Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 WASH1 Gene 0 22.46 12.85 76.38 45.88 21.91 19.08 23.37 69.95 44.91 119.27 43.68 14.20 10.52 48.17 47.26 48.58 47.36 111.31 42.09 36.85 25.66 17.66 22.81 2 442898 Transcript 0 1.04 0.08 2.34 0.00 0.52 1.45 1.43 1.24 0.99 2.55 2.01 0.00 0.00 0.66 0.86 0.13 1.99 0.53 3.32 0.00 1.87 0.01 0.00 3 330546 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.23 0.00 0.22 0.15 0.14 0.00 0.00 0.00 0.00 0.00 0.37 0.00 0.00 0.00 0.00 0.00 0.26 0.00 4 399972 Transcript 0 19.94 11.46 73.50 42.47 18.99 18.30 21.65 65.43 42.40 101.73 33.67 14.49 10.49 46.41 35.80 38.01 28.14 100.31 35.50 30.86 25.71 18.01 24.17 5 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.44 0.00 0.04 0.14 0.10 0.00 0.00 0.00 0.00 0.00 0.09 0.00 0.00 0.00 0.00 0.00 0.05 0.00 6 E1a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.46 0.00 0.43 0.31 0.29 0.00 0.00 0.00 0.00 0.00 0.74 0.00 0.00 0.00 0.00 0.00 0.52 0.00 8 ER2b ExonRegion 0 8.42 0.68 4.56 1.35 0.21 3.45 0.85 4.89 1.53 7.33 0.81 0.00 0.00 0.00 0.44 0.89 0.11 3.39 2.37 0.71 1.81 0.64 0.00 9 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 E2a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 I2_SR1 SilentIntronRegion 0 7.02 6.86 15.53 9.56 16.43 11.26 19.39 25.62 28.85 40.56 29.82 54.14 26.63 51.59 26.04 23.19 18.26 29.16 18.14 25.54 21.75 10.98 8.05 12 I2_AR2 ActiveIntronRegion 0 2.12 0.00 19.61 10.09 13.38 6.60 6.09 26.96 45.45 64.91 9.86 6.49 0.00 0.97 0.00 2.97 6.60 31.97 0.00 6.17 17.19 0.00 0.00 13 I2_AR3 ActiveIntronRegion 1 2.37 3.88 29.70 17.28 27.12 9.92 22.61 20.68 50.05 73.09 62.87 20.14 16.22 32.08 14.07 25.84 24.81 82.85 44.54 36.65 18.02 17.21 14.00 14 I2_SR3 SilentIntronRegion 0 0.00 2.79 4.86 3.37 7.76 10.16 17.47 9.76 2.10 8.91 0.00 3.52 1.49 2.75 4.21 9.37 0.04 48.63 11.13 6.43 0.00 3.78 2.23 15 I2_AR6 ActiveIntronRegion 0 3.89 4.16 20.83 11.05 5.77 3.94 8.05 26.17 19.32 39.24 11.05 2.70 2.61 11.19 11.74 17.96 16.58 48.93 14.76 17.37 14.81 9.01 8.00 16 ER3a ExonRegion 0 35.61 25.63 148.96 84.21 46.27 37.28 52.79 150.91 98.75 237.55 82.35 40.47 29.12 111.43 86.71 93.23 74.79 227.91 96.91 78.70 54.37 43.92 47.45 17 E3a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER4a ExonRegion 0 4.54 0.58 12.52 0.00 2.87 7.34 6.62 8.64 3.79 15.16 12.98 0.00 0.00 0.00 2.69 0.00 6.60 1.85 6.83 0.00 13.06 0.00 0.00 19 ER4b ExonRegion 0 16.18 7.97 7.84 0.00 2.24 4.14 7.23 5.79 3.26 10.51 5.01 1.86 0.00 0.00 0.00 0.00 2.32 0.17 1.95 0.00 4.72 0.00 0.00 20 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER5a ExonRegion 0 36.21 22.54 51.42 41.72 13.54 21.31 37.22 27.44 17.66 43.48 15.84 0.00 1.34 9.25 