Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	MLLT3	Gene	0	26.50	36.84	15.80	8.66	21.86	33.22	11.25	43.57	12.52	20.31	56.13	37.31	75.38	66.79	43.97	47.49	70.35	11.96	20.26	16.02	17.28	32.03	25.13
2	380338	Transcript	0	23.71	25.70	14.92	15.05	21.20	38.10	6.13	39.90	15.47	24.83	131.90	65.45	145.91	163.43	74.82	94.60	175.62	24.15	30.89	31.81	40.08	53.60	40.25
3	475957	Transcript	0	8.08	2.81	1.09	2.00	3.02	0.30	1.53	5.09	1.49	1.22	0.51	1.11	0.85	0.45	2.51	2.75	1.04	0.54	1.26	0.50	1.02	0.90	0.87
4	468513	Transcript	0	0.00	0.18	0.00	0.00	0.23	0.00	0.65	0.58	0.00	0.15	0.17	2.23	1.24	0.26	0.00	0.36	1.91	0.40	0.55	0.18	0.00	0.42	0.00
5	380323	Transcript	0	2.61	0.00	0.00	0.00	0.00	0.00	2.49	0.00	0.87	0.00	0.68	0.00	0.00	1.43	0.00	0.00	0.39	0.33	0.75	0.00	0.91	0.00	0.00
6	488705	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	380321	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	491137	Transcript	0	0.27	0.00	0.00	0.00	0.00	0.00	0.37	0.36	0.00	0.24	0.27	0.92	0.00	0.00	0.29	2.94	1.40	0.26	0.00	0.57	0.00	0.00	0.83
9	355930	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
10	429426	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
11	469261	Transcript	0	0.00	6.45	0.00	2.06	0.00	0.00	0.00	1.97	0.00	0.00	2.47	11.40	0.00	0.00	0.00	0.00	0.00	0.00	16.75	0.00	3.15	6.25	0.00
12	ER1a	ExonRegion	1	10.11	8.47	0.80	0.00	3.06	41.60	5.44	2.26	0.88	4.55	24.29	0.00	3.47	22.38	21.56	26.49	34.72	7.11	7.50	4.66	11.44	6.23	10.56
13	E1_Ab	KnownBoundary	1	30.89	29.14	3.13	3.53	15.53	87.11	7.91	2.55	3.59	16.06	62.75	0.00	12.99	47.38	28.68	34.26	81.44	20.06	29.08	14.32	32.93	22.84	19.97
14	ER1b	ExonRegion	1	15.43	15.30	7.07	2.33	4.08	19.25	4.77	13.22	1.73	6.99	50.67	8.66	14.31	81.58	66.49	81.44	86.18	19.73	23.18	12.80	31.72	23.13	34.76
15	E1a_E2a	KnownJunction	1	3.70	32.43	17.21	18.31	3.48	23.00	1.85	28.63	6.48	11.71	58.86	6.30	6.49	175.23	127.20	187.64	60.40	33.20	21.55	17.45	15.94	62.27	74.86
16	ER2a	ExonRegion	1	8.23	28.16	19.77	12.59	18.57	67.94	10.56	34.06	20.62	22.90	90.75	14.76	57.99	134.98	93.53	123.20	128.94	33.42	34.46	34.69	43.43	52.19	62.08
17	E2a_E3a	KnownJunction	0	31.12	45.98	19.34	18.11	7.64	51.11	3.93	44.57	32.06	32.64	151.04	84.03	200.96	147.74	96.55	150.73	177.19	27.03	42.82	44.81	35.83	78.62	47.21
18	E2a_E5a	KnownJunction	0	0.00	0.00	0.00	1.83	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	I2_AR3	ActiveIntronRegion	0	2.07	3.94	0.75	1.62	1.96	0.91	5.01	10.16	1.94	1.29	1.13	12.32	25.51	0.59	1.20	5.75	17.46	0.00	3.26	3.98	0.64	0.00	3.64
