Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SMU1 Gene 0 56.15 99.20 54.22 51.09 77.34 47.83 71.83 64.22 64.47 91.97 128.78 122.69 93.55 128.10 111.55 111.61 112.49 52.71 54.84 68.17 52.52 77.67 58.50 2 397149 Transcript 0 102.15 182.77 130.33 116.67 167.62 136.22 196.25 157.51 154.61 259.62 397.74 355.58 303.82 436.37 307.48 345.76 364.45 161.38 156.32 184.34 175.40 199.21 162.78 3 IG47_AR1 ActiveIntergenicRegion 0 0.00 5.06 0.00 0.00 1.66 0.00 3.02 0.00 0.00 0.00 13.06 0.00 0.00 4.04 15.92 11.09 4.11 0.00 6.84 5.29 9.57 2.59 0.00 4 ER1a ExonRegion 1 71.47 146.47 34.36 39.44 65.54 95.21 166.91 65.41 73.87 149.96 199.59 18.05 34.35 291.27 247.21 265.91 313.59 36.69 92.50 169.88 136.29 121.03 133.75 5 E1a_E2a KnownJunction 0 61.64 136.75 61.00 73.82 114.18 83.13 152.76 133.08 146.53 278.83 145.46 95.43 68.18 184.30 94.44 226.52 261.34 73.08 57.23 204.28 99.15 73.66 84.42 6 E1a_E4a NovelJunction 0 3.78 0.00 0.00 2.00 0.00 0.00 0.00 1.93 3.41 1.45 2.68 0.00 0.00 0.00 0.00 0.00 14.03 0.00 0.00 0.00 3.15 2.88 4.35 7 ER2a ExonRegion 1 20.67 49.98 60.23 66.73 41.62 37.52 42.58 113.96 114.29 216.96 365.05 126.64 55.52 269.82 193.61 243.90 403.08 127.36 99.80 174.24 201.38 132.01 122.68 8 E2a_E3a KnownJunction 0 18.52 88.08 88.76 90.07 171.73 165.98 192.86 126.14 144.44 228.25 331.40 294.70 150.96 382.01 194.82 380.50 330.43 254.28 171.58 215.46 255.57 152.04 129.58 9 ER3a ExonRegion 0 51.79 182.89 103.28 87.94 121.58 164.95 199.19 134.15 143.39 234.31 417.18 226.66 194.44 447.63 254.68 336.49 419.39 225.35 143.61 192.56 254.78 186.85 142.61 10 E3a_E4a KnownJunction 1 62.16 195.43 154.67 84.04 47.62 88.36 90.00 154.93 141.00 270.34 316.71 120.19 50.81 545.41 175.78 249.08 376.06 233.67 169.70 158.39 212.45 167.23 122.24 11 I3_SR1 SilentIntronRegion 0 8.24 11.03 13.65 5.92 7.48 1.78 15.63 14.24 7.40 7.48 3.25 9.39 14.66 3.23 10.02 5.88 5.63 3.64 5.61 6.19 1.70 3.87 5.17 12 ER4a ExonRegion 0 72.59 154.22 95.82 72.83 74.49 77.10 107.28 133.17 122.11 220.75 435.95 236.25 229.22 472.71 257.40 326.24 409.85 213.82 147.16 183.84 266.09 191.59 155.88 13 E4a_E5a KnownJunction 0 102.76 143.00 89.09 70.25 120.37 69.34 140.66 145.28 126.59 187.66 376.94 215.32 260.21 409.44 351.20 347.43 372.14 238.65 176.95 175.90 223.08 183.52 108.16 14 ER5a ExonRegion 0 83.35 147.68 111.20 98.96 131.48 104.63 164.22 155.92 145.63 245.30 453.84 268.23 297.65 501.75 281.31 427.20 405.58 232.70 187.57 192.71 231.51 214.70 192.95 15 E5a_E6a KnownJunction 0 71.72 186.81 135.18 129.62 92.02 88.98 218.34 216.21 175.72 307.25 512.92 512.42 410.85 587.91 340.81 443.82 459.37 191.64 188.62 209.65 228.08 359.81 254.21 16 ER6a ExonRegion 0 128.63 227.61 140.94 135.87 146.76 170.02 209.09 187.54 189.67 300.49 502.68 