Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	CDKN2A	Gene	0	3.22	2.91	10.77	1.30	11.65	3.07	0.12	0.56	2.12	0.63	9.21	7.56	9.85	24.42	92.95	27.25	14.04	7.12	0.53	8.80	145.20	11.36	12.45
2	498628	Transcript	0	0.00	0.00	0.00	0.00	0.77	2.86	0.00	0.00	0.00	0.00	1.11	0.00	0.00	2.11	0.97	1.88	0.00	0.00	0.00	0.00	8.86	1.04	0.00
3	494262	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.18	0.00	0.00	0.00	0.00	0.00	0.00	9.95	0.00	0.00
4	470819	Transcript	0	2.09	0.46	0.60	0.33	1.21	0.04	0.08	0.00	0.72	0.14	2.19	2.61	3.65	3.04	3.89	2.97	2.39	2.70	0.00	2.56	6.06	1.28	0.42
5	361570	Transcript	0	8.50	4.73	24.09	1.34	8.94	4.14	0.10	0.19	2.76	1.37	19.62	5.41	20.31	71.44	313.35	88.34	41.45	22.83	4.47	21.93	243.00	14.28	12.28
6	304494	Transcript	0	0.52	3.08	6.03	0.67	7.74	2.44	0.00	0.27	0.40	1.28	2.05	11.84	2.44	6.36	15.56	4.80	0.24	0.81	0.33	3.25	53.81	4.95	9.34
7	446177	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	498124	Transcript	0	0.36	0.35	1.24	0.30	1.67	0.31	0.00	0.00	0.00	0.00	0.63	0.00	0.00	0.99	2.50	2.18	0.56	1.13	0.27	0.94	12.34	0.78	1.00
9	380151	Transcript	0	0.39	0.19	0.50	0.19	0.75	0.17	0.00	0.24	0.09	0.32	0.36	1.47	4.04	2.25	4.51	6.23	0.31	1.93	0.00	2.45	16.03	0.88	2.73
10	497750	Transcript	0	2.28	0.36	0.33	0.44	3.67	0.00	0.00	0.22	0.59	0.00	0.54	1.02	2.26	2.21	5.26	4.78	0.91	0.91	0.00	1.06	12.56	2.11	1.98
11	380150	Transcript	0	3.14	0.00	0.52	0.40	2.48	0.24	0.00	0.00	0.12	0.05	1.38	0.01	1.21	1.53	8.13	1.23	1.02	0.21	0.01	1.09	14.25	2.26	2.96
12	479692	Transcript	0	0.72	0.00	1.65	0.00	0.61	0.62	0.00	0.28	0.83	0.19	0.66	0.40	0.88	1.25	3.61	1.68	0.75	0.83	0.36	1.93	8.21	0.24	1.33
13	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	1.54	3.33	0.00	0.00	0.00	0.00	2.23	0.00	0.00	1.57	1.93	0.00	0.00	0.00	0.00	0.00	8.81	2.08	0.00
14	E1_Ab	KnownBoundary	0	3.33	0.00	0.00	0.00	4.16	7.89	0.00	2.55	0.00	0.00	9.48	0.00	0.00	5.65	5.19	11.45	12.90	2.45	8.19	0.00	23.54	5.76	3.84
15	ER1b	ExonRegion	0	0.00	0.06	0.14	0.00	1.37	1.54	0.17	0.33	0.00	0.00	1.57	0.00	0.00	3.31	5.19	2.42	0.21	0.61	0.00	0.27	7.48	1.83	1.13
16	E1_Ac	KnownBoundary	0	0.00	0.00	1.83	0.00	7.47	13.69	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.65	4.45	21.45	4.77	2.11	0.00	0.00	14.76	5.39	0.00
17	ER1c	ExonRegion	0	0.16	1.56	0.71	0.00	1.70	2.36	0.00	0.00	0.00	0.00	1.86	0.25	0.00	3.78	3.74	12.97	1.84	2.52	0.00	0.08	13.56	1.20	0.00
18	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E1a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	E1a_E6c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	2.38	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.65	0.00	3.76	0.00	0.00	0.00	0.00	8.90	0.00	0.00
21	ER2a	ExonRegion	0	3.14	2.94	13.31	0.88	5.90	2.83	0.19	0.37	2.56	1.10	15.54	3.16	6.38	33.28	179.20	48.33	36.70	13.58	1.04	14.01	198.73	9.52	12.87
