8.54 9.24 4.69 2.54 3.53 12.23 3.46 2.77 4.02 18.76 16.39 2.01 5.61 3.07 3.97 1.15 2.33 3.03 1.52 3.51 0.51 25 I4_SR2 SilentIntronRegion 1 0.00 2.03 0.00 6.59 0.45 0.00 5.30 0.00 0.00 1.15 1.93 0.00 27.36 4.87 5.80 0.00 3.30 0.00 0.00 4.26 0.00 0.00 0.00 26 I4_AR4 ActiveIntronRegion 0 2.03 3.01 0.00 4.51 5.28 1.19 6.96 0.73 1.06 3.50 0.11 9.57 16.66 3.72 2.08 1.87 1.24 0.00 1.80 2.29 0.00 0.00 2.51 27 ER5a ExonRegion 1 273.48 93.93 48.25 46.04 94.69 25.12 40.22 28.33 23.17 29.73 28.16 170.29 167.80 59.46 33.04 34.28 86.92 17.39 25.09 47.66 16.82 58.94 38.34 28 E5a_E6a KnownJunction 0 291.46 15.52 4.61 3.63 26.40 0.00 4.11 9.28 5.50 2.77 16.48 24.76 60.39 29.43 14.59 22.39 52.83 2.28 4.80 3.26 8.96 30.00 8.28 29 E5a_E7a KnownJunction 0 627.96 152.80 32.55 31.63 92.87 22.83 39.22 30.31 22.48 24.74 16.64 93.93 105.84 19.60 14.46 15.55 48.99 14.30 17.22 56.69 22.36 22.23 23.30 30 I5 Intron 0 6.48 5.05 2.12 4.36 5.05 1.27 4.71 2.89 2.52 1.67 1.80 9.89 16.39 2.64 3.21 3.76 5.62 1.90 2.11 4.73 1.49 2.88 2.45 31 I5_SR1 SilentIntronRegion 0 3.46 2.18 0.64 2.25 3.49 0.79 4.45 1.18 1.86 0.80 1.45 11.37 16.76 2.35 2.59 2.82 4.43 0.95 1.44 3.85 1.11 2.20 1.67 32 I5_AR1 ActiveIntronRegion 0 0.00 1.85 0.00 1.12 0.00 1.08 0.00 4.24 0.17 0.00 0.00 3.54 23.24 4.06 0.00 2.97 0.00 1.01 0.00 0.00 0.00 1.42 2.54 33 I5_AR2 ActiveIntronRegion 1 11.60 4.99 2.49 2.43 4.16 1.40 5.15 6.21 1.14 2.36 0.33 12.80 28.87 2.82 2.23 5.50 10.81 4.08 2.74 4.59 2.65 2.28 6.11 34 I5_AR3 ActiveIntronRegion 0 15.06 5.60 4.58 6.59 7.35 3.47 7.90 4.55 3.75 1.47 1.36 15.49 17.90 2.93 5.97 3.98 8.13 2.03 2.00 5.31 2.21 3.47 3.68 35 I5_SR3 SilentIntronRegion 0 10.50 13.13 3.75 7.84 6.63 1.85 6.04 4.89 5.19 3.56 4.36 14.71 18.12 4.06 5.01 5.95 8.32 4.90 3.75 7.78 3.62 5.64 3.48 36 I5_AR4 ActiveIntronRegion 0 15.91 14.64 5.26 12.88 13.09 1.06 6.10 5.77 5.34 7.55 2.23 9.63 26.70 3.37 5.22 5.41 5.36 1.92 2.26 7.65 1.38 3.42 1.36 37 I5_SR4 SilentIntronRegion 0 8.19 9.06 6.18 9.03 6.63 1.20 4.67 3.58 3.82 1.87 1.48 7.93 22.77 3.98 3.06 4.72 2.50 3.72 3.69 4.55 0.38 6.60 2.57 38 E6_Aa NovelBoundary 0 19.93 8.81 4.49 11.39 15.96 0.00 19.92 10.35 9.52 7.41 2.68 20.41 13.31 