15.63 18.88 12.96 53.62 14.52 12.87 15.74 14.19 4.91 22 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER6a ExonRegion 0 8.76 3.61 110.11 69.55 19.39 33.88 13.78 82.01 60.30 163.44 46.57 5.06 3.18 28.51 21.43 39.03 28.29 112.54 17.51 30.52 55.78 14.51 11.49 24 E6_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E6a_E6b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER6b ExonRegion 0 24.21 8.76 71.55 43.21 10.70 17.62 12.16 45.37 28.45 67.64 18.67 2.99 2.35 27.80 20.70 20.79 9.61 73.00 9.60 13.88 22.75 10.11 25.06 27 E6_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER6c ExonRegion 1 3.94 0.77 110.72 94.99 2.00 11.03 3.88 82.50 49.47 162.38 71.52 6.29 7.82 43.29 46.31 61.20 83.94 176.06 48.04 41.17 30.04 29.79 27.23 29 E6b_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 ER7a ExonRegion 0 42.12 17.81 81.46 53.68 38.60 27.04 18.96 91.90 45.25 182.49 101.60 14.63 11.58 64.05 66.42 92.35 110.16 188.90 70.48 42.59 27.74 17.18 29.08 31 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 E7b_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER7b ExonRegion 0 2.12 0.00 1.23 0.00 0.00 1.83 0.00 0.00 0.00 2.29 0.00 0.00 0.00 1.62 0.00 0.00 1.65 1.85 12.74 0.00 0.00 0.00 0.00 34 ER8a ExonRegion 0 2.36 0.24 2.64 1.83 3.70 0.76 2.80 2.96 2.71 13.33 4.18 1.14 1.77 15.72 13.70 6.51 12.14 1.41 6.71 5.71 0.00 1.34 2.42 35 E8a_E9a KnownJunction 0 14.60 3.29 7.01 0.00 12.65 2.84 9.85 10.72 8.33 14.02 10.00 0.00 6.82 12.89 15.58 8.72 9.35 15.34 18.35 6.14 0.00 0.00 0.00 36 ER9a ExonRegion 0 17.98 3.54 12.21 2.03 2.94 8.17 9.02 10.62 10.36 31.44 10.41 0.00 0.74 15.11 30.43 22.11 18.27 25.07 11.99 8.19 0.00 0.00 7.64 37 E9_Da NovelBoundary 0 14.52 0.00 6.50 0.00 8.15 0.00 3.97 4.85 13.14 6.04 4.74 0.00 0.00 5.36 0.00 8.72 3.74 28.35 4.61 2.94 0.00 0.00 0.00 38 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 ER10a ExonRegion 0 4.23 20.69 9.25 1.17 3.37 1.70 9.67 15.76 8.02 28.21 12.41 0.00 0.00 7.27 10.43 4.95 22.05 15.16 13.99 2.41 0.00 0.00 0.43 40 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 ER11a ExonRegion 1 21.47 9.95 61.07 34.81 23.01 8.50 16.18 49.84 33.22 95.83 31.32 6.92 4.41 33.04 73.55 51.34 70.18 73.99 27.77 42.96 10.53 3.00 20.79 42 E11_Da KnownBoundary 1 139.95 76.17 84.50 52.74 81.58 90.35 27.07 38.12 24.74 30.54 17.11 34.81 11.69 10.01 58.10 0.00 30.20 31.75 0.00 18.79 3.15 2.27 22.54 43 ER11b ExonRegion 1 2.12 1.15 20.26 10.77 4.82 4.10 14.65 7.78 7.53 10.21 10.95 1.15 4.69 6.50 9.57 5.94 31.36 10.10 12.74 3.40 2.13 0.00 0.00 44 ER11c ExonRegion 0 0.60 0.00 2.63 0.00 0.76 0.52 3.40 0.00 3.00 0.33 1.10 0.00 0.00 3.02 3.32 0.85 5.66 0.00 3.64 0.00 0.00 0.00 0.00