22	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.79	0.00	7.74	0.00	0.00	14.36	8.90	16.41	0.00	3.61	0.00	0.00	30.46	5.02	0.00
23	E2a_E6c	KnownJunction	0	13.85	6.51	34.86	1.80	11.97	5.45	0.00	0.00	2.95	1.64	23.69	7.65	34.25	109.60	447.49	128.34	46.19	32.08	7.91	29.85	287.26	19.04	11.69
24	E3_Aa	NovelBoundary	0	3.41	2.50	0.00	0.00	0.00	0.00	0.00	0.00	1.79	0.00	2.26	5.70	15.10	5.47	10.75	3.93	4.77	2.36	0.00	3.00	20.08	3.12	4.35
25	ER3a	ExonRegion	0	2.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.93	0.00	0.00	4.33	8.79	2.33	3.08	0.19	3.30	0.00	0.00	4.12	3.17	1.69	0.00
26	ER3b	ExonRegion	0	4.16	0.00	0.54	1.21	3.19	0.00	0.00	0.00	1.01	0.00	8.65	7.87	9.46	12.67	23.72	13.42	9.48	5.48	0.00	6.57	25.01	4.81	3.50
27	E3_Da	NovelBoundary	0	22.89	0.00	1.83	1.40	0.00	2.90	0.00	0.00	1.79	0.00	7.37	0.00	13.47	9.54	23.24	4.36	8.51	6.84	0.00	19.24	38.61	0.00	3.33
28	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	E3a_E6c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.35	0.00	0.00	0.00	0.00	0.00	0.00	19.89	0.00	0.00
30	Ix	Intron	0	3.25	1.42	1.21	0.71	3.56	0.70	0.27	0.29	1.31	0.51	5.29	14.31	18.00	8.28	7.55	8.05	4.60	4.90	0.40	5.29	13.18	2.90	2.19
31	Ix_SR1	SilentIntronRegion	0	2.94	1.39	1.13	0.67	3.57	0.65	0.28	0.23	1.33	0.56	5.09	15.10	19.03	8.37	7.28	7.16	4.44	4.12	0.39	4.98	11.60	2.93	2.07
32	Ix_AR1	ActiveIntronRegion	0	6.03	1.62	1.98	1.03	3.48	1.12	0.21	0.82	1.16	0.06	7.16	7.18	8.79	7.56	10.06	16.15	6.01	12.09	0.51	8.12	27.64	2.62	3.28
33	E4_Aa	NovelBoundary	0	6.82	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.26	0.00	0.00	12.07	0.00	3.50	0.00	8.21	0.00	8.25	8.90	3.06	3.67
34	ER4a	ExonRegion	0	6.10	1.84	2.40	1.34	4.85	0.15	0.33	0.00	1.97	0.56	8.76	6.11	5.80	9.82	12.47	8.28	6.26	10.82	0.00	6.14	21.07	3.43	1.69
35	E4_Da	NovelBoundary	0	10.74	3.35	2.72	0.00	10.87	0.00	0.00	4.11	4.22	0.00	11.00	18.91	26.95	14.66	22.25	8.72	0.00	6.43	0.00	8.76	8.03	11.39	7.77
36	Ix_SR3	SilentIntronRegion	0	11.39	5.57	3.33	1.67	13.91	1.34	0.97	1.41	2.85	0.78	8.46	19.94	17.14	6.65	12.21	10.30	7.53	2.27	0.00	7.38	9.65	3.61	0.80
37	Ix_AR4	ActiveIntronRegion	0	6.52	0.70	1.56	0.69	4.12	2.51	0.45	0.88	0.94	0.58	7.94	13.26	6.77	4.02	7.21	5.09	3.39	1.10	0.00	4.73	6.79	2.50	2.01
38	Ix_AR3	ActiveIntronRegion	0	1.32	1.67	1.27	0.15	7.85	0.32	0.70	1.07	2.08	0.30	4.07	20.61	21.90	9.33	7.05	11.49	9.72	3.30	0.00	8.09	42.59	6.18	5.92
39	Ix_AR2	ActiveIntronRegion	0	0.00	6.10	0.35	1.36	13.38	1.05	0.00	1.48	2.47	1.15	7.73	9.28	20.10	10.90	13.26	0.00	9.90	3.96	0.00	14.89	57.93	5.66	6.29
40	Ix_AR1	ActiveIntronRegion	0	0.00	5.62	0.00	1.36	13.76	1.83	0.00	0.00	2.82	1.15	7.00	16.70	21.22	8.97	15.47	1.13	11.79	3.70	0.00	12.26	54.99	5.06	8.81
41	ER5a	ExonRegion	0	0.00	0.00	4.47	0.00	0.58	0.00	0.00	0.00	0.00	1.09	1.77	0.00	2.81	6.12	10.64	1.73	0.33	0.00	0.00	1.49	68.06	0.24	15.42
42	E5_Ab	KnownBoundary	0	0.00	0.00	9.17	0.00	3.65	0.00	0.00	0.00	1.74	1.37	4.11	0.00	6.17	11.95	12.61	4.36	0.00	0.00	0.00	2.62	103.29	0.00	18.69