11.54 5.93 8.63 4.77 7.34 8.19 2.75 7.66 14.08 7.51 39 ER6a ExonRegion 0 98.51 17.03 4.38 8.33 18.42 4.35 5.32 3.92 4.88 4.32 13.87 31.69 50.27 31.17 11.83 22.39 43.44 3.96 9.26 10.90 15.85 13.06 6.08 40 E6_Da NovelBoundary 0 39.27 17.43 5.50 9.99 0.00 6.64 6.76 2.55 2.63 3.65 9.00 6.15 13.64 33.67 4.57 15.64 29.08 1.62 0.00 8.63 11.31 13.04 0.00 41 E6a_E7a KnownJunction 0 33.71 3.35 1.54 1.60 0.00 0.00 1.68 0.00 0.00 3.52 0.00 6.90 6.82 5.47 5.69 0.00 8.51 1.91 0.00 3.26 3.15 0.00 0.00 42 I6 Intron 0 3.73 5.39 1.45 3.03 4.39 2.57 4.36 2.88 3.54 2.87 3.54 14.08 31.46 6.00 2.21 5.40 6.57 2.64 2.44 5.47 3.83 6.39 3.36 43 I6_SR1 SilentIntronRegion 0 5.25 6.00 1.90 3.88 4.24 3.23 6.13 3.38 4.69 3.26 4.08 17.74 39.02 8.00 2.84 6.30 9.12 2.47 3.14 6.22 3.63 7.98 3.72 44 I6_AR1 ActiveIntronRegion 0 2.85 5.11 1.00 2.85 6.13 3.44 2.91 3.16 2.56 3.07 5.91 13.21 38.20 6.38 2.01 9.24 6.10 5.63 2.40 6.97 8.61 5.78 5.89 45 E7_Aa NovelBoundary 0 0.00 0.00 0.00 10.85 0.00 2.67 12.54 0.00 7.32 1.67 0.00 0.00 34.74 5.24 0.00 4.36 8.79 0.00 4.14 9.01 3.15 8.82 0.00 46 ER7a ExonRegion 0 167.22 130.06 35.77 48.90 99.86 53.48 39.65 38.37 46.98 40.06 45.01 122.20 143.37 52.92 23.11 31.80 82.01 44.19 28.50 70.01 29.12 69.38 52.07 47 E7_Da NovelBoundary 0 3.78 18.75 4.52 6.99 8.66 2.33 0.00 4.19 7.12 4.43 0.00 7.65 6.82 0.00 4.45 0.00 4.49 1.66 13.08 0.00 3.15 0.00 0.00 48 E7a_E8a KnownJunction 0 132.32 180.30 36.96 46.31 94.31 49.63 52.73 39.02 60.53 42.28 53.33 122.29 89.60 55.51 38.94 57.42 86.40 33.00 45.74 54.84 29.16 53.95 61.29 49 ER8a ExonRegion 0 53.66 109.33 28.74 48.43 79.30 51.13 33.82 60.69 61.92 67.26 64.44 138.70 145.22 68.46 36.73 39.40 81.42 44.44 37.04 79.33 27.50 81.14 53.64 50 E8a_E9a KnownJunction 0 59.20 54.79 22.56 67.16 61.71 63.09 40.72 51.30 71.47 81.69 76.49 126.94 112.49 72.34 37.46 43.83 67.13 51.94 35.30 93.70 22.98 95.77 79.81 51 ER9a ExonRegion 0 17.69 30.12 10.10 14.53 19.53 20.14 11.89 21.64 27.43 22.85 20.81 45.25 52.35 25.46 10.86 21.88 35.57 31.59 20.65 34.49 22.66 27.21 23.91 52 ER9b ExonRegion 0 6.20 12.49 0.00 4.96 0.00 0.92 1.23 4.07 1.06 2.62 1.10 4.95 0.00 4.29 6.01 2.34 0.00 0.26 7.05 1.37 0.00 1.93 0.00