396.25 468.85 549.93 341.38 403.57 452.28 189.29 163.99 213.51 181.93 244.28 217.02 17 E6a_E7a KnownJunction 0 109.43 247.19 154.73 159.49 192.95 255.48 354.98 221.35 178.82 317.08 512.97 399.13 450.46 427.81 332.65 449.63 437.12 155.91 185.70 236.69 156.54 238.38 201.97 18 ER7a ExonRegion 0 105.97 243.54 150.95 137.44 238.26 182.94 295.80 202.20 204.73 318.68 486.66 498.67 526.17 482.79 339.10 428.29 418.20 155.02 194.39 233.35 161.55 263.25 201.77 19 E7a_E8a KnownJunction 0 123.36 299.03 194.97 196.08 319.44 217.37 344.56 211.74 229.66 370.88 547.09 647.46 712.62 711.11 559.86 524.99 446.84 140.57 242.74 229.21 199.36 306.29 242.94 20 E8_Aa NovelBoundary 0 26.00 56.44 4.70 4.93 59.59 57.58 105.50 1.85 1.79 4.00 131.24 76.52 133.60 46.27 38.57 102.02 120.52 8.08 33.41 65.64 67.46 97.91 36.62 21 ER8a ExonRegion 0 88.40 228.67 166.86 176.66 193.57 165.40 217.44 181.02 216.97 339.55 511.49 541.49 495.05 469.38 342.23 338.50 453.98 138.22 165.59 212.13 165.64 257.53 161.17 22 E8a_E9a KnownJunction 0 185.74 211.34 214.69 198.74 322.58 308.97 360.68 199.50 223.93 378.03 453.96 327.41 334.88 346.28 232.65 259.08 278.17 131.32 124.80 132.82 111.45 208.75 152.20 23 ER9a ExonRegion 0 187.82 277.75 177.19 174.23 309.56 250.09 309.49 188.80 210.51 300.07 504.87 607.80 587.18 575.49 435.26 406.55 469.56 161.74 228.02 198.58 123.72 267.22 203.11 24 E9_Da NovelBoundary 1 20.30 69.40 18.78 19.44 31.32 10.96 50.39 40.87 31.02 30.43 20.90 62.27 54.54 23.90 23.61 34.26 24.22 12.73 29.46 45.38 7.78 36.19 30.22 25 E9a_E10a KnownJunction 0 214.93 150.63 149.76 139.01 239.22 138.16 171.26 165.12 152.75 256.48 355.83 556.53 408.09 453.41 365.54 357.00 316.88 123.20 153.13 153.08 117.01 184.68 172.69 26 E9a_E11a NovelJunction 0 3.78 0.00 5.59 1.60 12.48 0.00 2.25 0.00 0.00 6.98 0.00 6.30 12.99 10.36 4.45 4.36 3.74 2.03 0.00 0.00 0.00 0.00 0.00 27 I9 Intron 0 28.70 43.47 26.13 28.18 34.98 18.09 47.11 32.06 32.73 37.77 21.26 42.60 40.71 39.71 35.21 33.17 25.71 26.63 25.41 41.40 11.99 28.81 27.71 28 I9_SR1 SilentIntronRegion 0 2.63 28.14 3.11 7.74 11.50 19.78 23.40 7.99 9.01 4.90 6.48 24.10 12.30 24.58 12.70 5.54 8.30 10.54 10.59 18.57 1.31 10.92 20.16 29 I9_AR1 ActiveIntronRegion 0 23.19 41.55 21.96 31.13 29.36 22.75 52.06 30.48 37.55 34.00 24.87 45.08 37.18 36.66 35.85 32.04 31.39 26.04 26.72 50.12 12.27 26.10 30.25 30 I9_SR2 SilentIntronRegion 1 29.52 35.39 14.19 18.02 32.75 18.20 48.80 29.13 33.88 32.77 12.39 69.25 56.88 31.28 24.16 17.45 8.12 10.40 12.10 30.81 1.18 37.38 9.66 31 I9_AR2 ActiveIntronRegion 0 38.71 46.04 34.70 34.36 36.55 17.75 48.14 39.49 36.93 48.08 26.40 40.50 47.40 51.85 44.50 48.23 35.60 39.90 35.91 51.72 18.07 33.68 38.60 32 I9_SR3 SilentIntronRegion 0 15.93 46.75 22.20 20.11 41.72 