20	I2_SR5	SilentIntronRegion	0	5.72	4.17	1.76	1.18	4.45	0.36	4.69	15.29	2.48	5.01	0.62	5.87	13.98	1.25	6.72	8.85	9.13	0.59	1.84	3.63	0.72	0.15	3.32
21	I2_SR6	SilentIntronRegion	0	3.23	1.60	1.06	0.79	1.31	0.50	3.72	4.52	1.01	1.41	0.62	5.45	15.51	1.63	2.86	7.39	8.69	0.45	1.41	2.99	0.63	0.15	1.91
22	I2_SR1	SilentIntronRegion	0	12.34	4.39	2.73	1.72	5.93	2.13	3.98	10.73	2.04	2.98	0.71	6.22	12.99	2.22	4.91	5.41	6.57	0.89	2.82	2.62	1.01	0.29	2.32
23	I2_AR1	ActiveIntronRegion	0	70.89	21.67	9.26	7.40	21.13	2.33	10.73	34.18	4.36	8.50	1.81	5.62	26.15	1.68	8.81	11.42	11.32	1.19	2.23	4.01	1.75	0.75	3.12
24	I2_SR2	SilentIntronRegion	0	12.02	0.94	1.93	2.82	6.59	0.00	6.34	8.52	0.00	0.33	0.00	4.02	5.19	4.70	6.11	8.49	0.00	0.00	4.21	0.00	0.00	0.00	0.00
25	I2_AR2	ActiveIntronRegion	0	20.77	9.45	4.15	2.43	10.53	0.21	6.87	14.51	2.58	4.58	1.58	7.01	12.45	3.31	6.31	7.45	3.86	0.32	1.22	2.24	0.26	0.00	2.75
26	I2_SR3	SilentIntronRegion	0	6.33	6.65	1.29	2.24	4.11	0.54	4.61	12.38	2.39	2.93	1.07	5.54	15.24	2.58	4.97	9.07	7.15	0.93	1.51	3.60	0.69	0.53	3.35
27	I2_AR4	ActiveIntronRegion	1	6.31	8.63	1.82	2.94	7.51	0.66	4.14	5.69	0.91	3.46	0.00	10.68	18.71	0.58	7.24	4.82	3.97	0.00	0.00	4.23	0.00	0.00	0.00
28	I2_SR4	SilentIntronRegion	0	9.67	10.19	2.90	3.53	7.03	1.97	7.56	13.54	3.61	3.65	1.56	6.41	16.19	1.61	6.31	8.69	5.18	1.58	1.10	3.00	0.79	0.00	3.47
29	I2_AR5	ActiveIntronRegion	1	4.23	0.00	2.45	0.00	2.68	1.83	2.65	0.00	0.00	2.29	0.00	4.33	10.72	1.62	12.85	11.46	0.00	1.85	0.00	2.13	2.20	0.00	2.94
30	I2_AR6	ActiveIntronRegion	0	12.71	7.15	3.45	1.92	7.49	1.00	5.73	16.71	3.07	3.47	0.84	5.47	7.43	3.39	6.93	19.33	10.09	2.51	2.78	2.96	1.92	0.29	4.33
31	I2_AR7	ActiveIntronRegion	0	9.59	2.80	0.53	2.09	4.29	1.60	5.27	8.44	2.29	2.18	1.02	11.41	20.62	2.80	2.89	9.10	5.53	0.90	1.85	1.50	1.28	0.30	5.29
32	I2_AR8	ActiveIntronRegion	0	4.46	1.22	0.00	0.87	5.32	0.00	7.76	6.59	1.87	3.14	1.07	7.03	18.82	0.76	5.90	7.94	12.00	0.00	0.00	0.38	0.00	0.00	7.77
33	ER3a	ExonRegion	0	26.55	28.40	19.46	19.75	18.96	22.12	6.13	61.31	28.91	30.87	210.15	90.19	209.02	226.71	86.20	127.16	252.50	36.31	41.64	42.60	55.92	92.88	52.29
34	E3a_E4a	KnownJunction	0	22.74	30.26	25.25	22.94	68.51	23.57	3.53	72.66	20.05	36.96	215.58	75.32	134.73	232.03	113.23	113.30	295.84	38.39	54.87	50.88	60.48	67.72	44.56
35	ER4a	ExonRegion	0	38.77	32.64	16.28	17.93	24.12	46.06	8.49	50.98	16.56	37.05	164.55	94.32	255.64	239.26	92.44	121.51	241.26	36.44	36.65	36.63	56.93	60.89	54.33
36	E4a_E5a	KnownJunction	0	28.15	19.73	14.46	22.57	15.79	69.45	10.25	21.48	2.95	22.32	152.56	105.93	206.32	265.70	106.93	117.06	219.45	22.05	28.99	39.25	58.63	62.03	69.31