43	ER5b	ExonRegion	0	0.00	0.60	3.89	0.00	3.03	1.62	0.00	0.00	0.00	0.13	1.66	1.05	2.47	4.53	17.04	6.77	2.04	0.00	0.00	1.99	82.71	2.38	9.45
44	E5_Ac	KnownBoundary	0	0.00	0.00	4.08	0.00	3.23	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.12	9.77	46.60	3.85	8.88	1.70	0.00	0.00	104.22	0.00	42.85
45	ER5c	ExonRegion	0	1.47	0.00	5.03	1.36	5.97	1.69	0.00	0.00	0.29	0.00	0.00	0.00	4.81	8.75	62.41	10.59	5.33	0.00	0.00	1.69	210.14	2.88	24.32
46	E5_Ad	KnownBoundary	0	3.41	0.00	7.81	2.06	14.26	5.68	0.00	0.00	1.13	0.00	0.00	0.00	6.82	9.06	108.04	16.92	11.97	0.00	0.00	5.43	368.07	7.59	26.38
47	ER5d	ExonRegion	0	0.34	0.00	3.92	0.41	3.83	0.81	0.00	0.00	1.19	0.00	0.66	0.00	4.22	6.37	50.72	9.02	7.16	0.77	0.00	3.58	225.96	5.12	9.83
48	E5_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.79	0.00	0.00	0.00	6.82	0.00	4.45	7.35	0.00	1.87	0.00	3.20	26.56	3.12	0.00
49	E5a_E6c	KnownJunction	0	0.00	0.00	16.44	1.30	0.00	0.00	0.00	0.00	2.98	0.00	0.00	0.00	6.01	7.18	58.97	4.10	0.00	0.00	0.00	2.43	454.31	13.47	7.00
50	ER5e	ExonRegion	0	0.79	0.38	0.99	0.38	1.49	0.34	0.00	0.48	0.18	0.64	0.72	2.94	8.08	4.50	9.02	12.45	0.63	3.86	0.00	4.91	32.05	1.76	5.47
51	E5b_E6c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
52	Ix_AR2	ActiveIntronRegion	0	1.58	3.29	0.68	1.99	17.10	1.14	0.33	0.32	2.29	0.00	1.31	12.63	16.69	5.05	10.38	3.60	3.28	1.83	0.00	5.94	8.42	3.00	2.95
53	E6_Aa	NovelBoundary	0	2.82	3.35	3.22	1.66	0.00	0.00	0.00	0.00	2.98	0.00	4.53	0.00	0.00	2.47	62.92	8.72	0.00	0.00	0.00	0.00	52.45	0.00	6.91
54	ER6a	ExonRegion	0	6.26	0.00	0.00	1.32	9.54	0.00	0.00	0.00	0.00	0.00	0.00	3.07	5.71	4.59	6.31	8.66	0.00	0.00	0.00	1.42	15.87	4.62	4.34
55	E6_Da	NovelBoundary	0	0.00	0.00	2.93	0.00	4.16	0.00	0.00	0.00	0.00	0.00	0.00	0.00	12.66	0.00	0.00	3.50	0.00	0.00	0.00	0.00	14.64	8.21	0.00
56	E6a_E6c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
57	ER6b	ExonRegion	0	0.00	0.00	0.00	1.36	7.14	0.00	0.00	0.00	0.00	0.00	0.00	2.89	0.00	5.96	1.93	2.97	0.00	0.00	0.00	2.13	8.08	2.08	0.00
58	ER6c	ExonRegion	0	9.43	0.00	1.56	1.21	7.45	0.71	0.00	0.00	0.35	0.16	2.56	0.04	3.64	4.60	19.35	3.68	0.35	0.63	0.03	3.27	32.05	6.77	6.41
59	E6_Ac	KnownBoundary	0	11.04	0.00	7.10	1.96	7.39	2.27	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.90	0.00	0.00	2.03	0.00	10.80	39.72	5.27	11.69
60	ER6d	ExonRegion	0	6.00	10.41	56.21	4.06	36.76	13.99	0.44	1.34	8.25	1.47	34.34	22.02	43.93	126.59	543.37	120.19	57.81	28.63	3.04	35.63	738.21	44.42	56.12
61	E6_Db	KnownBoundary	0	0.00	0.00	0.00	0.00	3.82	0.00	0.00	0.00	2.84	0.00	0.00	0.00	0.00	2.35	10.14	0.00	0.00	2.40	0.00	0.00	7.54	0.00	0.00
62	E6b_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
63	E6b_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
64	E6b_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