13.56 41.11 22.46 20.42 26.63 13.28 30.65 24.02 24.28 23.92 14.92 10.90 10.68 11.36 18.82 6.40 18.44 13.58 33 E10_Aa NovelBoundary 1 34.45 95.64 40.54 38.79 76.91 7.89 80.64 43.25 39.44 35.65 7.26 73.22 66.39 18.95 28.56 15.21 8.70 16.50 17.79 40.33 15.44 34.60 22.11 34 ER10a ExonRegion 0 163.75 214.25 176.15 153.70 271.70 155.35 188.22 173.64 170.61 266.16 411.72 560.38 397.68 562.19 396.94 398.80 365.55 183.53 195.29 172.18 187.51 213.45 214.06 35 E10_Da NovelBoundary 0 9.71 16.44 15.82 20.61 8.06 14.42 36.88 10.39 25.06 11.82 2.58 11.70 6.82 4.65 4.45 8.20 8.42 14.43 13.65 20.13 23.10 2.82 8.71 36 E10a_E11a KnownJunction 0 117.65 178.32 166.46 119.00 191.00 92.84 188.35 174.89 131.31 233.27 388.36 609.05 485.20 496.32 449.23 376.23 282.00 171.16 196.90 170.91 178.23 165.21 158.26 37 I10 Intron 0 12.91 24.89 15.08 18.76 19.38 15.92 22.21 19.97 17.62 24.18 8.03 13.84 11.71 9.64 9.61 11.71 8.39 16.12 13.76 16.13 10.36 14.82 16.18 38 I10_SR1 SilentIntronRegion 0 11.40 24.72 15.19 18.78 19.57 15.99 22.72 20.33 17.41 24.45 8.03 13.85 10.74 10.04 8.75 11.28 8.21 16.55 14.83 16.83 10.69 15.32 16.28 39 I10_AR1 ActiveIntronRegion 0 27.20 27.88 15.01 19.49 18.80 16.18 18.89 17.79 20.54 23.09 8.44 14.54 21.07 6.65 17.82 16.12 10.45 12.98 4.99 10.69 7.93 11.15 16.15 40 E11_Aa NovelBoundary 1 51.79 51.37 23.71 44.72 51.44 34.07 45.13 36.93 15.68 35.30 10.16 5.25 13.64 10.60 20.40 40.84 8.42 16.83 30.68 17.64 21.81 13.72 13.91 41 ER11a ExonRegion 0 127.46 198.41 175.32 138.10 173.94 97.73 150.43 162.87 139.76 246.16 407.53 441.21 225.15 469.80 394.57 369.71 329.36 156.12 154.90 164.71 178.01 197.50 187.62 42 E11_Da NovelBoundary 0 0.00 21.77 12.68 7.03 10.95 0.00 0.00 22.84 7.32 3.20 2.68 0.00 6.82 0.00 5.81 0.00 4.02 5.51 3.58 5.37 2.90 0.00 11.35 43 E11a_E12a KnownJunction 1 134.69 218.58 161.35 107.98 220.37 98.24 205.14 135.87 134.03 257.04 460.75 419.39 108.60 359.82 433.90 346.32 346.52 156.36 128.38 210.03 149.62 209.17 157.07 44 ER12a ExonRegion 0 45.01 77.08 34.68 33.47 55.32 25.28 43.48 40.06 39.77 47.69 48.97 59.72 35.77 40.03 57.57 46.74 35.05 21.98 26.79 35.81 15.33 43.59 27.67 45 IG46 Intergenic 0 8.69 14.10 21.32 12.79 7.81 3.18 6.64 10.57 11.59 9.83 2.65 10.11 3.80 2.04 4.86 5.69 6.02 2.52 6.68 6.99 2.01 3.62 8.57 46 IG46_SR3 SilentIntergenicRegion 0 11.72 15.58 20.40 9.91 7.60 2.14 6.05 7.62 11.53 7.67 3.77 8.85 5.15 1.78 3.64 7.25 4.35 2.86 8.38 7.81 2.65 3.17 8.72 47 IG46_AR2 ActiveIntergenicRegion 0 6.70 5.42 37.99 26.12 5.35 3.67 13.68 12.10 18.32 14.91 6.44 11.55 4.69 4.33 5.80 9.41 7.70 0.31 3.19 9.93 4.41 4.17 8.32 48 IG46_SR2 SilentIntergenicRegion 0 6.12 14.14 27.67 20.57 9.57 4.77 7.43 15.83 15.23 14.83 1.38 14.41 2.05 2.00 7.07 4.77 9.74 2.58 6.85 7.93 1.88 5.03 8.04