37	ER5a	ExonRegion	0	44.10	101.83	34.08	17.82	46.04	69.63	23.72	85.98	23.90	49.66	199.38	160.41	387.41	200.98	116.89	163.08	256.50	31.31	56.92	44.86	47.33	101.53	82.21
38	E5a_E10a	KnownJunction	0	94.98	187.80	40.92	26.90	110.95	128.90	43.46	97.84	30.35	84.88	361.67	191.01	635.67	329.16	204.22	292.15	374.57	64.13	172.62	52.09	81.36	128.90	150.07
39	ER6a	ExonRegion	0	0.00	0.71	0.00	0.00	0.93	0.00	1.38	0.00	0.00	0.59	0.67	8.92	1.28	1.03	0.00	0.00	4.58	1.60	2.21	0.74	0.00	0.72	0.00
40	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	1.23	2.31	0.00	0.00	0.00	0.00	3.67	0.00	0.00	1.46	3.06	0.00	0.00	0.00	0.00	0.97	0.00
42	E7a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	ER8a	ExonRegion	0	2.61	0.00	0.00	0.00	0.00	0.00	2.49	0.00	0.87	0.00	0.68	0.00	0.00	1.43	0.00	0.00	0.39	0.33	0.75	0.00	0.91	0.00	0.00
44	E8_Ad	KnownBoundary	0	14.08	0.00	0.00	0.00	0.00	0.00	0.00	4.48	2.95	0.00	2.68	6.30	0.00	0.00	0.00	0.00	9.07	2.16	4.61	0.00	3.15	0.00	0.00
45	ER8b	ExonRegion	0	6.35	0.00	0.00	0.00	0.00	0.00	2.65	0.00	1.24	0.00	1.93	0.00	0.00	1.62	0.00	0.00	3.30	1.85	3.19	0.00	2.20	0.00	0.00
46	ER8c	ExonRegion	0	8.96	0.00	0.00	0.00	0.00	0.00	2.65	1.73	2.03	0.00	1.93	0.00	0.00	1.62	0.00	0.00	6.41	1.85	4.31	0.00	2.20	0.00	0.00
47	ER8d	ExonRegion	0	25.99	0.06	0.00	0.00	0.00	0.00	0.60	1.44	1.98	0.03	0.74	0.49	8.32	2.01	1.51	1.00	3.02	1.43	3.28	0.12	0.78	0.00	0.00
48	E8_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	4.33	0.00	0.00	3.98	0.00	0.00	0.00	13.50	0.00	0.00	0.00	4.02	8.88	0.00	0.00	0.00	0.00	0.00	11.78
49	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00
50	E8a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
51	E8a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
52	ER9a	ExonRegion	0	0.80	0.00	0.00	0.00	0.00	0.00	1.12	1.09	0.00	0.72	0.81	2.76	0.00	0.00	0.86	4.47	4.20	0.79	0.00	1.72	0.00	0.00	2.48
53	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
54	E10_Aa	NovelBoundary	0	17.11	0.00	0.00	1.60	0.00	2.90	1.99	4.93	0.00	1.45	0.00	0.00	6.17	2.41	4.45	7.86	0.00	1.91	0.00	0.00	5.93	0.00	8.37
55	ER10a	ExonRegion	0	91.76	122.36	45.69	20.86	72.21	68.24	23.64	86.24	33.19	66.16	229.43	123.56	373.47	273.07	180.49	243.87	279.14	75.08	92.59	65.96	86.29	98.80	143.35
56	E10a_E11a	KnownJunction	0	43.34	59.92	46.48	24.67	38.54	43.67	31.89	68.63	38.60	74.73	145.98	162.80	203.88	308.79	210.89	223.79	231.14	65.99	94.59	56.89	91.12	98.83	146.82
57	E11_Ab	NovelBoundary	0	36.30	28.81	9.61	6.63	14.94	20.33	3.71	13.31	10.42	21.19	77.07	67.22	101.45	192.83	101.74	173.12	144.74	15.09	84.80	28.19	65.98	59.21	73.07