65	E6b_E10a	KnownJunction	0	0.00	17.56	77.73	8.69	124.28	18.00	0.00	5.18	12.70	1.32	69.12	36.16	33.44	271.65	1059.52	319.23	117.62	29.22	0.00	37.01	1084.07	179.11	124.80
66	ER6e	ExonRegion	0	0.58	1.09	1.00	0.00	1.47	0.00	0.00	0.66	1.78	0.00	1.61	0.00	1.06	2.04	9.47	5.67	2.72	2.73	0.00	1.75	21.80	1.71	1.61
67	E7_Aa	NovelBoundary	0	0.00	3.22	4.70	0.00	7.81	0.00	0.00	0.00	3.56	0.00	2.68	0.00	0.00	7.12	8.90	15.12	0.00	1.91	0.00	3.26	45.78	5.57	18.61
68	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.59	0.00	0.00	0.00	5.05	0.00	2.72	0.00	0.00	0.00	10.70	0.00	2.46
69	E7_Da	NovelBoundary	0	2.96	3.22	8.72	0.00	15.79	0.00	0.00	0.00	1.79	0.00	2.58	0.00	13.64	2.47	4.45	0.00	0.00	5.93	0.00	0.00	57.89	0.00	0.00
70	ER8a	ExonRegion	0	1.44	0.00	3.29	0.00	1.21	1.25	0.00	0.56	1.67	0.39	1.31	0.81	1.75	2.49	7.22	3.37	1.50	1.67	0.72	3.86	16.42	0.47	2.66
71	E9_Aa	NovelBoundary	0	3.63	0.00	2.87	4.06	10.87	12.27	0.00	0.00	0.00	0.00	0.00	0.00	6.49	2.47	20.27	19.74	0.00	4.10	0.00	3.26	65.24	2.69	7.77
72	ER9a	ExonRegion	0	0.00	0.00	0.00	0.32	3.87	0.00	0.00	0.00	0.00	0.00	0.16	0.00	0.00	0.90	11.85	2.28	0.00	1.73	1.76	0.95	16.69	1.82	0.00
73	E9_Da	KnownBoundary	0	0.00	0.00	0.00	1.40	8.15	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.00	17.80	4.19	0.00	2.45	4.80	3.07	22.24	2.51	0.00
74	ER9b	ExonRegion	0	0.72	0.69	2.48	0.59	3.34	0.62	0.00	0.00	0.00	0.00	1.26	0.00	0.00	1.97	4.99	4.36	1.12	2.27	0.53	1.87	24.68	1.56	2.00
75	E9b_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
76	ER10a	ExonRegion	0	2.60	15.50	83.71	8.53	57.86	11.09	0.00	6.97	12.76	3.82	58.05	24.49	41.36	148.41	492.12	131.31	115.91	19.45	1.83	51.17	1160.63	80.44	60.32
77	E10_Da	KnownBoundary	0	3.41	9.41	43.79	5.66	11.46	14.48	0.00	4.44	6.71	0.00	14.48	12.60	6.49	16.60	32.26	28.03	39.08	2.57	4.42	18.22	391.11	14.21	7.60
78	E10_Db	KnownBoundary	0	10.96	3.29	13.01	0.00	33.70	5.34	0.00	0.00	6.97	0.00	20.06	17.86	39.45	32.26	107.55	51.87	18.33	6.26	4.52	15.08	243.96	34.11	8.02
79	ER10b	ExonRegion	0	6.35	12.20	65.56	8.18	40.14	12.84	0.00	6.91	14.82	4.59	46.39	43.29	93.80	131.55	430.84	92.14	70.97	9.24	3.19	47.87	857.24	56.26	26.43
80	ER10c	ExonRegion	0	18.26	19.68	56.04	6.57	81.55	17.17	0.00	3.02	10.98	2.49	49.49	44.83	67.82	134.17	472.39	193.43	66.47	19.71	1.67	34.44	697.53	93.94	92.46
81	E10_Dc	KnownBoundary	0	6.22	5.46	56.06	12.89	48.98	17.32	0.00	6.24	7.58	1.10	20.90	72.02	26.62	47.32	196.80	34.52	35.34	7.71	4.52	11.44	224.44	45.07	23.99
82	ER10d	ExonRegion	0	4.09	12.38	33.15	6.02	121.01	17.10	0.00	4.05	4.56	1.15	14.73	48.07	28.06	65.16	159.97	30.28	19.98	4.84	0.00	19.00	119.11	32.40	17.52
83	E10_Dd	KnownBoundary	0	6.00	3.35	8.13	3.06	70.63	24.36	0.00	0.00	0.00	0.00	2.21	36.16	13.64	24.25	35.60	4.36	8.42	1.70	0.00	15.60	56.59	17.51	12.21
84	ER10e	ExonRegion	0	1.05	6.15	7.59	1.34	14.91	4.87	0.00	0.54	0.80	1.46	2.33	23.68	2.07	6.60	20.47	7.87	0.15	1.61	0.66	5.00	39.56	9.66	3.27