58	ER11a	ExonRegion	0	39.86	47.22	42.75	19.61	27.80	45.74	22.29	74.52	29.57	68.81	160.22	142.63	204.02	341.43	207.60	237.60	241.33	64.26	113.26	51.65	99.29	94.80	127.74
59	E11_Ac	KnownBoundary	1	79.27	44.20	42.49	14.22	37.95	86.09	23.10	87.16	16.55	49.35	223.95	62.87	294.79	243.75	120.03	116.55	237.31	43.86	64.19	44.55	40.83	51.01	76.49
60	ER11b	ExonRegion	0	61.94	51.27	43.60	18.79	37.60	73.26	21.95	81.15	29.06	64.89	233.27	116.44	274.49	347.48	180.34	219.94	295.17	55.82	121.88	58.12	93.83	86.52	126.12
61	ER11c	ExonRegion	0	49.02	58.54	33.45	15.20	51.53	96.50	29.73	72.04	24.99	51.15	204.49	102.05	201.12	224.16	128.97	142.53	226.56	50.51	69.98	54.52	83.74	63.56	78.09
62	E11_Da	KnownBoundary	0	3.78	11.58	5.91	3.00	8.23	0.00	6.23	2.09	1.79	6.37	0.00	0.00	0.00	0.00	8.90	0.00	4.77	1.70	0.00	2.36	5.62	0.00	0.00
63	E11a_E12a	KnownJunction	0	64.31	86.23	40.74	14.62	87.18	106.08	12.06	53.27	36.11	41.58	157.20	88.98	186.51	168.82	134.37	135.35	205.42	63.71	65.51	47.11	60.73	56.21	60.10
64	ER11d	ExonRegion	0	16.16	5.61	2.17	2.17	6.05	0.61	3.06	10.18	2.98	2.45	1.02	2.23	1.70	0.89	5.03	5.50	2.08	1.07	2.53	1.00	2.03	1.79	1.75
65	E11_Db	NovelBoundary	0	30.67	12.37	0.00	0.00	0.00	5.34	0.00	8.01	1.79	0.00	0.00	7.05	6.17	0.00	4.45	4.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00
66	I11	Intron	0	11.19	3.90	1.98	2.32	4.05	0.79	2.17	8.05	1.88	2.33	1.32	2.21	6.91	2.13	4.07	6.25	4.29	1.00	2.26	0.66	2.04	2.19	2.09
67	I11_SR1	SilentIntronRegion	0	11.22	3.91	1.98	2.33	4.06	0.80	2.18	8.07	1.88	2.33	1.32	2.22	6.93	2.14	4.08	6.27	4.30	1.00	2.27	0.66	2.05	2.20	2.09
68	ER12a	ExonRegion	0	64.52	85.82	65.29	33.89	66.83	114.33	23.88	96.52	25.42	51.35	202.30	82.60	148.45	243.22	196.76	195.99	259.73	58.82	79.38	66.65	63.46	86.41	98.30
69	E12_Da	NovelBoundary	0	29.34	40.26	29.15	20.68	27.67	36.51	13.47	51.51	11.28	27.02	55.86	29.56	43.99	139.91	121.27	85.45	112.11	8.62	30.12	27.74	32.62	59.52	24.16
70	E12b_E13a	KnownJunction	0	62.01	62.36	34.74	23.57	87.78	62.35	38.16	75.82	13.60	31.89	172.99	106.68	60.71	190.65	183.08	139.19	197.01	31.38	71.81	40.08	60.54	106.42	67.86
71	E12b_E15a	KnownJunction	0	0.00	6.45	0.00	2.06	0.00	0.00	0.00	1.97	0.00	0.00	2.47	11.40	0.00	0.00	0.00	0.00	0.00	0.00	16.75	0.00	3.15	6.25	0.00
72	ER12b	ExonRegion	0	53.30	63.60	46.45	27.26	64.46	69.18	29.49	82.97	16.39	35.97	166.58	115.71	84.85	239.93	198.87	151.31	216.06	33.43	78.19	49.71	66.51	108.53	77.95
73	ER13a	ExonRegion	0	64.73	45.19	47.84	19.14	63.03	82.85	29.57	82.08	24.51	47.26	209.26	76.73	123.11	191.17	173.83	126.60	212.17	41.04	48.18	45.15	52.00	90.34	73.05
74	E13a_E14a	KnownJunction	0	81.20	64.73	49.91	26.10	59.42	67.69	34.89	92.75	29.14	57.78	203.74	75.17	134.57	172.29	184.56	126.89	182.42	40.00	42.07	50.81	42.94	87.93	64.28
75	E13a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
76	E14_Aa	NovelBoundary	0	13.41	0.00	0.00	0.00	0.00	0.00	1.63	4.44	1.56	2.71	4.95	25.21	6.33	0.00	4.45	4.36	4.02	8.00	0.00	0.00	0.00	7.84	3.16
77	ER14a	ExonRegion	0	85.66	78.63	41.56	27.16	56.75	89.37	32.49	86.04	23.93	46.34	212.43	170.41	193.72	202.02	208.77	123.59	208.97	35.52	68.53	54.23	46.92	106.26	52.86
78	E14a_E15a	KnownJunction	0	152.62	114.78	39.86	29.30	86.84	132.71	37.94	101.82	25.32	48.16	258.17	98.88	193.33	204.37	248.22	130.99	259.65	19.32	36.05	43.78	46.89	107.83	47.21
79	ER15a	ExonRegion	0	101.43	121.44	31.94	16.99	55.06	119.27	31.73	96.26	27.80	55.87	224.10	75.90	107.09	151.12	137.30	90.13	184.00	16.62	38.63	36.32	46.36	98.07	47.36
80	E15_Da	KnownBoundary	1	161.21	130.17	22.74	25.90	48.47	134.52	61.47	89.79	21.21	43.92	233.06	42.46	109.08	184.94	135.98	117.15	159.61	25.04	49.88	46.92	38.36	116.34	46.52
81	ER15b	ExonRegion	0	83.46	77.44	11.62	14.33	35.15	83.66	43.19	50.64	11.48	24.70	161.21	155.98	153.25	146.74	150.00	73.18	136.76	23.07	25.31	28.64	27.64	99.11	33.49
82	E15_Db	KnownBoundary	1	33.04	31.64	0.00	0.00	13.58	35.77	23.19	0.00	0.00	1.37	40.59	199.26	134.24	76.05	104.58	19.57	73.77	5.60	4.33	5.43	8.83	50.82	11.18
83	ER15c	ExonRegion	1	40.05	35.80	8.65	5.35	19.13	32.35	17.59	39.30	10.93	15.95	60.94	93.78	88.93	75.05	42.64	38.53	56.43	7.77	14.42	9.03	9.15	42.22	26.43
84	E15_Dc	KnownBoundary	0	119.43	115.64	20.73	11.25	60.87	56.79	42.75	89.09	25.14	35.40	139.93	76.83	152.26	168.70	94.07	99.97	113.14	10.03	32.94	18.47	24.15	89.28	66.75
85	ER15d	ExonRegion	0	182.58	107.88	24.47	14.95	80.81	86.71	42.32	118.60	27.40	47.08	137.53	52.24	166.18	144.82	80.56	77.18	105.08	13.80	45.29	22.20	23.87	77.92	56.97
86	E15_Dd	KnownBoundary	0	224.56	119.52	26.31	20.41	82.43	109.03	47.74	123.76	24.91	52.81	80.65	93.78	214.76	142.50	62.92	58.70	114.07	15.63	62.97	27.48	36.14	61.29	54.80
87	ER15e	ExonRegion	0	53.07	76.71	28.26	16.57	42.99	65.09	21.58	89.55	25.22	36.22	66.28	45.31	78.94	96.95	65.59	60.24	86.96	16.33	35.43	25.64	25.12	54.49	37.11
88	E15_De	KnownBoundary	0	26.00	13.75	11.24	13.52	23.94	22.37	3.80	33.97	11.49	18.19	16.85	11.70	35.22	11.89	4.45	8.37	30.57	1.74	13.84	9.46	0.00	20.08	4.35
89	ER15f	ExonRegion	0	8.51	14.41	8.87	4.06	10.33	12.81	5.17	26.08	6.86	9.41	5.09	8.36	11.24	10.15	6.82	5.97	8.39	1.73	3.75	3.86	1.35	6.82	3.49